Study-specific Protocols

These protocols have been submitted in association with experimental studies and projects. Browse and sort the full list of protocols, or use the form to search by keyword or phrase.

Click the File ID to access protocol details, including a list of studies that use that protocol and, for studies that have been released, an option to download the protocol.
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Fields searched: Analysis, Metabolite Class, Sample Type, Process, Institute, Comments (case insensitive)
File ID
Analysis
Metabolite Class
Sample Type
Process
Institute
24NMR Worm metabolites Worm serum Sample prep/NMR University of Florida
95NMR Worm metabolites Worm serum Analysis/NMR University of Florida
209NMR Synthetic metabolites Synthetic metabolites mixture Sample prep/NMR University of Florida
455MS Synechococcus sp CC9605 cells Treatment UCDavis
512MS Synechococcus elongatus (PCC 7942) cells Cells Sample Prep University of California, Davis
513MS Synechococcus elongatus (PCC 7942) cells Cells Collection University of California, Davis
225MS S.enterica and E.coli strain metabolites cells Analysis/MS University of California, Davis
226MS Rattus norvegicus metabolites Sprague-Dawley Maternal: Adrenal, liver, placenta, amniotic fluid Sprague-Dawley Fetal: Male and female brain, male and female liver Sample prep/MS University of California, Davis
381MS Rattus norvegicus metabolites Rat brain tissue Chromatography University of Florida
384MS Rattus norvegicus metabolites Rat brain tissue Sample Prep University of Florida
423MS Rattus norvegicus Plasma and lung Chromatography University of California Davis
491MS Rattus norvegicus Blood collected by heart puncture Treatment University of California, Davis
531MS Rattus norvegicus Intestinal lipid sample prep University of Michigan
309MS Rattus Metabolites plasma Analysis University of Michigan
310MS Rattus Metabolites feces Analysis University of Michigan
275MS Rat metabolites Rat hepatocyte Treatment Mayo Clinic
385MS Rat and human metabolites serum and urine Collection Beijing Institute of Radiation Medicine
386MS Rat and human metabolites serum and urine Sample Prep Beijing Institute of Radiation Medicine
387MS Rat and human metabolites serum and urine Chromatography Beijing Institute of Radiation Medicine
246MS Plant (Zea mays) metabolites Zea mays Sample prep/MS University of Florida
247MS Plant (Zea mays) metabolites Zea mays Sample prep/MS University of Florida
248MS Plant (Zea mays) metabolites Zea mays Sample prep/MS University of Florida
249MS Plant (Zea mays) metabolites Zea mays Sample prep/MS University of Florida
297MS Ovis aries metabolites smooth muscle cells Analysis University of Michigan
68MS Over 1000 primary metabolites below 1000 Da Metabolite reference standards Chromatography/MS UC Davis
484MS Mus musculus tissue antrum, corpus glands Treatment University of California, Davis
311MS Mus Musculus Metabolites feces Analysis University of Michigan
312MS Mus Musculus Metabolites feces Analysis University of Michigan
379MS Mus Musculus metabolites liver, serum Sample Prep Penn State University
232NMR Mus musculus metabolites myocardial endothelial cells (MEC) samples Sample prep/NMR RTI International
238MS Mus musculus metabolites Liver, small and large intestine, and feces SamplePrep/MS Pennsylvania State University
273MS Mus musculus metabolites bone marrow cells Sample prep/MS New York University
282MS Mus musculus metabolites cells Analysis University of Florida
290MS Mus musculus metabolites cells Analysis University of Michigan
295MS Mus musculus metabolites cells Analysis University of Michigan
296MS Mus musculus metabolites cells Analysis University of Michigan
298MS Mus musculus metabolites cells Analysis University of Michigan
299MS Mus musculus metabolites bone marrow cells Analysis University of Michigan
313MS Mus musculus metabolites liver Analysis University of Michigan
315MS Mus musculus metabolites Liver Analysis University of Michigan
316MS Mus musculus metabolites Flushing Analysis University of Michigan
317MS Mus musculus metabolites Cecum Analysis University of Michigan
318MS Mus musculus metabolites Liver and Plasma Analysis University of Michigan
319MS Mus musculus metabolites Liver and Plasma Analysis University of Michigan
320MS Mus musculus metabolites Liver and Plasma Analysis University of Michigan
322MS Mus musculus metabolites Muscles Analysis University of Michigan
323MS Mus musculus metabolites bone marrow cells Analysis University of Michigan
324MS Mus musculus metabolites Face Analysis University of Michigan
326MS Mus musculus metabolites Face Analysis University of Michigan
329MS Mus musculus metabolites plasma Analysis University of Michigan
330MS Mus musculus metabolites cecum Analysis University of Michigan
332MS Mus musculus metabolites Macrophages Analysis University of Michigan
335MS Mus musculus metabolites cells Analysis University of Michigan
337MS Mus musculus metabolites Cecum Analysis University of Michigan
340MS Mus musculus metabolites Cell Line Analysis University of Michigan
341MS Mus musculus metabolites Liver Analysis University of Michigan
342MS Mus musculus metabolites Liver Analysis University of Michigan
227MS Mus musculus metabolites serum, adipose, heart, muscle and liver Sample prep/MS University of California, Davis
527MS Mus musculus/Homo sapiens Plasma and bronchoalveolar lavage fluid (BALF) Chromatography University of Michigan
410MS Mus musculus Blood plasma, Bronchoalveolar Lavage Fluid Analysis University of Michigan
418MS Mus musculus Liver, MFE Cells Analysis University of Michigan
429MS Mus musculus plasma, liver, hypothalmus, muscle, adipose Treatment UC Davis
469MS Mus musculus Cecal contents sample prep UCDavis
473MS Mus musculus small intestine Treatment UCDavis
474MS Mus musculus prostate Treatment UCDavis
479MS Mus musculus serum sample prep UCDavis
482MS Mus musculus hind brain tissue Chromatography University at Buffalo
483MS Mus musculus hind brain tissue Collection University at Buffalo
511MS Mus musculus cytosol, mitochondria Treatment University of California, Davis
534MS Mus musculus glioma cell lines and tumnor tissue sample prep University of Michigan
535MS Mus musculus glioma cell lines and tumnor tissue sample prep University of Michigan
537MS Mus musculus Bone marrow macrophage Collection University of California, Davis
338MS Mus metabolites Faces Analysis University of Michigan
157MS Mouse (Mus musculus) metabolites Lung samples Sample prep/MS RTI International
162MS Mouse (Mus musculus) metabolites feces Sample prep/MS RTI International
163MS Mouse (Mus musculus) metabolites plasma Sample prep/MS University of California, Davis
153MS Mouse (Mus musculus) tissue Sample prep/MS RTI International
154MS Mouse (Mus musculus) urine Sample prep/HILIC-MS RTI International
119NMR Mouse metabolites Frozen fecal samples Sample prep/NMR RTI International
187MS mouse metabolites liver samples Sample Prep University of California, Davis
188MS mouse metabolites liver samples Chromatography University of California, Davis
214MS Mirounga angustirostris metabolites Blood Collection University of California, Davis
215MS Mirounga angustirostris metabolites Blood Collection University of California, Davis
118MS Mice metabolites FLT3-TID/MLL-ENL mice myeloid cells Sample prep/MS RTI International
120MS Mice metabolites plasma Sample prep/MS University of California, Davis
268MS Mice muscle tissue Treatment Mayo Clinic
88NMR Mayfly metabolites Mayfly larvae Sample prep/NMR RTI International
156MS Macaca fascicularis metabolites ovary tissue Sample prep/MS RTI International
160MS Macaca fascicularis (cynomolgus monkeys) metabolites Ovarian samples Sample prep/MS RTI International
14MS Human metabolites Human cells Analysis/LC-MS University of Michigan
16MS Human metabolites Human cells Sample prep/LC-MS University of Michigan
17MS Human metabolites Human cells Analysis/LC-MS University of Michigan
23NMR Human metabolites Human urine Sample prep/NMR RTI International
28NMR Human metabolites Human urine Sample prep/NMR RTI International
32NMR Human metabolites Human urine Sample prep/NMR RTI International
67MS Human metabolites Human muscle Sample prep/MS RTI International
96MS Human metabolites Human plasma Sample prep/LC-MS University of Michigan
102MS Human metabolites Human plasma Analysis/LC-MS University of Michigan
108MS Human metabolites Human breast cancer cells Sample prep/LC-MS University of Michigan
109MS Human metabolites Human breast cancer cells Analysis/LC-MS University of Michigan
116MS Human metabolites Human breast normal/cancer cells Sample prep/LC-MS RTI International
122MS Human metabolites breast cells Sample prep/MS University of California, Davis
130MS Human metabolites Human Fat Tissue Sample prep/MS University of California, Davis
135 Human metabolites CSF Sample prep/MS University of California, Davis
138MS Human metabolites Cell Culture Media Sample prep/GCTOF-MS University of California, Davis
165NMR/MS Human metabolites human A549 cells Sample treatment/MS/NMR University of Kentucky
166NMR/MS Human metabolites human A549 cells Sample collection/MS/NMR University of Kentucky
176MS Human metabolites serum Sample prep/MS University of California, Davis
179NMR/MS Human metabolites human A549 cells Sample prep/MS/NMR University of Kentucky
180NMR/MS Human metabolites human A549 cells Sample prep/MS/NMR University of Kentucky
181NMR/MS Human metabolites human A549 cells Sample prep/MS/NMR University of Kentucky
182MS Human metabolites scalp biopsies Sample prep/MS Case Western Reserve University
213MS Human metabolites Serum Sample Prep University of Michigan
218MS Human metabolites media collection from plate Sample prep/MS University of Kentucky
219MS Human metabolites media collection from plate Sample prep/MS University of Kentucky
222MS Human metabolites media collection from plate Treatment/MS University of Kentucky
223MS Human metabolites media collection from plate Collection/MS University of Kentucky
224MS Human metabolites serum and liver Chromatography Mayo Clinic
228NMR Human metabolites serum Sample prep/NMR RTI International
229NMR Human metabolites Caco-2 cell culture Sample prep/NMR RTI International
231MS Human metabolites Serum Sample prep/MS University of California, Davis
234NMR Human metabolites Serum Sample prep/NMR RTI International
235NMR Human metabolites urine Sample prep/NMR RTI International
236NMR Human metabolites cord blood Sample prep/NMR RTI International
237NMR Human metabolites urine Sample prep/NMR RTI International
239NMR Human metabolites Prostrate cells SamplePrep/NMR Purdue University North Central
241MS Human metabolites Serum Sample prep/MS University of Florida
242MS Human metabolites blood samples Sample prep/MS University of Florida
243MS Human metabolites plasma Sample prep/MS RTI International
244MS Human metabolites plasma Sample prep/MS RTI International
245MS Human metabolites Cells Sample prep/MS University of Florida
251MS Human metabolites cell culture Collection University of Kentucky
252MS Human metabolites cell culture Treatment University of Kentucky
254MS Human metabolites cell culture Sample prep/MS University of Kentucky
261MS Human metabolites cells Acquisition Parameters File University of Michigan
262MS Human metabolites cells Processing Parameters File University of Michigan
263MS Human metabolites cells Sample prep/MS University of Michigan
264MS Human metabolites cells Processing Parameters File University of Michigan
265MS Human metabolites cells Analysis University of Michigan
266MS Human metabolites cells Analysis University of Michigan
267MS Human metabolites cells Analysis University of Michigan
269MS Human metabolites Tissues Sample prep/MS University of Michigan
271MS Human metabolites Serum Sample prep/MS University of Michigan
274NMR/MS Human metabolites blood samples Sample prep/MS Mayo Clinic
278MS Human metabolites cells Analysis University of Michigan
304MS Human metabolites Plasma Analysis University of Michigan
305MS Human metabolites Feces Analysis University of Michigan
306MS Human metabolites Feces Analysis University of Michigan
307MS Human metabolites Feces Analysis University of Michigan
321MS Human metabolites cells Analysis University of Michigan
327MS Human metabolites Bronchoalveolar Lavage Fluid Analysis University of Michigan
344MS Human metabolites cells Analysis University of Michigan
345MS Human metabolites feces Analysis University of Michigan
494MS Human metabolites Tissue slices Treatment University of Kentucky
495MS Human metabolites Tissue slices Collection University of Kentucky
496MS Human metabolites Tissue slices Sample prepration University of Kentucky
508MS Human metabolites Human serum Analysis/LCMS University of California, Davis
190MS human metabolites ovarian cancer cells Chromatorgraphy University of California, Davis
191MS human metabolites ovarian cancer cells Collection University of California, Davis
192MS human metabolites ovarian cancer cells Sample Prep University of California, Davis
193MS human metabolites ovarian cancer cells Sample Prep University of California, Davis
194MS human metabolites ovarian cancer cells Collection University of California, Davis
85NMR Human metabolite Lung cancer cells Sample prep/NMR RTI International
86NMR Human metabolite Human fetal cord blood serum Sample prep/NMR RTI International
87NMR Human metabolite Human infant frozen urine Sample prep/NMR RTI International
79MS Human metaboiltes Human Breast cells Sample prep/MS RTI International
428MS Human Umbilical cord plasma Collection UC Davis
538MS Human Liver tissue Analysis University of California, Davis
546MS Human steatotic liver Analysis University of California, Davis
548MS human lung tissue sample prep UCDavis
550MS human serum Collection University of California, Davis
492MS Homo sapiens metabolites renal tissues samples sample prep University of California, Davis
493MS Homo sapiens metabolites renal tissues samples Treatment University of California, Davis
504MS Homo sapiens metabolites Blood Treatment University of California, Davis
505MS Homo sapiens metabolites Blood Treatment University of California, Davis
518MS Homo sapiens metabolites cells Treatment University of California, Davis
489MS Homo sapiens lung tissue Bronchoalveolar lavage supernatant Treatment University of California, Davis
503MS Homo sapiens cells cells sample prep University of California, Davis
515MS Homo sapiens cells blood Collection University of California, Davis
403MS Homo sapiens feces Analysis University of Michigan
404MS Homo sapiens feces Analysis University of Michigan
405MS Homo sapiens feces Analysis University of Michigan
406MS Homo sapiens Cell Line Analysis University of Michigan
408MS Homo sapiens Plasma Analysis University of Michigan
409MS Homo sapiens Plasma Analysis University of Michigan
475MS Homo sapiens urines Treatment UCDavis
520MS Homo sapiens intestine tissue Chromatography University of Michigan
526MS Homo sapiens Glioblastoma cells analysis University of Michigan
551MS Homo sapiens plasma Collection University of California, Davis
308MS Gallus gallus metabolites intestinal secretions Analysis University of Michigan
519NMR felis catus Exhaled breath condensate and bronchoalveolar lavage fluid sample prep University of Missouri-Columbia
516MS Escherichia coli Cells Collection University of California, Davis
397MS Equus caballus (horse) metabolites Plasma Treatment University of Florida
285MS Ecoli metabolites Ecoli cells Analysis University of Michigan
210NMR Drosophila metabolites whole bodies collection University of Florida
211NMR Drosophila metabolites Whole Bodies Collection University of Florida
212NMR Drosophila metabolites whole bodies Collection University of Florida
398MS Drosophila melanogaster tissues Analysis University of Michigan
490MS Cricetinae serum free from the DG44 CHO cell line Treatment University of California, Davis
517MS Chlorella minutissima plant cells Treatment University of California, Davis
201NMR/MS C.elegans metabolites worm pellets Collection University of Florida
203MS C.elegans metabolites worm pellets Collection University of Florida
476MS Canis lupus familiaris rectum Treatment UCDavis
478MS Canis lupus familiaris intestine Chromatography UCDavis
233NMR Camellia sinensis metabolites green tea capsule Sample prep/NMR RTI International
471MS Bos taurus Plasma Treatment UCDavis
472MS Bos taurus Plasma sample prep UCDavis
454MS Bacteria cells Treatment UCDavis
456MS Arabidopsis thaliana plant cells Treatment UCDavis
457MS Arabidopsis thaliana plant cells Sample Prep UCDavis
467MS Arabidopsis thaliana plant cells Chromatography UCDavis
18MS Amino acids and other small molecules Rat plasma Analysis/LC-MS University of Michigan
19MS Amino acids and other small molecules Rat plasma Sample prep/LC-MS University of Michigan
20MS Amino acids and other small molecules Rat plasma Analysis/LC-MS University of Michigan
35MS Amino acids and other small molecules Insect larvae Sample prep/MS RTI International
36NMR Amino acids and other small molecules Mouse cecal contents Sample prep/NMR RTI International
37NMR Amino acids and other small molecules Mouse liver Sample prep/NMR RTI International
38NMR Amino acids and other small molecules Mouse urine Sample prep/NMR RTI International
39NMR Amino acids and other small molecules Mouse cecal contents Sample prep/NMR RTI International
40NMR Amino acids and other small molecules Mouse liver Sample prep/NMR RTI International
41NMR Amino acids and other small molecules Mouse serum Sample prep/NMR RTI International
42NMR Amino acids and other small molecules Mouse cecal contents Sample prep/NMR RTI International
43NMR Amino acids and other small molecules Mouse liver Sample prep/NMR RTI International
44NMR Amino acids and other small molecules Mouse serum Sample prep/NMR RTI International
46NMR Amino acids and other small molecules Mouse serum Sample prep/NMR RTI International
47NMR Amino acids and other small molecules Mouse urine Sample prep/NMR RTI International
48NMR Amino acids and other small molecules Mouse cecal contents Sample prep/NMR RTI International
49NMR Amino acids and other small molecules Mouse liver Sample prep/NMR RTI International
66NMR Amino acids and other small molecules Mouse liver Sample prep/NMR RTI International
437MS a a a Michigan
438MS a a a Michigan
439MS a a a Michigan
440MS a a a Michigan
441MS a a a Michigan
443MS a a a Michigan
434MS Florida
449MS Florida
453MS
497MS Collection University of Kentucky
498MS Sample prepration University of Kentucky

Number of records: 240

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