Data for Metabolic contribution of pSymA and pSymB megaplasmid/chromid for multipartite Sinorhizobium meliloti cultured in rich LBmc medium (Study ST000259)
(Analysis AN000411)Values for each metabolite have been scaled by dividing by the mean across all factors Run Hierarchial cluster analysis on this study | Run Heatmap cluster analysis on this studyMetabolite | F1 | F2 | F3 | F4 | F5 | F6 |
---|---|---|---|---|---|---|
2^-deoxycytidine | 0.8993 | 1.1109 | 0.9189 | 0.8811 | 0.8204 | 1.1602 |
2^-deoxyuridine | 0.9762 | 0.9366 | 1.0174 | 0.9011 | 1.0450 | 1.0875 |
adenine | 0.9645 | 0.4606 | 0.5905 | 3.1262 | 3.2252 | 0.5092 |
adenosine | 1.3058 | 0.5527 | 0.7949 | 2.0467 | 2.0576 | 0.6508 |
ala-gln | 1.1505 | 0.6974 | 0.9313 | 1.6700 | 1.6795 | 0.7755 |
ala-gly | 1.1878 | 0.7616 | 0.8290 | 1.7021 | 1.8054 | 0.7201 |
ala-his | 1.1484 | 0.5544 | 1.0311 | 1.9264 | 1.9250 | 0.5672 |
allantoin | 1.5147 | 0.5462 | 1.6417 | 0.7400 | 0.7542 | 0.5302 |
amino-N-valeric acid | 0.6404 | 0.5867 | 1.7440 | 1.7925 | 1.7056 | 0.5509 |
arginine, pos | 1.4631 | 0.5707 | 1.0680 | 1.5539 | 1.5883 | 0.5470 |
cAMP | 0.9677 | 0.8179 | 0.8382 | 1.6156 | 1.6271 | 0.9512 |
choline | 0.5274 | 0.4570 | 0.5029 | 4.0481 | 4.0614 | 0.4224 |
cUMP | 0.9098 | 0.8245 | 0.9554 | 1.6932 | 1.7174 | 0.8326 |
cytidine | 0.8887 | 0.9379 | 0.9611 | 1.3233 | 1.3779 | 0.9702 |
cytosine | 1.1710 | 0.9225 | 0.9878 | 1.0260 | 1.0196 | 0.9122 |
deoxyinosine | 0.9822 | 1.0370 | 0.9002 | 0.9320 | 0.9802 | 1.1034 |
GlcNAc | 0.5818 | 1.4071 | 0.6396 | 0.6626 | 0.6712 | 1.5504 |
glucuronamide | 0.6181 | 1.8802 | 0.6050 | 0.6496 | 0.6805 | 1.0768 |
glutamic acid | 1.3785 | 0.7087 | 1.2803 | 1.1679 | 1.1462 | 0.5644 |
guanine | 1.8169 | 0.2744 | 1.6996 | 0.9995 | 1.0205 | 0.2867 |
histidine | 1.3561 | 0.6925 | 1.4194 | 1.0706 | 1.0988 | 0.5186 |
methionine sulfoxide | 1.1435 | 0.8414 | 1.1422 | 1.0957 | 1.1384 | 0.8107 |
methyl-D-glucoside/mannoside/galactoside | 0.9209 | 1.0809 | 0.9643 | 0.7526 | 0.7679 | 1.1873 |
N-acetyl-aspartic acid | 0.6805 | 1.3557 | 0.6184 | 0.5890 | 0.5900 | 1.5801 |
N-acetyl-glutamic acid | 0.7157 | 1.3812 | 0.9956 | 0.4894 | 0.4860 | 1.2330 |
N-acetyl-tyrosine | 1.0252 | 0.9934 | 1.0176 | 0.9891 | 0.9800 | 0.9763 |
nicotinic acid | 1.0431 | 1.1617 | 0.9999 | 0.3672 | 0.3723 | 1.2179 |
pantothenic acid | 0.5442 | 1.2780 | 1.0508 | 0.2918 | 0.2990 | 1.5742 |
PE36:2 | 0.7582 | 1.5337 | 0.8249 | 0.4998 | 0.4421 | 1.2127 |
proline | 1.4176 | 0.4026 | 1.4105 | 1.4287 | 1.4794 | 0.5126 |
pyridoxine | 0.9833 | 0.9685 | 1.0647 | 0.9488 | 0.9655 | 1.0148 |
serine | 1.1936 | 0.7285 | 1.2538 | 1.0034 | 1.0380 | 0.8352 |
sorbic acid | 1.0180 | 0.9779 | 0.9541 | 0.8700 | 0.8112 | 1.1548 |
taurine | 1.1914 | 0.6748 | 1.1895 | 1.2897 | 1.2098 | 0.7989 |
thiamine | 1.0211 | 0.9395 | 0.9956 | 0.9971 | 1.0316 | 1.0352 |
threonine/homoserine | 1.0136 | 0.9932 | 0.9674 | 1.1258 | 1.0972 | 0.9504 |
tyramine | 1.1893 | 1.0554 | 1.0526 | 1.0968 | 1.1268 | 0.6416 |
Factors:
F1 | strains:ΔpSymAB | time:N/A |
F2 | strains:ΔpSymA | time:N/A |
F3 | strains:ΔpSymB | time:N/A |
F4 | strains:Luria Broth only | time:0 hr |
F5 | strains:Luria Broth only | time:45 hrs |
F6 | strains:wild type | time:N/A |