Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST003080)

(Analysis AN005038)

Metabolite	Structure	F1	F2	F3	F4	F5	F6
methylthioadenosine	ME800617	2.62	NA	0.53	NA	NA	0.08
isoleucine	ME800697	NA	2.03	2.28	2.47	0.71	0.45
Alpha-Ketoglutarate	ME800695	1.00	NA	0.54	0.95	1.09	1.02
choline	ME800803	1.55	0.00	0.79	1.11	0.90	1.02
GSH	ME800730	0.56	NA	NA	0.61	0.58	1.21
N-acetylmethionine	ME800758	NA	NA	0.90	0.97	1.11	0.95
"ALPHA-KETOGLUTARIC ACID_1,2,3,4- 13C4"	ME800800	NA	NA	NA	0.98	1.11	0.94
FUMARIC ACID_13C4	ME800847	NA	NA	NA	1.22	1.04	0.84
Pyridoxal	ME800764	NA	NA	NA	1.13	1.21	0.79
formyl_methionine	ME800677	0.18	NA	0.55	1.34	1.49	0.86
alpha-keto-isovalerate	ME800718	0.27	NA	0.03	1.36	1.57	0.76
Ureidosuccinic_acid	ME800810	0.14	NA	0.10	1.34	1.39	0.86
Kynurenic Acid	ME800648	0.57	0.82	0.92	1.77	1.33	0.86
S-Adenosyl-L-Homocysteine	ME800709	0.64	0.88	1.11	1.61	1.34	0.82
p-aminobenzoate	ME800750	0.33	0.76	0.74	1.50	1.61	0.84
dCytidine	ME800751	0.57	0.64	0.97	1.79	1.66	0.76
tryptophan	ME800723	0.59	0.60	1.04	1.72	1.65	0.76
phosphoenolpyruvate	ME800637	0.46	0.56	0.80	1.79	1.70	0.81
cis-aconitate	ME800678	0.64	0.75	0.68	1.72	1.82	0.77
malate	ME800622	0.62	0.62	0.72	1.74	1.77	0.79
quinolinic_acid	ME800814	0.56	0.63	0.79	1.78	1.81	0.77
3-phosphoglycerate	ME800832	0.61	0.91	1.05	1.74	1.89	0.61
glycine	ME800689	0.86	0.92	0.82	1.47	1.68	0.75
sorbitol	ME800769	0.79	1.01	0.72	1.33	1.69	0.74
succinate	ME800733	0.95	0.80	0.91	1.47	1.50	0.75
citrulline	ME800790	0.74	0.80	0.99	1.47	1.74	0.74
O-phosphoethanolamine	ME800782	0.72	0.78	1.05	1.57	1.72	0.72
myo-inositol	ME800644	0.83	0.79	0.93	1.55	1.67	0.73
N-acetylphenylalanine	ME800663	0.74	0.90	0.96	1.57	1.66	0.74
fumarate	ME800825	0.66	0.77	0.81	1.57	1.67	0.79
N-acetylaspartate	ME800735	0.83	0.68	0.78	1.50	1.69	0.78
aspartate	ME800643	1.16	0.62	1.12	1.09	1.14	0.87
2-hydroxybutyric_acid	ME800833	1.12	0.68	1.36	1.11	1.40	0.74
inosine	ME800655	1.06	0.70	1.39	1.16	1.25	0.78
proline	ME800616	0.91	1.32	1.26	1.14	1.68	0.83
L-PHENYLALANINE_RING-13C6	ME800688	1.17	1.11	1.26	1.48	1.55	0.69
homocitrulline	ME800796	0.87	1.24	1.20	1.25	1.42	0.77
ornithine	ME800661	0.90	1.22	1.33	1.24	1.39	0.74
gamma-glutamyl-alanine	ME800846	0.89	1.24	1.31	1.33	1.40	0.72
phenylalanine	ME800787	0.93	1.22	1.32	1.39	1.34	0.71
L-TYROSINE_RING-13C6	ME800658	1.23	1.12	1.09	1.15	1.22	0.76
creatine	ME800731	1.11	1.29	1.20	1.20	1.20	0.77
3-ureidopropionate	ME800649	1.08	1.03	1.25	1.25	1.24	0.77
threonine	ME800659	1.00	1.11	1.34	1.29	1.26	0.75
N-alpha-acetyllysine	ME800841	1.04	1.13	1.17	1.20	1.32	0.78
betaine	ME800823	0.99	1.12	1.14	1.35	1.24	0.79
carnitine	ME800740	1.07	1.19	1.18	1.31	1.28	0.75
CREATININE_N-METHYL-D3	ME800621	0.95	1.00	1.07	1.42	1.39	0.76
Itaconic Acid	ME800680	1.04	0.92	1.11	1.41	1.45	0.71
phosphocholine	ME800763	0.90	1.11	1.16	1.41	1.32	0.78
alanine	ME800666	0.89	1.12	1.03	1.42	1.43	0.77
lactic_acid	ME800699	1.00	1.18	1.01	1.42	1.44	0.71
L-TRYPTOPHAN_13C11	ME800700	0.88	0.95	0.95	1.32	1.37	0.80
Glycerophosphocholine	ME800785	0.92	0.99	1.08	1.25	1.51	0.77
Pipecolate	ME800624	0.86	1.02	1.06	1.37	1.56	0.75
citrate	ME800682	0.87	1.00	0.97	1.51	1.52	0.75
"THYMINE_1,3-15N2"	ME800755	0.88	1.02	1.03	1.46	1.45	0.75
lysine	ME800672	0.79	0.99	1.10	1.51	1.53	0.74
glutamine	ME800665	0.76	0.96	1.03	1.43	1.51	0.80
valine	ME800797	0.73	1.04	1.03	1.47	1.56	0.77
tyrosine	ME800650	0.76	0.99	1.23	1.44	1.44	0.77
Pantothenate	ME800704	0.88	0.90	1.11	1.38	1.44	0.78
creatinine	ME800741	0.83	0.92	1.12	1.43	1.50	0.76
pseudouridine_unc	ME800811	0.81	0.96	1.11	1.42	1.47	0.78
serine	ME800743	0.83	0.95	1.42	1.32	1.47	0.72
Alpha-Lipoic Acid_unc	ME800623	1.16	0.93	1.22	1.30	1.39	0.69
Glycerol 3-Phosphate	ME800626	0.93	0.86	1.21	1.33	1.61	0.70
guanidinoacetate	ME800628	0.92	0.87	1.23	1.30	1.50	0.74
propionylcarnitine	ME800638	0.92	0.94	1.16	1.30	1.51	0.75
C5 Carnitines	ME800746	0.97	0.94	1.19	1.14	1.52	0.74
arginine	ME800766	0.87	0.99	1.20	1.27	1.40	0.79
acetylcarnitine	ME800738	1.01	0.99	1.17	1.28	1.44	0.74
Butyrylcarnitine	ME800754	1.00	1.00	1.26	1.24	1.45	0.72
taurine	ME800614	0.75	0.75	1.22	1.29	1.72	0.74
orotate	ME800701	0.74	0.90	1.17	1.17	1.43	0.87
phosphocreatine	ME800675	0.67	0.92	1.17	1.31	1.53	0.82
INDOXYL SULFATE	ME800673	1.19	1.84	1.13	1.16	1.30	0.70
uric acid	ME800816	1.62	1.54	1.04	1.11	0.87	0.75
niacinamide	ME800703	1.23	1.24	1.19	1.27	0.99	0.79
thymidine	ME800696	1.43	1.07	1.04	1.37	1.12	0.72
uracil	ME800676	1.54	1.09	1.06	1.50	0.91	0.70
biotin	ME800835	1.47	0.82	1.38	1.00	0.99	0.77
cytidine	ME800840	1.49	0.84	1.38	0.98	0.97	0.77
guanine	ME800705	1.32	0.83	1.58	0.90	0.91	0.82
hypoxanthine	ME800685	1.31	0.85	1.84	0.81	0.84	0.80
F6P_G1P	ME800773	0.90	1.19	1.70	1.29	1.31	0.67
leucine	ME800674	0.93	1.17	1.48	1.43	1.27	0.69
histidine	ME800786	0.78	1.12	1.45	1.13	1.25	0.83
allantoin	ME800775	0.96	1.34	1.53	1.08	1.28	0.74
Methionine sulfoxide	ME800698	0.88	1.31	1.53	1.12	1.26	0.77
asparagine	ME800779	1.04	1.41	1.80	0.98	1.13	0.71
S-Adenosyl-L-methionine	ME800645	1.20	1.46	1.64	0.91	0.98	0.77
GSSG	ME800791	1.31	1.17	1.64	0.99	1.04	0.71
argininosuccinate_unc	ME800679	1.13	1.20	1.44	1.06	1.17	0.76
glutamate	ME800612	1.07	1.17	1.43	1.10	0.91	0.86
cystine	ME800668	1.09	1.74	1.49	1.08	1.11	0.73
palmitate	ME800615	1.44	1.50	1.49	1.07	1.08	0.65
Ribose 1-phosphate_unc	ME800681	0.68	0.22	1.77	1.05	0.60	1.10
HYPOXANTHINE_13C5	ME800726	0.61	0.85	1.59	1.25	1.10	0.89
NICOTINAMIDE_13C6	ME800757	0.52	0.77	1.67	1.25	1.39	0.85
Glucose 6-phosphate	ME800778	0.65	0.98	2.09	1.27	1.28	0.66
Ribose_Ribulose 5-phosphate_3Me-Lys	ME800838	0.88	0.59	1.93	1.18	1.05	0.73
INDOLE-3-ACETATE	ME800827	0.45	0.33	1.36	1.65	1.72	0.74
HYDROXYKYNURENINE	ME800760	0.04	0.84	1.09	1.91	1.67	0.78
kynurenine	ME800794	0.41	0.90	1.12	2.08	1.62	0.67
indolelactate	ME800656	0.15	NA	0.90	1.77	1.74	0.70
3-hydroxybutyric_acid	ME800690	0.54	0.20	0.83	2.05	2.02	0.75
N-acetylglutamate	ME800761	0.57	0.42	0.40	1.66	1.89	0.87
glucose	ME800632	0.25	0.24	0.79	1.51	2.04	0.87
xanthosine	ME800719	0.51	0.36	0.74	1.70	2.15	0.72
Pyridoxine	ME800620	0.02	NA	0.10	1.98	1.71	0.99
methionine	ME800702	0.14	0.13	0.47	1.83	2.56	0.77
3-methyl-2-oxopentanoic_acid	ME800793	0.34	0.38	0.20	1.95	2.18	0.81
glycerate	ME800801	0.17	0.14	0.15	2.32	2.32	0.79
CORTISOL	ME800694	1.48	2.99	1.96	0.92	0.59	0.59
AMP	ME800798	1.56	2.23	2.01	0.55	0.68	0.65
UMP	ME800732	1.53	2.28	2.17	0.64	0.61	0.61
fructose	ME800725	0.84	NA	1.23	NA	NA	1.10
GUANOSINE_15N5	ME800625	1.04	NA	0.32	NA	NA	1.16
adenine	ME800687	2.43	NA	2.04	0.53	0.54	0.74
HIAA	ME800610	1.85	0.23	1.19	0.43	0.43	0.98
leucine-13C6-15N	ME800722	1.23	1.09	1.75	NA	NA	0.54
Isoleucine-13C6-15N	ME800792	0.94	0.79	2.19	NA	NA	0.56
methionine-13C5-15N	ME800826	1.17	0.73	2.10	NA	NA	0.38
UDP-GlcNAc	ME800742	1.04	1.54	1.30	NA	0.48	0.86
proline-13C5-15N	ME800805	1.56	1.32	1.39	NA	NA	0.59
histidine-13C6-15N3	ME800713	1.23	1.23	1.33	NA	NA	0.69
serine-13C3-15N	ME800818	1.34	1.28	1.14	NA	NA	0.66
arginine-13C6-15N4	ME800843	1.45	1.19	1.14	NA	NA	0.66
GSSG-13C4_15N2	ME800756	1.36	1.20	1.22	NA	NA	0.62
tyrosine-13C9-15N	ME800706	1.39	1.21	1.22	NA	NA	0.65
cystine-13C6-15N2	ME800692	1.24	1.21	1.20	NA	NA	0.70
valine-13C5-15N	ME800820	1.25	1.16	1.14	NA	NA	0.73
lysine-13C6-15N2	ME800831	1.32	1.13	1.20	NA	NA	0.67
glycine_13C2-15N	ME800613	1.37	1.11	1.15	NA	NA	0.66
threonine-13C4-15N	ME800691	1.34	1.10	1.15	NA	NA	0.68
phenylalanine-13C9-15N	ME800753	1.31	1.11	1.32	NA	NA	0.67
aspartate-13C6-15N4	ME800781	1.25	1.14	1.24	NA	NA	0.69
"glutamate-13C5,15N"	ME800642	1.28	1.14	1.25	NA	NA	0.67
alanine-13C3-15N	ME800776	2.35	1.70	1.98	0.18	0.19	0.72
L-ALANINE_13C3	ME800729	2.09	1.42	1.66	0.14	0.17	0.68
uridine	ME800662	1.96	0.86	1.32	0.84	0.82	0.71
xanthine	ME800646	2.17	1.21	1.04	0.48	0.79	0.78
cytosine	ME800829	1.93	1.03	1.77	0.58	0.58	0.74
guanosine	ME800660	1.58	1.09	1.95	0.59	0.91	0.69
anserine	ME800736	1.64	1.64	1.93	0.58	0.63	0.70
carnosine	ME800815	1.31	1.38	1.80	0.62	0.72	0.81
cystathionine	ME800717	1.26	1.40	1.54	0.43	0.70	0.99

Factors:

F1	Sample source:CSF \| Developmental Timepoint:E12.5 \| Collection Timepoint:3h \| Maternal Treatment (injection):PolyIC
F2	Sample source:CSF \| Developmental Timepoint:E12.5 \| Collection Timepoint:3h \| Maternal Treatment (injection):POlyIC
F3	Sample source:CSF \| Developmental Timepoint:E12.5 \| Collection Timepoint:3h \| Maternal Treatment (injection):saline
F4	Sample source:Embryonic CSF \| Developmental Timepoint:E10-12.5 \| Collection Timepoint:2.5h \| Maternal Treatment (injection):PolyIC
F5	Sample source:Embryonic CSF \| Developmental Timepoint:E10-12.5 \| Collection Timepoint:2.5h \| Maternal Treatment (injection):saline
F6	Sample source:Pool \| Developmental Timepoint:- \| Collection Timepoint:- \| Maternal Treatment (injection):-

Data matrix