Summary of Study ST001651
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001057. The data can be accessed directly via it's Project DOI: 10.21228/M82Q48 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST001651 |
| Study Title | Analysis of metabolites in gut microbioal culture media and microbial cells |
| Study Summary | We developed an untargeted stable isotope-resolved metabolomics (SIRM) approach for the holistic study of gut microbial metabolites |
| Institute | University of Kentucky |
| Last Name | Deng |
| First Name | Pan |
| Address | 789 South Limestone |
| pde233@uky.edu | |
| Phone | 8595623039 |
| Submit Date | 2020-12-11 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | raw(Thermo) |
| Analysis Type Detail | LC-MS |
| Release Date | 2021-03-01 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Combined analysis:
| Analysis ID | AN002697 | AN002698 |
|---|---|---|
| Analysis type | MS | MS |
| Chromatography type | HILIC | HILIC |
| Chromatography system | Thermo Dionex Ultimate 3000 | Thermo Dionex Ultimate 3000 |
| Column | SeQuant ZIC-HILIC (150 x 2.1mm,5um) | SeQuant ZIC-HILIC (150 x 2.1mm,5um) |
| MS Type | ESI | ESI |
| MS instrument type | Orbitrap | Orbitrap |
| MS instrument name | Thermo Q Exactive Orbitrap | Thermo Q Exactive Orbitrap |
| Ion Mode | POSITIVE | NEGATIVE |
| Units | peak area | peak area |
MS:
| MS ID: | MS002495 |
| Analysis ID: | AN002697 |
| Instrument Name: | Thermo Q Exactive Orbitrap |
| Instrument Type: | Orbitrap |
| MS Type: | ESI |
| MS Comments: | The mass spectrometer was operated in positive and negative ionization modes. Initial metabolite identification was performed using Compound Discoverer 3.1 (Thermo Fisher Scientific).Metabolites were further confirmed by comparison of the ion features in the samples with an in-house reference library of authentic chemical standards. Peak areas of metabolites and isotopologues were integrated and exported to Excel via the TraceFinder 5.0 software package (Thermo Fisher Scientific). |
| Ion Mode: | POSITIVE |
| MS ID: | MS002496 |
| Analysis ID: | AN002698 |
| Instrument Name: | Thermo Q Exactive Orbitrap |
| Instrument Type: | Orbitrap |
| MS Type: | ESI |
| MS Comments: | The mass spectrometer was operated in positive and negative ionization modes. Initial metabolite identification was performed using Compound Discoverer 3.1 (Thermo Fisher Scientific).Metabolites were further confirmed by comparison of the ion features in the samples with an in-house reference library of authentic chemical standards. Peak areas of metabolites and isotopologues were integrated and exported to Excel via the TraceFinder 5.0 software package (Thermo Fisher Scientific). |
| Ion Mode: | NEGATIVE |
