Summary of Study ST001268

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000853. The data can be accessed directly via it's Project DOI: 10.21228/M8F108 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST001268
Study TitleMetabolome data to annotate metabolite origins
Study SummaryPlasma metabolomics from HIV subjects and controls was incorporated with microbiome data to develop Annotation of Metabolite Origins via Networks (AMON).
Institute
University of Colorado Denver
DepartmentAnschutz Medical Campus
Last NameReisdorph
First NameNichole
Address12850 East Montview Blvd, Aurora, CO, 80045, USA
Emailnichole.reisdorph@ucdenver.edu
Phone3037249234
Submit Date2019-10-22
Total Subjects63
Raw Data AvailableYes
Raw Data File Type(s)d
Analysis Type DetailLC-MS
Release Date2019-10-11
Release Version1
Nichole Reisdorph Nichole Reisdorph
https://dx.doi.org/10.21228/M8F108
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

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Combined analysis:

Analysis ID AN002105 AN002106 AN002107 AN002108
Analysis type MS MS MS MS
Chromatography type Reversed phase Reversed phase HILIC HILIC
Chromatography system Agilent 1290 Agilent 1290 Agilent 1290 Agilent 1290
Column Agilent Zorbax RRHD SB-C18 (100 x 2.1mm,1.8um) Agilent Zorbax RRHD SB-C18 (100 x 2.1mm,1.8um) Phenomenex Kinetex HILIC 100A (50 x 2.1 mm,2.6um) Phenomenex Kinetex HILIC 100A (50 x 2.1 mm,2.6um)
MS Type ESI ESI ESI ESI
MS instrument type QTOF QTOF QTOF QTOF
MS instrument name Agilent 6520 QTOF Agilent 6520 QTOF Agilent 6550 QTOF Agilent 6550 QTOF
Ion Mode POSITIVE NEGATIVE POSITIVE NEGATIVE
Units Abundance Abundance Abundance Abundance

MS:

MS ID:MS001956
Analysis ID:AN002105
Instrument Name:Agilent 6520 QTOF
Instrument Type:QTOF
MS Type:ESI
MS Comments:Scan range 50-1700 m/z, scan rate 2.2 spectra/sec, gas temp 300C, gas flow 12 L/min, nebulizer 30 psig, Vcap 4000 V, fragmentor 120 V. Data processed with Profinder B.08 using small molecule chromatographic extraction.
Ion Mode:POSITIVE
  
MS ID:MS001957
Analysis ID:AN002106
Instrument Name:Agilent 6520 QTOF
Instrument Type:QTOF
MS Type:ESI
MS Comments:Scan range 50-1700 m/z, scan rate 1.0 spectra/sec, gas temp 300C, gas flow 12 L/min, nebulizer 30 psig, Vcap 4000 V, fragmentor 120 V. Data processed with Profinder B.08 using small molecule chromatographic extraction.
Ion Mode:NEGATIVE
  
MS ID:MS001958
Analysis ID:AN002107
Instrument Name:Agilent 6550 QTOF
Instrument Type:QTOF
MS Type:ESI
MS Comments:Scan range 75-1700 m/z, scan rate 2.0 spectra/sec, gas temp 225C, gas flow 18 L/min, nebulizer 45 psig, Vcap 3500 V, fragmentor 360 V. Data processed with Profinder B.08 using small molecule chromatographic extraction.
Ion Mode:POSITIVE
  
MS ID:MS001959
Analysis ID:AN002108
Instrument Name:Agilent 6550 QTOF
Instrument Type:QTOF
MS Type:ESI
MS Comments:Scan range 75-1700 m/z, scan rate 2.0 spectra/sec, gas temp 225C, gas flow 18 L/min, nebulizer 45 psig, Vcap 3500 V, fragmentor 360 V. Data processed with Profinder B.08 using small molecule chromatographic extraction.
Ion Mode:NEGATIVE
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