Metabolomics Structure Database

 
MW REGNO: 2824
Common Name:8-iso-PGA1
Systematic Name:9-oxo-15S-hydroxy-10Z,13E-prostadienoic acid-cyclo[8S,12S]
RefMet Name:8-iso-PGA1
Synonyms: [PubChem Synonyms]
Exact Mass:
336.2301 (neutral)    Calculate m/z:
Formula:C20H32O4
InChIKey:BGKHCLZFGPIKKU-DRSVPBQLSA-N
LIPID MAPS Category:Fatty Acyls [FA]
LIPID MAPS mainclass:Eicosanoids [FA03]
LIPID MAPS subclass:Isoprostanes [FA0311]
SMILES:CCCCC[C@@H](/C=C/[C@H]1C=CC(=O)[C@H]1CCCCCCC(=O)O)O
Studies:Available studies (via RefMet name)

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External database links:

PubChem CID:6473771
LIPID MAPS ID:LMFA03110008
CHEBI ID:190149
HMDB ID:HMDB0002236
Chemspider ID:4975993
Plant Metabolite Hub(Pmhub):MS000000969

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y
NPClassifier classification: "NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products", Kim HW, Wang M, Leber CA, Nothias LF, Reher R, Kang KB, van der Hooft JJJ, Dorrestein PC, Gerwick WH and Cottrell GW. J Nat Prod. 2021 Nov 26;84(11):2795-2807.DOI: 10.1021/acs.jnatprod.1c00399.

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