Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST003887)

(Analysis AN006384)

Metabolite	Structure	F1	F2	F3	F4	F5	F6
Cytidine_C12 PARENT	ME1027121	1.17	0.70	0.91	3.33	0.83	1.26
Hypoxanthine_C12 PARENT	ME1027158	2.52	0.71	1.06	3.05	0.95	0.99
Hypoxanthine_C13-label-4	ME1027162	0.31	NA	NA	NA	1.08	0.29
Glycine_C13-label-1	ME1027229	0.62	1.49	1.73	0.59	0.31	0.35
Serine_C13-label-1	ME1027202	1.16	1.94	1.66	0.06	0.24	0.12
Glycine_C12 PARENT	ME1027228	1.43	1.41	1.82	0.50	0.25	0.39
Serine_C12 PARENT	ME1027201	1.43	1.34	2.17	0.28	0.15	0.15
Creatine_C13-label-2	ME1027115	0.76	1.58	0.51	1.18	1.96	0.57
Asparagine_C13-label-2	ME1027101	0.44	2.14	0.68	0.60	1.05	0.48
Cytosine_C13-label-1	ME1027127	0.63	1.94	0.65	0.67	1.47	0.53
Serine_C13-label-2	ME1027203	0.22	2.45	1.27	0.48	0.37	0.30
Serine_C13-label-3	ME1027204	0.01	2.68	0.88	0.03	0.81	0.32
Glycine_C13-label-2	ME1027230	0.08	2.46	0.95	0.12	0.84	0.35
Guanidineacetic acid_C12 PARENT	ME1027146	0.19	2.37	1.07	0.13	0.79	0.31
Adenosine_C13-label-7	ME1027089	NA	1.17	0.01	NA	1.10	NA
Adenosine_C13-label-8	ME1027090	NA	1.09	0.94	NA	0.97	NA
Inosine_C13-label-3	ME1027166	NA	1.29	0.97	NA	1.03	0.10
Acetylputrescine_C13-label-2	ME1027085	NA	1.30	0.44	NA	1.03	0.18
Guanidineacetic acid_C13-label-3	ME1027148	NA	1.29	0.54	NA	1.25	0.42
Glutamine_C13-label-5	ME1027140	NA	1.88	0.63	NA	0.53	0.38
Aspartate_C13-label-3	ME1027104	0.04	1.78	0.56	NA	0.77	0.58
Glutamine_C13-label-4	ME1027139	NA	1.81	0.46	NA	0.95	0.44
Proline_C13-label-4	ME1027195	NA	2.20	0.49	NA	1.48	0.29
Proline_C13-label-3	ME1027194	NA	1.94	0.47	NA	1.41	0.33
Proline_C13-label-5	ME1027196	NA	1.93	0.50	NA	1.55	0.28
Guanidineacetic acid_C13-label-2	ME1027147	NA	2.10	0.38	0.03	1.83	0.17
Proline_C13-label-2	ME1027193	0.10	2.23	0.45	0.12	1.79	0.42
Glutamate_C13-label-4	ME1027134	0.01	1.75	0.94	0.01	1.61	0.32
Glutamate_C13-label-5	ME1027135	0.03	1.83	0.93	0.04	1.44	0.38
Glutamate_C13-label-2	ME1027132	0.01	1.78	0.83	0.01	1.49	0.49
Glutamate_C13-label-3	ME1027133	0.02	1.82	0.86	0.01	1.55	0.41
Creatine phosphate_C12 PARENT	ME1027116	NA	1.58	0.77	NA	1.49	0.58
Methionine_C13-label-4	ME1027174	NA	1.57	0.96	NA	1.26	0.54
Aspartate_C13-label-2	ME1027105	0.34	1.63	0.57	NA	1.52	0.64
Phosphocholine_C12 PARENT	ME1027189	0.01	1.91	0.52	0.03	1.26	0.86
Phosphocholine_C13-label-1	ME1027190	NA	1.76	0.55	NA	1.40	0.79
Creatine_C12 PARENT	ME1027113	0.10	0.12	1.60	0.13	0.12	1.54
Cytidine_C13-label-7	ME1027125	NA	NA	1.07	NA	0.90	0.81
Hypoxanthine_C13-label-2	ME1027160	0.18	0.79	0.60	0.51	0.96	1.48
Cystine_C13-label-2	ME1027082	0.86	0.67	1.21	0.52	0.63	1.20
Inosine_C12 PARENT	ME1027163	0.46	0.63	1.06	0.60	0.84	1.28
Pyridoxine_C12 PARENT	ME1027197	0.42	0.52	1.21	0.54	0.75	1.27
Nicotinamide_C12 PARENT	ME1027180	1.13	0.78	1.14	0.16	0.85	1.11
Glycerophosphocholine_C13-label-1	ME1027142	0.62	0.99	0.96	0.43	1.04	1.06
Histidine_C12 PARENT	ME1027153	0.77	1.07	0.98	0.02	1.09	0.98
Glycerophosphocholine_C13-label-4	ME1027145	NA	0.80	1.03	NA	NA	0.99
Xanthine_C13-label-5	ME1027227	NA	1.30	0.95	NA	0.10	1.08
Cytidine_C13-label-4	ME1027122	NA	1.00	1.17	NA	1.10	0.49
Cytidine_C13-label-6	ME1027124	NA	0.93	1.54	NA	0.81	0.33
Glycerophosphocholine_C13-label-3	ME1027144	NA	0.46	1.19	NA	0.42	1.41
Inosine_C13-label-1	ME1027164	NA	0.69	0.78	NA	0.79	1.16
Inosine_C13-label-5	ME1027167	NA	0.80	0.98	0.42	0.72	1.19
Guanine_C12 PARENT	ME1027149	0.05	0.80	1.13	0.16	0.78	1.20
Guanine_C13-label-1	ME1027150	NA	0.68	1.27	NA	0.67	1.09
Adenine_C13-label-3	ME1027094	NA	0.86	0.49	NA	1.35	1.20
Acetylputrescine_C13-label-1	ME1027084	NA	1.00	0.87	NA	1.32	0.80
Hypoxanthine_C13-label-3	ME1027161	NA	1.03	0.66	NA	1.44	0.99
Methionine_C13-label-3	ME1027173	NA	1.49	0.96	NA	0.85	0.72
Methionine_C13-label-5	ME1027175	NA	1.20	1.03	NA	0.61	1.10
Methylnicotinamide_C12 PARENT	ME1027176	0.13	1.31	0.91	0.14	0.86	1.06
Cytidine_C13-label-5	ME1027123	NA	1.09	1.01	0.25	1.15	0.87
Inosine_C13-label-7	ME1027169	NA	0.89	1.20	NA	1.04	1.00
Adenosine_C13-label-5	ME1027087	NA	1.17	0.92	NA	0.89	1.00
Adenosine_C13-label-6	ME1027088	NA	1.06	0.98	NA	0.90	1.07
Tyrosine_C13-label-5	ME1027224	NA	1.05	1.00	NA	0.89	1.01
Adenine_C13-label-2	ME1027093	NA	0.88	0.87	NA	1.08	1.07
Methylnicotinamide_C13-label-1	ME1027177	NA	1.00	0.91	NA	0.99	1.10
Creatine phosphate_C13-label-1	ME1027117	NA	1.07	1.03	NA	0.94	0.79
Guanine_C13-label-4	ME1027151	NA	1.29	1.07	NA	0.86	0.84
Phenylalanine_C12 PARENT	ME1027185	1.75	0.85	1.01	0.13	1.20	0.96
Proline_C12 PARENT	ME1027191	2.18	0.88	1.07	0.28	0.87	1.06
Glutamate_C12 PARENT	ME1027130	1.74	0.91	0.99	1.21	1.02	1.00
Hypoxanthine_C13-label-1	ME1027159	1.95	0.76	0.97	1.48	0.81	1.22
Adenine_C12 PARENT	ME1027091	1.22	1.28	0.79	2.19	1.24	0.83
Creatine_C13-label-1	ME1027114	1.40	1.46	0.68	1.85	1.56	0.65
Thiamine_C13-label-6	ME1027210	0.75	0.91	0.99	1.98	1.13	0.95
Adenine_C13-label-1	ME1027092	0.82	1.59	0.64	1.92	1.60	0.59
Inosine_C13-label-6	ME1027168	0.61	1.39	0.80	2.05	1.06	0.88
Adenosine_C12 PARENT	ME1027086	0.78	1.29	0.67	1.78	1.44	0.83
Threonine_C13-label-2	ME1027213	0.52	1.31	0.76	1.70	1.33	0.85
Glutamine_C13-label-2	ME1027138	0.62	1.49	0.84	0.90	1.29	0.72
Thiamine_C13-label-1	ME1027208	1.03	1.14	0.91	0.59	1.17	0.92
Thiamine_C13-label-2	ME1027209	0.89	1.10	1.02	0.64	1.12	0.87
Creatinine_C13-label-1	ME1027119	1.13	1.04	0.85	0.75	1.20	1.01
Arginine_C13-label-1	ME1027097	1.14	1.26	0.88	0.84	1.04	0.94
Carnitine_C12 PARENT	ME1027106	1.15	1.19	0.86	0.92	1.13	0.94
Histidine_C13-label-1	ME1027154	0.65	1.23	0.96	0.82	1.01	0.91
Histidine_C13-label-2	ME1027155	0.51	1.22	1.02	0.89	0.96	0.93
Glutamate_C13-label-1	ME1027131	0.57	1.14	0.89	0.79	1.19	0.94
Glycerophosphocholine_C12 PARENT	ME1027141	0.60	1.05	0.92	0.90	1.10	1.01
Asparagine_C12 PARENT	ME1027099	0.59	1.05	1.01	0.85	0.70	1.17
Glycerophosphocholine_C13-label-2	ME1027143	0.51	0.96	1.17	0.73	0.86	0.96
Cytosine_C12 PARENT	ME1027126	1.02	1.36	0.86	1.47	1.40	0.66
Arginine_C13-label-2	ME1027098	0.58	1.08	0.96	1.43	1.00	0.99
Nicotinamide_C13-label-4	ME1027184	0.54	1.13	0.97	1.36	1.09	0.90
Dimethyl-arginine_C12 PARENT	ME1027128	0.55	1.26	0.83	1.47	1.19	0.90
Pyridoxine_C13-label-2	ME1027199	0.53	1.14	0.86	1.35	1.21	0.94
Guanine_C13-label-5	ME1027152	1.35	1.03	0.90	1.46	0.99	1.03
Creatinine_C13-label-2	ME1027120	1.12	1.00	0.98	1.38	1.11	0.94
Carnitine_C13-label-1	ME1027107	1.01	1.06	1.01	1.29	1.08	0.89
Creatinine_C12 PARENT	ME1027118	0.95	1.13	0.93	1.28	1.10	0.92
Dimethyl-arginine_C13-label-1	ME1027129	0.92	1.18	0.88	1.40	1.21	0.89
Methylnicotinamide_C13-label-3	ME1027178	0.78	1.08	0.94	1.48	1.14	0.92
Arginine_C12 PARENT	ME1027096	0.87	1.07	0.95	1.38	1.05	0.96
Nicotinamide_C13-label-1	ME1027181	1.00	1.10	0.97	1.51	1.01	0.94
Citrulline_C12 PARENT	ME1027111	0.95	1.09	0.95	1.46	1.03	0.97
Nicotinamide_C13-label-2	ME1027182	0.94	1.08	0.95	1.45	1.06	0.94
Nicotinamide_C13-label-3	ME1027183	1.07	1.00	0.96	1.54	1.04	0.99
Phenylalanine_C13-label-5	ME1027188	1.10	1.06	1.00	1.55	0.90	1.00
Citrulline_C13-label-1	ME1027112	1.08	1.19	0.91	1.54	1.04	0.93
Trimethylglycine (Betaine)_C13-label-1	ME1027215	1.20	1.11	0.82	1.51	1.14	1.00
Proline_C13-label-1	ME1027192	1.16	1.20	0.84	1.49	1.18	0.90
Pyridoxine_C13-label-1	ME1027198	1.18	1.12	0.90	1.52	1.17	0.90
Thiamine_C12 PARENT	ME1027207	1.06	1.29	0.81	1.29	1.04	0.98
Tryptophan_C13-label-8	ME1027220	0.85	1.19	0.84	1.23	1.11	0.98
Pyridoxine_C13-label-3	ME1027200	0.82	1.20	0.77	1.38	0.97	1.14
Xanthine_C13-label-1	ME1027226	0.80	1.17	0.96	1.45	0.86	1.02
Acetyl-arginine_C13-label-1	ME1027078	0.63	0.92	1.00	1.47	0.84	1.14
Acetyl-arginine_C12 PARENT	ME1027077	0.61	0.89	1.08	1.40	0.75	1.14
Threonine_C13-label-1	ME1027212	0.60	0.90	1.12	1.42	0.78	1.07
Methionine_C12 PARENT	ME1027170	0.72	0.80	1.07	1.25	0.96	1.07
Methionine_C13-label-2	ME1027172	0.56	0.84	1.07	1.09	0.80	1.17
Taurine_C12 PARENT	ME1027205	0.58	0.80	1.11	1.17	0.85	1.10
Taurine_C13-label-1	ME1027206	0.59	0.77	0.98	1.15	0.72	1.32
Lysine_C12 PARENT	ME1027231	0.60	0.87	0.94	1.01	0.84	1.26
Threonine_C12 PARENT	ME1027211	0.64	0.73	0.98	0.96	0.93	1.25
Cystine_C13-label-1	ME1027081	0.98	0.74	1.07	1.36	0.71	1.25
Cystine_C12 PARENT	ME1027080	0.94	0.76	1.12	1.32	0.78	1.15
Lysine_C13-label-2	ME1027233	0.92	0.77	1.05	1.26	0.74	1.22
Asparagine_C13-label-1	ME1027100	0.96	0.79	1.11	1.14	0.85	1.10
Tyrosine_C13-label-1	ME1027222	0.87	0.80	1.14	1.20	0.74	1.13
Choline_C13-label-1	ME1027109	0.89	0.51	1.12	0.96	0.73	1.34
Hypotaurine_C12 PARENT	ME1027156	1.07	0.65	1.15	1.07	0.72	1.22
Tyrosine_C13-label-2	ME1027223	0.87	0.70	1.09	1.05	0.72	1.26
Methionine_C13-label-1	ME1027171	1.00	0.79	1.07	0.90	0.90	1.12
Acetylputrescine_C12 PARENT	ME1027083	0.97	1.18	0.94	1.04	0.99	0.95
Trimethylglycine (Betaine)_C13-label-2	ME1027216	0.98	0.92	0.96	1.11	1.00	1.09
Trimethylglycine (Betaine)_C12 PARENT	ME1027214	0.87	1.00	1.00	1.08	0.99	1.01
Aspartate_C12 PARENT	ME1027102	0.83	0.94	1.04	1.06	0.94	1.04
Aspartate_C13-label-1	ME1027103	0.80	0.98	1.01	1.10	0.92	1.06
Choline_C13-label-2	ME1027110	1.42	0.67	1.14	1.71	0.64	1.22
Choline_C12 PARENT	ME1027108	1.22	0.60	1.14	1.47	0.83	1.17
Glutamine_C12 PARENT	ME1027136	1.27	0.84	1.03	1.67	0.95	1.05
Tryptophan_C13-label-2	ME1027219	1.24	0.89	1.05	1.73	0.79	1.10
Tryptophan_C13-label-1	ME1027218	1.02	0.80	1.11	1.69	0.79	1.11
Tyrosine_C12 PARENT	ME1027221	1.07	0.79	1.09	1.61	0.75	1.15
Lysine_C13-label-1	ME1027232	0.99	0.76	1.08	1.48	0.81	1.16
Phenylalanine_C13-label-1	ME1027186	1.01	0.88	1.01	1.50	0.88	1.12
Phenylalanine_C13-label-2	ME1027187	0.91	0.91	0.97	1.51	0.87	1.14
Tryptophan_C12 PARENT	ME1027217	0.07	0.97	1.01	1.98	0.84	1.09
Inosine_C13-label-10	ME1027165	NA	0.65	1.08	1.07	1.11	0.99
Glutamine_C13-label-1	ME1027137	0.02	0.95	0.95	1.24	0.98	1.12
Xanthine_C12 PARENT	ME1027225	0.29	0.93	1.00	1.29	0.89	1.12

Factors:

F1	Medium:Control \| \| Genotype:Fresh Medium control
F2	Medium:Control \| \| Genotype:KP
F3	Medium:Control \| \| Genotype:PGKP
F4	Medium:woSer/Gly \| \| Genotype:Fresh Medium no Ser/Gly
F5	Medium:woSer/Gly \| \| Genotype:KP
F6	Medium:woSer/Gly \| \| Genotype:PGKP

Data matrix