Data for Metabolomics analysis of multiple metabolic functions in the YjgF/YER057c/UK114 (Rid) protein family GC-MS (Part 1) (Study ST000117)

(Analysis AN000198)

Values for each metabolite have been scaled by dividing by the mean across all factors

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MetaboliteF1F2F3
2,5-dihydroxypyrazine NIST 1.1517 0.7259 1.1224
2^-deoxyguanosine 1.0690 1.0329 0.8981
2-hydroxyglutaric acid 1.6805 0.9649 0.3547
2-hydroxyhexanoic acid 1.5214 1.1187 0.3600
2-isopropylmalic acid 1.4702 1.0524 0.4774
3-phosphoglycerate 0.9038 1.4323 0.6639
adenine 1.2062 0.8891 0.9047
adenosine 1.2298 0.9325 0.8376
adenosine-5-monophosphate 0.9791 1.0476 0.9733
alanine 0.8600 0.9828 1.1572
alanine-alanine 1.4414 0.8669 0.6917
alpha-ketoglutarate 0.8058 1.6588 0.5355
aspartic acid 1.3955 0.5289 1.0756
benzoic acid 1.0009 0.9284 1.0706
beta-alanine 1.1652 1.2239 0.6109
cholesterol 0.9133 1.3102 0.7765
citric acid 0.7082 0.6912 1.6006
cysteine 0.5221 2.2347 0.2432
cysteine-glycine 0.7460 1.6019 0.6522
cytidine-5-monophosphate 0.8405 1.0342 1.1253
cytosin 0.7815 0.8880 1.3305
fructose 0.8239 1.0059 1.1702
fructose-1,6-bisphosphate 0.7338 1.0037 1.2625
fructose-1-phosphate 0.7512 0.9513 1.2974
fructose-6-phosphate 0.6171 0.9722 1.4107
fumaric acid 1.0953 1.0060 0.8987
glucose 0.1656 0.9979 1.8365
glucose-1-phosphate 0.8016 1.1556 1.0428
glucose-6-phosphate 0.6198 0.9615 1.4187
glutamic acid 0.7233 1.1351 1.1415
glutamine 1.2469 0.5966 1.1565
glutathione 0.3913 0.8082 1.8005
glyceric acid 1.0751 1.4138 0.5111
glycerol-alpha-phosphate 0.8639 1.0131 1.1230
glycine 0.6888 1.6746 0.6367
glycolic acid 1.0054 0.9026 1.0920
guanine 0.9862 0.9391 1.0747
guanosine 0.9809 1.0688 0.9502
heptadecanoic acid 0.7799 0.9006 1.3195
hexose-6-phosphate 0.5789 0.9792 1.4419
hexose NIST 0.2149 1.1281 1.6570
hydroxylamine 0.9885 1.0441 0.9674
hypoxanthine 0.9998 1.0471 0.9532
inosine 0.9163 1.1523 0.9314
inosine-5^-monophosphate 1.0102 1.5136 0.4762
isoleucine 1.0882 1.2216 0.6902
lactic acid 1.3644 0.9778 0.6578
lauric acid 0.7887 1.0483 1.1630
levoglucosan 0.9894 0.9820 1.0286
lysine 0.9387 1.1723 0.8890
malic acid 0.9465 1.2079 0.8457
mannose-6-phosphate NIST 0.4088 1.0514 1.5398
methionine 1.0676 1.3390 0.5934
myristic acid 0.9002 0.9932 1.1066
N-acetylgalactosamine 0.9301 0.7753 1.2946
N-acetyl-L-ornithine 0.8034 0.6900 1.5066
nicotinamide 1.2580 1.0183 0.7237
nicotinic acid 0.9438 1.0453 1.0109
N-methylalanine 1.1100 1.1298 0.7602
O-acetylserine 0.9031 1.8636 0.2333
oleic acid 0.8736 0.7303 1.3961
ornithine 4tms 1.0033 1.0148 0.9820
orotic acid 0.7037 0.9590 1.3373
oxoproline 0.8566 1.0215 1.1219
palmitic acid 0.9347 0.9091 1.1562
palmitoleic acid 0.9436 1.0274 1.0289
pelargonic acid 0.9556 0.8480 1.1964
pentadecanoic acid 0.7955 0.9839 1.2206
phenylalanine 0.9324 1.0613 1.0063
phosphate 1.0102 0.9074 1.0824
phosphoenolpyruvate 1.0175 1.4514 0.5312
phosphoethanolamine 1.0163 0.8759 1.1078
proline 0.9595 0.8532 1.1873
propane-1,3-diol NIST 1.0085 0.9725 1.0190
putrescine 0.9494 0.8929 1.1577
pyrophosphate 0.9287 0.9967 1.0746
ribose 0.9683 1.2595 0.7721
ribose-5-phosphate 0.8093 1.3116 0.8791
serine 1.0369 1.3231 0.6400
spermidine 0.6294 1.0957 1.2750
stearic acid 0.8986 0.8352 1.2661
succinic acid 1.0033 1.0858 0.9109
threonine 0.9750 1.1483 0.8767
thymidine 0.9417 1.0940 0.9644
thymidine-5-phosphate 0.7534 0.9701 1.2765
thymine 0.7676 1.0390 1.1933
tryptophan 1.1123 1.3625 0.5251
tyrosine 1.0102 0.9936 0.9962
UDP-glucuronic acid 1.0025 0.9354 1.0621
UDP-N-acetylglucosamine 0.9553 0.8169 1.2278
uracil 0.9218 1.1123 0.9659
urea 1.0732 1.5351 0.3918
uridine-5^-monophosphate 1.0404 1.0232 0.9365
valine 1.0956 0.8247 1.0797
xylulose NIST 0.9069 1.0507 1.0424
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Factors:

F1genotype:single RidA knockout
F2genotype:triple RidA knockout
F3genotype:Wild Type
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