Summary of Study ST000164
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000142. The data can be accessed directly via it's Project DOI: 10.21228/M8MG6K This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
Study ID | ST000164 |
Study Title | Metabolomic analysis of normal and diabetic mouse bone marrow under PBS or metformin treatment |
Study Type | Untargeted Metabolomics |
Study Summary | Wild type and diabetic (MKR) mice were treated daily with intraperitoneal injections of 50 microliters of PBS (control) or metformin (200 mg/kg body weight) for 14 days. Their bone marrow cells were collected and compared by untargeted metabolomics. |
Institute | New York University |
Department | College of Dentistry, Basic Science and Craniofacial Biology |
Laboratory | Xin Li Laboratory |
Last Name | Xin |
First Name | Li |
Address | 345 East 24th Street, Room 901D, New York, NY 10010 |
xl15@nyu.edu | |
Phone | 1-(212)992-7009 |
Submit Date | 2015-03-04 |
Num Groups | 4 |
Total Subjects | 15 samples |
Study Comments | each sample with 3 technical replicates in each mode |
Raw Data Available | Yes |
Raw Data File Type(s) | raw(Thermo) |
Uploaded File Size | 7.1 G |
Analysis Type Detail | LC-MS |
Release Date | 2016-12-22 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Combined analysis:
Analysis ID | AN000256 | AN000257 |
---|---|---|
Analysis type | MS | MS |
Chromatography type | Reversed phase | Reversed phase |
Chromatography system | Thermo Exactive | Thermo Exactive |
Column | Shodex ODP2 HP-4B 5um polymer (50 x 4.6mm) | Shodex ODP2 HP-4B 5um polymer (50 x 4.6mm) |
MS Type | ESI | ESI |
MS instrument type | Orbitrap | Orbitrap |
MS instrument name | Thermo Q Exactive Orbitrap | Thermo Q Exactive Orbitrap |
Ion Mode | POSITIVE | NEGATIVE |
Units | Peak area | Peak area |
MS:
MS ID: | MS000206 |
Analysis ID: | AN000256 |
Instrument Name: | Thermo Q Exactive Orbitrap |
Instrument Type: | Orbitrap |
MS Type: | ESI |
Ion Mode: | POSITIVE |
Capillary Temperature: | 30V |
Collision Gas: | 40 units |
Ion Source Temperature: | 3.5 kv |
Ion Spray Voltage: | Electrospray Ionization |
Ionization Potential: | < 2ppm |
Atom Gun Current: | 3000000 |
Sample Dripping: | 75-1200 |
Scanning Range: | 20 v |
Skimmer Voltage: | 120 v |
MS ID: | MS000207 |
Analysis ID: | AN000257 |
Instrument Name: | Thermo Q Exactive Orbitrap |
Instrument Type: | Orbitrap |
MS Type: | ESI |
Ion Mode: | NEGATIVE |
Capillary Temperature: | 30V |
Collision Gas: | 40 units |
Ion Source Temperature: | 3.1 kv |
Ion Spray Voltage: | Electrospray Ionization |
Ionization Potential: | < 4 ppm |
Atom Gun Current: | 3000000 |
Sample Dripping: | 75-1200 |
Scanning Range: | 20 v |
Skimmer Voltage: | 120 v |