Species
Human
Mouse
Rat
Escherichia coli
Plasmodium falciparum
Arabidopsis thaliana
Saccharomyces cerevisiae
C. elegans
Bacteria
Cow
M. tuberculosis
Pig
Sheep
Zebrafish
Fruit fly
Dog
Rhesus monkey
Frog
Maize
Honey bee
Soybean
Synechococcus
Staphylococcus aureus
Bacteroides thetaiotaomicron
Chicken
Eggerthella lenta
Golden hamster
Chacrona
Enterococcus faecium
Fungi
Goat
Rice
Synechococcus elongatus
Synthetic
Thalassiosira pseudonana
Barley
Chlamydomonas reinhardtii
Enterococcus faecalis
Holly oak
Horse
Phytoplankton
Pseudomonas aeruginosa
Salmonella enterica
Wuchang bream
Algae
Bacillus subtilis
Candida albicans
Catshark
Date palm
Dungeness crab
Marine microbes
Rabbit
Rainbow trout
Staphylococcus epidermidis
Thermococcus kodakarensis
Tomato
Toxoplasma gondii
Trypanosoma brucei
Acropora cervicornis
Alexandrium minutum
Alexandrium tamarense
Apple
Baboon
Bacteroides fragilis
Bacteroides uniformis
Blautia producta
Cat
Clostridium clostridioforme
Clostridium hathewayi
Clostridium hylemonae
Clostridium scindens
Clostridium symbiosum
Enterococcus hirae
Escherichia fergusonii
Flavonifractor plautii
Fusobacterium nucleatum
Hooded seal
Insect
Little brown bat
Macaque monkey
Parabacteroides distasonis
Parasite
Rapeseed
Abiotic
Acinetobacter baumannii
Alexandrium catenella
Athorix
Aurantiochytrium limacinum
Auxenochlorella
Bacillus megaterium
Basil
Bumble Bee
Cabbage
Chinook salmon
Coho salmon
Flame Bromeliad
Garlic
Heart-leaved poison
Ilyonectria estremocensis
Ilyonectria mors-panacis
Ilyonectria robusta
Ilyonectria rufa
Ilyonectria torresensis
Lettuce
Marmoset
Mayfly
Methanococcus maripaludis
Microbacterium sediminis
Microchloropsis gaditana
Mozambique tilapia
Neonectria obtusispora
Nitzschia lecointei
Oat
Oil palm
Onion
Pine
Plants
Rothia
Seal
Sinorhizobium
Strawberry
Streptococcus mutans
Streptococcus pyogenes
Sulfolobus acidocaldarius
Sulfolobus islandicus
Tea plant
Thermococcus sp. AM4
Veillonella parvula
Vibrio cholerae
Vine
Western clawed frog
Wheat
-
Acidithiobacillus
Acinetobacter
Actinobacteria
Alexandrium pacificum
Alkanet
Alpinaria cf. rhododendri
Alternaria alternata
Alternaria arborescens
Alternaria cf. alternata
Alternaria infectoria
Amphipods
Ant
Anthostomella sp.
Aposphaeria corallinolutea
apple, pear
Arctic lamprey
Articulospora atra
Aspergillus amstelodami
Aspergillus niger
Aureobasidium cf. subglaciale
Bacillus cereus
Bacillus pumilus
Bacteroides
Bacteroides ovatus
Banana
Barbatosphaeriaceae sp.
Beet
Bermudagrass
Bifidobacterium
Bighorn sheep
Biofilm Microbial Community
Black flying fox fruit bat
Black mustard
Blood parasite
Botrytis cinerea
Brine shrimp
Camaropella sp.
Camelina
Candida auris
Capybara
Carrot
Casaresia cf. sphagnorum
Cassiopea andromeda
Cattle
C. difficile
Centella asiatica
Chaetopsis sp.
Chickpea
Chili pepper
Chinese brake fern
Chinese hamster
Chlorella
Cladosporium allicinum
Cladosporium cf. cladosporioides
Clam
Colletotrichum cf. truncatum
Colletotrichum fioriniae
Common bean
Common gromwell
Common prawn
Coniochaeta cf. marina
Coniothyrium ferrarisianum
Cordyceps
Cormus domestica
Corydalis yanhusuo
Corylus americana
Corylus avellana
Crayfish
Creosphaeria sassafras
Cryptococcus neoformans
Cryptosporella sp.
Cytospora cf. cedri
Cytospora ribis
Diaporthe phaseolorum
Diaporthe vaccinii
Didymella pomorum
Didymella sp.
Discosia rubi
Dolphin
Dothideaceae sp.
Echium vulgare
Enterobacter sp.
Epicoccum nigrum
Epicoleosporium ramularioides
Equisetum arvense
Equisetum hyemale
Equisetum telmateia
European pepper moth
Exaiptasia diaphana
Exidia glandulosa
Faecalibacterium prausnitzii
Flesh Fly
Florida manatee
Food item
Fragilariopsis cylindrus
Fusarium tricinctum
Gardenerella vaginalis
Geastrumia polystigmatis
Ginger
Ginkgo biloba
Ginseng
Gloeophyllum sepiarium
Glycyrrhiza glabra
Godronia cassandrae
Godronia cf. cassandrae
Grass
Guinea Grass
Habanero pepper
Haemophilus influenzae
Hyaloscyphaceae sp.
Hypoderma cf. rubi
Hypoxylon submonticulosum
Karenia brevis
Kretzschmaria hedjaroudei
Lachnellula calyciformis
Lachnum sp.
Lacticaseibacillus rhamnosus and Faecalibacterium prausnitzii
Lactobacillus
Lactobacillus crispatus
Lactobacillus iners
Lake water
Lentilactobacillus kefiri
Leptodontidium sp.
Long pepper
Lophiotrema mucilaginosis
Loquat
Malassezia globosa
Malaysian red seaweed
Marine plankton
Maritime pine
Maryland blue crab
Microdochium neoqueenslandicum
Millet
Mollisia cf. melaleuca
Mollisia cf. nigrescens
Mollisia sp.
Mosquito
Moss
Mucidula mucida
Mus musculus
Mycoplasma mycoides, Minimal cell JCVI-syn3B
Nannochloropsis
Navicula cf. perminuta
Navicula pelliculosa
Nemania diffusa
Nemania serpens
Nemania sp.
Neocucurbitaria sp.
Neodevriesiaceae sp.
Neovaginatispora sp.
Nigrospora sp.
Nigrospora sphaerica
Olive
Ophiocordyceps
Orange
Orange-spotted grouper
Other
Other abiotic sample
Pacific Abalone
Panax ginseng
Paramycosphaerella sp.
Paraphaeosphaeria neglecta
Peach
Pear
Pendant amaranth
Penicillium camponotum
Phaeoacremonium fraxinopennsylvanicum
Phaeodactylum tricornutum
Phaeomoniellales sp.
Phialocephala sp.
Phyllosticta cf. pyrolae
Phyllosticta pyrolae
Phyllostictina vaccinii
Picochlorum celeri
Pilidium concavum
Plagiostoma petiolophilum
Plankton
Plasmodium berghei
Pleosporales sp.
Poplar
Populus trichocarpa
Porphyromonas gingivalis
Potato
Proliferodiscus sp.
Propionibacterium
Pseudoplectania nigrella
Purslane
Pyrenopeziza sp.
Ramularia sp.
Red-striped killifish
Rhytismataceae sp.
Rickettsia parkeri
Roundworm
Rubber tree
Rubrivivax benzoatilyticus
Ruegeria pomeroyi
Rumex patientia
Sage
Salmonella typhimurium
Sarea difformis
Seawater
Seimatosporium lichenicola
S. epidermidis
Setomelanomma holmii
Sphaerulina vaccinii
Spinach
Squirrel
Stemphylium globuliferum
Streptococcus
Stylophora pistillata
Sugarcane
Sugar Maple
Swine colonic microbiota
Symbiodiniaceae
Thyronectria cucurbitula
Tobacco
Treponema
Trichaptum abietinum
Turquoise killifish
Tympanidaceae sp.
Unknown
Venturia sp.
Water flea
White-footed mouse
Woody vine
Xylariaceae sp.
Xylaria corniformis
Xylaria ellisii
Xylaria sp.
Yew