Summary of Study ST000296

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench,, where it has been assigned Project ID PR000237. The data can be accessed directly via it's Project DOI: 10.21228/M81608 This work is supported by NIH grant, U2C- DK119886.


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Study IDST000296
Study TitleChronic mild stress and Lactobacillus experiments on mice
Study SummaryMice were devided into three groups (Naive untreated, Stressed untreated, Stressed + Lacto). The stressed groups were subjected to unpredictable chronic mild stress for seven weeks. Three weeks into the protocol, the +Lacto groups were administered probiotic Lactobacillus daily.
University of Michigan
DepartmentBiomedical Research Core Facilities
LaboratoryMetabolomics core
Last NameKachman
First NameMaureen
Address6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714
Phone(734) 232-8175
Submit Date2014-10-28
Num Groups4
Total Subjects16
Raw Data AvailableYes
Raw Data File Type(s)d
Analysis Type DetailGC-MS
Release Date2016-06-18
Release Version1
Maureen Kachman Maureen Kachman application/zip

Select appropriate tab below to view additional metadata details:


Project ID:PR000237
Project DOI:doi: 10.21228/M81608
Project Title:Brain-Immune-Gut Interaction Studies
Project Summary:Brain-Immune-Gut Interaction in Chronic Mild Stress
Institute:University of Virginia
Laboratory:Kipnis Lab
Last Name:Kipnis
First Name:Jonathan
Address:Charlottesville, VA


Subject ID:SU000316
Subject Type:Animal
Subject Species:Mus musculus
Taxonomy ID:10090
Species Group:Mammal


Subject type: Animal; Subject species: Mus musculus (Factor headings shown in green)

mb_sample_id local_sample_id Lactobacillus Stress
SA013465S00016742N N
SA013466S00016738N N
SA013467S00016741N N
SA013468S00016740N N
SA013469S00016739N N
SA013470S00016747N Y
SA013471S00016746N Y
SA013472S00016745N Y
SA013473S00016743N Y
SA013474S00016744N Y
SA013475S00017167POOLED POOLED
SA013476S00016752Y Y
SA013477S00016750Y Y
SA013478S00016748Y Y
SA013479S00016749Y Y
SA013480S00016751Y Y
Showing results 1 to 16 of 16


Collection ID:CO000310
Collection Summary:-
Sample Type:Serum


Treatment ID:TR000330
Treatment Summary:-

Sample Preparation:

Sampleprep ID:SP000324
Sampleprep Summary:-
Sampleprep Protocol Filename:ShortChainFattyAcids-20150305.docx

Combined analysis:

Analysis ID AN000474
Analysis type MS
Chromatography type GC
Chromatography system Agilent 7890A
Column Phenomenex Zebron ZB-WAXplus (30m x 0.25mm, 0.25um)
MS Type EI
MS instrument type Single quadrupole
MS instrument name Agilent 5975C
Units uM


Chromatography ID:CH000337
Methods Filename:WAXPLUS_100-200C_2_SIM.txt
Instrument Name:Agilent 7890A
Column Name:Phenomenex Zebron ZB-WAXplus (30m x 0.25mm, 0.25um)
Chromatography Type:GC


MS ID:MS000414
Analysis ID:AN000474
Instrument Name:Agilent 5975C
Instrument Type:Single quadrupole
MS Type:EI
MS Comments:GCMS method
Analysis Protocol File:ShortChainFattyAcids-20150305.docx