Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST000154)

(Analysis AN000245)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7	F8	F9
Aspartate_13C_1	ME696318	0.65	3.53	0.07	0.33	3.51	0.06	0.22	1.18	0.03
Adenosine diphosphate_13C_3	ME696308	3.27	0.06	0.06	1.13	0.03	0.04	4.26	0.04	0.11
Adenosine monophosphate_13C_3	ME696314	3.49	0.01	0.02	0.86	0.03	0.03	4.19	0.01	0.03
Adenosine diphosphate_13C_1	ME696306	2.87	0.33	0.05	0.99	0.54	0.05	3.51	0.58	0.08
Adenosine monophosphate_13C_1	ME696312	3.40	0.26	0.02	0.64	0.38	0.04	3.77	0.45	0.04
Adenosine triphosphate_13C_3	ME696325	2.93	0.11	0.21	1.17	0.24	0.14	3.38	0.10	0.41
Nicotinamide Adenine Dinucleotide oxidized_13C_4	ME696382	3.64	0.02	0.06	1.29	0.01	0.01	3.48	0.01	0.16
3-Glycerophosphate_13C_2	ME696359	2.92	0.01	0.02	0.54	0.05	0.04	5.07	0.01	0.01
Glucose 6-phosphate or fructose-6-phosphate_13C_2	ME696352	2.06	0.06	0.09	0.87	0.06	0.07	3.85	0.03	0.04
3-Glycerophosphate_13C_1	ME696358	2.71	0.02	0.02	0.49	0.03	0.00	4.32	0.05	0.06
Nicotinamide Adenine Dinucleotide reduced_13C_4	ME696387	2.36	0.01	0.10	0.76	0.01	0.02	4.54	0.00	0.20
Nicotinamide Adenine Dinucleotide reduced_13C_5	ME696388	1.97	0.01	0.03	0.58	NA	0.00	4.37	0.00	0.05
Fructose 1,6-bisphosphate_13C_2	ME696341	1.13	0.93	1.09	1.71	0.18	0.13	1.98	0.75	0.83
Sucrose	ME696290	1.28	1.12	1.03	2.54	0.07	0.04	1.45	0.61	0.86
Adenosine diphosphate_13C_2	ME696307	2.36	0.13	0.72	0.63	0.25	1.01	2.15	0.17	1.57
Glutamate	ME696361	1.64	0.73	1.63	0.58	0.13	0.09	1.58	0.80	1.73
Aspartate_13C_3	ME696320	3.22	2.03	0.13	1.30	0.15	0.14	1.28	0.23	0.32
Aspartate_13C_2	ME696319	3.67	0.43	0.05	2.02	0.10	0.07	1.28	0.13	0.00
Adenosine diphosphate	ME696305	3.35	0.44	0.25	1.22	0.31	0.35	1.76	0.71	0.61
Adenosine monophosphate	ME696311	3.88	0.39	0.23	0.96	0.37	0.33	1.94	0.58	0.32
Citrate or Isocitrate_13C_2	ME696330	1.72	NA	NA	3.11	0.02	0.02	1.53	NA	NA
Citrate or Isocitrate_13C_1	ME696329	1.91	0.04	0.09	1.85	0.32	NA	2.15	0.05	0.05
Sucrose_13C_1	ME696406	1.86	0.04	0.06	2.25	0.14	0.24	2.21	0.00	0.02
Malate_13C_2	ME696372	2.53	0.01	0.05	2.92	0.13	0.07	2.62	0.01	0.01
Citrate or Isocitrate_13C_3	ME696331	2.57	0.08	0.08	2.15	0.36	0.32	2.80	0.12	0.29
Malate_13C_1	ME696371	2.42	0.00	0.13	2.00	0.08	0.22	2.75	0.03	0.04
Adenosine monophosphate_13C_5	ME696316	2.35	0.06	NA	0.41	NA	NA	0.87	NA	0.06
Lactate_13C_1	ME696368	2.22	0.28	0.16	1.23	NA	NA	1.09	0.33	0.87
Citrate or Isocitrate_13C_6	ME696334	1.15	0.97	NA	1.20	NA	NA	0.78	NA	0.65
Citrate or Isocitrate_13C_4	ME696332	1.58	0.17	NA	0.99	NA	NA	1.53	0.35	0.00
Malate_13C_4	ME696374	1.10	NA	0.04	1.27	NA	NA	1.25	NA	0.11
Malate_13C_3	ME696373	2.15	0.01	NA	0.85	0.02	0.02	2.29	NA	NA
Nicotinamide Adenine Dinucleotide oxidized_13C_5	ME696383	2.20	NA	0.03	0.70	NA	NA	2.38	0.01	0.01
Glutamate_13C_2	ME696363	2.42	0.03	0.02	0.87	0.04	0.01	2.96	0.03	NA
Glutamate_13C_3	ME696364	2.02	NA	0.00	0.69	NA	0.01	2.85	NA	0.00
Glutamate_13C_4	ME696365	1.62	0.00	0.00	0.55	0.00	NA	2.15	0.00	NA
Adenosine diphosphate_13C_4	ME696309	1.93	NA	0.01	0.43	NA	NA	1.63	NA	0.01
Adenosine triphosphate_13C_4	ME696326	2.43	0.04	0.09	0.59	NA	0.03	1.85	NA	0.10
Adenosine monophosphate_13C_2	ME696313	3.29	0.12	0.54	0.51	0.17	0.67	2.68	0.15	0.87
Adenosine monophosphate_13C_4	ME696315	3.41	0.00	0.00	0.39	0.00	0.01	2.51	NA	0.01
Fructose 1,6-bisphosphate_13C_1	ME696340	0.27	0.24	NA	0.33	2.90	1.30	0.43	0.23	1.44
Glucose 6-phosphate or fructose-6-phosphate_13C_1	ME696351	0.49	0.34	0.99	0.63	1.65	1.82	1.93	0.16	0.68
3-Glycerophosphate	ME696357	0.68	0.76	0.52	0.08	0.02	0.00	1.24	2.39	3.31
Sedoheptulose 7-phosphate	ME696398	0.34	0.46	0.37	0.09	0.11	0.13	1.32	2.38	3.81
Ribose-5-phosphate or xylulose 5-phosphate	ME696392	0.05	0.76	0.43	0.05	0.29	0.20	0.06	3.06	3.15
2 or 3-phosphoglycerate_2PG/3PG	ME696291	0.22	1.52	1.28	0.24	0.26	0.15	0.20	1.80	3.04
Fructose 1,6-bisphosphate	ME696285	0.15	0.68	0.63	0.18	0.48	0.37	0.11	2.35	4.07
Glucose 6-phosphate or fructose-6-phosphate	ME696350	0.40	1.07	0.85	0.19	0.13	0.14	0.26	2.03	3.64
Malonyl-CoA_13C_3	ME696378	0.77	3.60	0.35	0.17	NA	0.11	0.43	2.09	NA
Nicotinamide Adenine Dinucleotide oxidized	ME696287	0.39	1.80	0.71	0.32	1.25	0.94	0.25	2.65	0.69
Nicotinamide Adenine Dinucleotide reduced	ME696288	0.21	1.74	0.76	0.12	1.23	0.82	0.27	2.95	0.90
Nicotinamide Adenine Dinucleotide oxidized_13C_1	ME696379	0.78	1.47	0.71	0.51	1.15	0.19	0.61	2.38	1.20
Nicotinamide Adenine Dinucleotide reduced_13C_1	ME696384	0.41	1.38	0.70	0.22	1.07	0.21	0.62	2.60	1.53
Glutamate_13C_1	ME696362	0.20	1.93	0.00	0.06	1.94	NA	0.30	1.90	NA
Adenosine triphosphate_13C_1	ME696323	1.48	1.19	0.19	0.58	1.71	0.18	1.68	1.72	0.27
Acetyl-CoA_13C_1	ME696303	0.92	1.69	0.10	0.63	1.49	0.10	1.03	1.93	0.21
Malonyl-CoA_13C_1	ME696376	1.02	1.88	0.12	0.34	1.02	NA	0.94	1.80	0.03
3-phosphoglyceraldehyde	ME696346	NA	0.81	0.49	0.39	NA	NA	NA	1.24	1.43
3-phosphoglyceraldehyde_13C_3	ME696349	0.47	0.34	NA	0.33	NA	NA	NA	1.52	2.33
Lactate	ME696367	0.66	1.23	1.05	0.55	NA	NA	0.50	1.53	1.20
Malate	ME696286	0.80	1.84	1.35	0.87	0.10	0.03	0.73	1.04	1.31
6-Phosphogluconate	ME696295	0.84	2.01	1.76	0.38	0.40	0.67	0.57	0.80	1.57
Phosphoenolpyruvate	ME696289	0.25	1.36	1.40	0.41	0.24	0.36	NA	1.24	1.61
Citrate or Isocitrate	ME696328	0.41	2.20	1.79	0.39	0.13	0.13	0.38	1.47	2.10
Erythrose 4-phosphate	ME696335	0.32	1.81	1.37	0.27	0.37	0.75	0.39	1.79	1.93
Malonyl-CoA	ME696375	0.78	1.75	1.09	0.25	0.36	0.44	1.57	1.60	1.16
Acetyl-CoA	ME696302	0.83	1.68	1.09	0.63	0.70	0.78	0.43	1.76	1.10
Adenosine triphosphate	ME696322	1.48	1.13	0.74	0.58	0.89	0.55	0.71	1.51	1.44
Aspartate	ME696317	1.49	1.56	3.38	0.74	0.09	0.09	0.56	0.59	0.98
Malonyl-CoA_13C_2	ME696377	0.45	0.10	1.94	3.18	0.07	0.71	0.13	0.18	2.71
Nicotinamide Adenine Dinucleotide oxidized_13C_3	ME696381	1.54	0.04	1.54	0.45	0.06	0.07	1.58	0.06	3.67
Nicotinamide Adenine Dinucleotide reduced_13C_3	ME696386	0.79	0.05	1.49	0.30	0.05	0.06	1.57	0.06	4.63
Acetyl-CoA_13C_2	ME696304	0.70	0.32	2.01	0.21	0.46	1.72	0.53	0.30	2.75
Adenosine triphosphate_13C_2	ME696324	0.74	0.31	1.73	0.23	0.44	1.64	0.58	0.34	3.00
Nicotinamide Adenine Dinucleotide oxidized_13C_2	ME696380	1.12	0.53	1.43	0.59	0.41	1.61	1.03	0.74	1.53
Nicotinamide Adenine Dinucleotide reduced_13C_2	ME696385	0.63	0.51	1.50	0.26	0.44	1.59	1.14	0.82	2.11

Factors:

F1	Type:Noxa high clone \| Treatment:13C labeled glucose
F2	Type:Noxa high clone \| Treatment:15N alpha nitrogen labeled glutamine
F3	Type:Noxa high clone \| Treatment:15N amide nitrogen labeled glutamine
F4	Type:Noxa high plasmid \| Treatment:13C labeled glucose
F5	Type:Noxa high plasmid \| Treatment:15N alpha nitrogen labeled glutamine
F6	Type:Noxa high plasmid \| Treatment:15N amide nitrogen labeled glutamine
F7	Type:Noxa low clone \| Treatment:13C labeled glucose
F8	Type:Noxa low clone \| Treatment:15N alpha nitrogen labeled glutamine
F9	Type:Noxa low clone \| Treatment:15N amide nitrogen labeled glutamine

Data matrix