Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST004057)

(Analysis AN006704)

Metabolite	Structure	F1	F2	F3	F4	F5	F6	F7	F8	F9	F10	F11	F12	F13	F14
DG 40:6	ME1078658	0.55	0.84	0.29	1.02	0.97	0.44	0.36	0.32	0.38	2.14	9.16	0.59	0.75	NA
CAR 16:0	ME1078632	0.01	0.01	0.01	0.01	0.01	4.43	2.57	4.87	2.64	0.01	0.01	0.01	0.01	NA
CAR 18:1	ME1078635	0.01	0.01	0.01	0.00	0.01	4.41	2.82	4.50	2.68	0.01	0.01	0.01	0.00	NA
CAR 18:0	ME1078634	0.01	0.01	0.01	0.01	0.01	4.06	3.34	3.89	2.80	0.01	0.01	0.01	0.01	NA
CAR 20:1	ME1078637	0.00	0.00	0.00	0.00	0.00	4.46	3.12	3.81	2.85	0.00	0.00	0.00	0.00	NA
HexCer 18:1(4E);3OH/25:1(16Z)//18:1(4E);3OH/24:2(15Z,18Z);2OH	ME1078691	0.52	0.72	0.42	0.52	0.67	4.12	2.45	2.76	3.61	0.80	0.61	0.49	0.68	0.25
LPE 22:4(7Z,10Z,13Z,16Z)	ME1078709	0.50	0.29	0.66	0.33	0.30	3.52	3.35	2.71	2.87	0.34	0.28	0.52	0.24	0.78
SM 18:1(4E);3OH/16:0	ME1078735	0.59	0.67	0.59	0.67	0.53	3.54	2.80	2.49	2.39	0.64	0.64	0.57	0.67	0.61
SM 18:1(4E);3OH/24:1(15Z)	ME1078745	0.62	0.97	0.54	0.70	0.69	3.32	2.41	2.25	2.63	0.98	0.74	0.60	0.73	0.48
DG 34:2	ME1078645	0.72	1.21	0.39	1.05	1.15	1.12	0.44	0.49	0.43	2.51	4.37	0.76	1.31	NA
DG 36:1	ME1078647	0.90	1.71	0.31	1.43	1.58	0.18	0.09	0.12	0.11	2.63	4.28	0.97	1.75	NA
DG 34:1	ME1078644	0.94	1.65	0.37	1.34	1.49	0.39	0.19	0.20	0.18	2.34	3.96	0.94	1.71	NA
DG 36:2	ME1078648	0.86	1.62	0.31	1.16	1.38	0.51	0.18	0.23	0.18	2.62	4.22	0.91	1.77	NA
DG 32:0	ME1078642	0.92	1.41	0.43	1.71	1.66	0.45	0.31	0.27	0.26	2.02	3.83	0.93	1.55	NA
DG 34:0	ME1078643	0.93	1.56	0.38	1.71	1.68	0.31	0.27	0.28	0.26	2.45	3.16	0.95	1.66	NA
DG 38:6	ME1078655	0.78	0.95	0.56	1.02	1.14	NA	NA	NA	NA	1.87	2.66	0.75	0.98	NA
DG 40:4	ME1078657	0.61	1.41	0.20	1.29	1.14	NA	NA	NA	NA	2.64	2.67	0.58	1.12	NA
DG 38:1	ME1078650	0.92	1.62	0.36	1.95	1.71	0.39	0.44	0.43	0.44	1.81	2.24	1.08	1.77	NA
DG 38:2	ME1078651	0.84	1.76	0.28	1.48	1.63	0.44	0.44	0.42	0.42	2.36	2.52	1.00	1.87	NA
DG 38:4	ME1078653	0.88	1.45	0.42	1.33	1.50	0.58	0.31	0.29	0.31	3.42	3.07	0.77	1.30	NA
DG 36:4	ME1078649	1.03	1.59	0.65	1.50	1.59	0.46	0.28	0.32	0.27	2.91	1.83	0.91	1.41	NA
DG 38:5	ME1078654	1.00	1.55	0.49	1.14	1.59	0.86	0.37	0.28	0.35	3.27	2.10	0.79	1.24	NA
DG 40:8	ME1078660	0.65	1.23	0.35	1.55	3.28	0.90	1.20	1.14	1.19	0.95	1.65	0.80	1.11	NA
HexCer 18:1(4E);3OH/24:0;2OH	ME1078685	0.88	NA	0.82	NA	NA	1.61	1.09	1.21	1.41	NA	NA	0.86	NA	0.79
LPE 18:1(9Z)	ME1078706	0.82	0.46	0.97	0.46	0.45	2.69	1.86	1.42	1.62	0.51	0.42	0.80	0.39	1.21
LPE P-18:1(9Z)	ME1078713	0.71	0.79	0.79	0.65	0.72	2.48	2.21	1.51	1.47	0.83	0.90	0.82	0.78	0.99
PC P-16:0/18:0//P-18:0/16:0//O-18:1(9Z)/16:0//O-16:0/18:1(9Z)	ME1078733	0.81	0.69	0.79	0.72	0.77	2.27	2.07	1.68	1.78	0.75	0.69	0.80	0.70	0.83
SM 18:1(4E);3OH/18:1(9Z)	ME1078737	0.77	0.60	0.84	0.64	0.68	2.07	2.35	1.63	1.63	0.72	0.69	0.81	0.62	1.00
PC O-18:0/18:1(9Z)//P-18:0/18:0	ME1078731	0.90	0.67	0.89	0.60	0.68	1.85	1.77	1.76	1.51	0.58	0.53	0.90	0.53	1.03
PC O-16:0/18:0	ME1078729	0.73	0.64	0.79	0.52	0.69	1.88	2.53	1.94	1.88	0.58	0.70	0.80	0.58	0.97
LPE 22:6(4Z,7Z,10Z,13Z,16Z,19Z)	ME1078710	0.76	0.51	0.97	0.56	0.55	1.92	2.03	1.83	1.75	0.60	0.56	0.79	0.51	1.12
LPE P-18:0	ME1078712	0.78	0.48	0.83	0.44	0.41	1.97	2.27	1.87	1.70	0.56	0.67	0.93	0.48	0.98
LPE 20:4(5Z,8Z,11Z,14Z)	ME1078708	0.69	0.38	0.87	0.42	0.42	2.55	2.72	1.92	1.89	0.48	0.44	0.67	0.36	1.18
PC 16:1(9Z)/16:0//14:1(9Z)/18:0	ME1078719	0.74	0.59	0.73	0.72	0.67	2.69	2.50	2.13	2.16	0.56	0.56	0.67	0.60	0.70
PC 16:0/18:2(9Z,12Z)	ME1078717	0.69	0.70	0.64	0.63	0.64	2.78	2.49	2.68	2.10	0.60	0.65	0.69	0.69	0.65
PC 18:1(9Z)/18:2(9Z,12Z)//16:0/20:3(8Z,11Z,14Z)	ME1078724	0.70	0.69	0.71	0.65	0.64	2.21	2.55	2.60	2.15	0.60	0.67	0.69	0.70	0.67
FFA 18:2	ME1078670	0.51	0.54	NA	0.66	0.67	2.28	1.49	1.68	1.09	0.60	0.76	0.54	0.57	NA
FFA 22:4	ME1078672	0.55	0.53	NA	0.58	0.54	1.63	1.78	1.59	1.71	0.48	0.54	0.44	0.42	NA
FFA 16:0	ME1078666	0.80	0.66	NA	0.75	0.78	1.47	1.47	1.37	1.32	0.70	0.72	0.67	0.65	NA
FFA 18:1	ME1078669	0.72	0.78	NA	0.84	0.71	1.70	1.43	1.29	1.25	0.65	0.69	0.67	0.67	NA
FFA 20:4	ME1078671	0.72	0.75	NA	0.84	0.92	1.11	1.46	1.19	1.15	0.82	0.90	0.92	0.79	NA
FFA 18:0	ME1078668	0.69	0.81	NA	0.83	0.68	1.14	1.46	1.29	1.29	0.74	0.78	0.79	0.85	NA
FFA 22:6	ME1078673	0.78	0.76	NA	0.78	0.78	1.19	1.57	1.43	1.30	0.69	0.77	0.67	0.64	NA
HexCer 18:1(4E);3OH/24:1(9Z);2OH//18:1(4E);3OH/25:0	ME1078687	0.92	1.30	0.75	0.90	1.21	1.85	1.14	1.46	1.53	1.46	1.18	0.86	1.21	0.48
HexCer 18:1(4E);3OH/24:2(15Z,18Z)	ME1078688	0.81	1.27	0.73	0.90	1.14	2.29	1.34	1.38	1.95	1.32	1.01	0.82	1.15	0.44
LPE 16:0	ME1078703	0.96	0.48	1.05	0.50	0.44	1.37	1.61	0.99	1.03	0.48	0.59	1.05	0.44	1.44
LPE 18:0	ME1078705	0.97	0.52	1.00	0.54	0.43	1.30	1.78	1.34	1.23	0.51	0.64	1.01	0.46	1.18
PC 18:0/18:2(9Z,12Z)//18:1(9Z)/18:1(9Z)	ME1078721	0.87	0.81	0.85	0.78	0.82	1.73	1.64	1.60	1.55	0.90	0.75	0.89	0.86	0.85
PC 16:0/18:1(9Z)	ME1078716	0.89	0.88	0.89	0.87	0.84	1.44	1.53	1.38	1.34	0.83	0.77	0.93	0.83	1.05
SM 18:1(4E);3OH/18:0	ME1078736	0.85	0.79	0.86	0.93	0.86	1.57	1.67	1.50	1.45	0.80	0.76	0.93	0.73	1.01
LPC 18:1(9Z)	ME1078700	0.84	1.00	0.85	0.83	1.07	1.70	1.98	1.74	1.51	0.85	0.94	0.75	0.83	0.79
LPC 20:4(5Z,8Z,11Z,14Z)	ME1078701	0.79	0.98	0.87	0.65	0.98	1.72	2.23	1.84	1.44	0.88	1.16	0.72	0.96	0.69
PC 18:2(9Z,12Z)/18:2(9Z,12Z)//16:0/20:4(5Z,8Z,11Z,14Z)	ME1078727	1.01	0.92	0.97	1.01	1.00	1.22	1.36	1.19	1.20	0.94	0.00	0.99	0.94	0.92
PC 16:0/16:0	ME1078715	0.96	0.95	0.97	0.89	0.97	0.95	1.08	0.94	0.89	0.87	0.88	1.06	0.88	1.31
PC 18:1(9Z)/20:4(5Z,8Z,11Z,14Z)//16:0/22:5(4Z,7Z,10Z,13Z,16Z)	ME1078725	1.01	0.91	1.02	1.06	0.96	1.16	1.18	1.01	1.03	0.92	0.87	0.97	0.90	0.93
PC 18:0/18:1(9Z)	ME1078720	0.94	0.92	0.91	0.88	0.95	1.22	1.30	1.19	1.19	1.08	0.86	0.99	0.97	0.95
PC 18:2(9Z,12Z)/20:2(11Z,14Z)//18:0/20:4(5Z,8Z,11Z,14Z)	ME1078728	0.97	0.88	0.96	1.03	0.95	1.11	1.28	1.17	1.13	0.98	0.90	0.99	0.92	0.92
LPC 16:0	ME1078698	0.95	0.96	0.93	1.02	1.00	1.26	1.48	1.35	1.28	0.84	0.91	0.85	0.85	0.99
LPC 18:0	ME1078699	1.02	1.01	0.98	1.13	0.92	1.00	1.34	1.23	1.20	0.88	0.88	0.85	0.81	0.99
CAR 20:4	ME1078638	0.96	0.76	1.37	0.76	0.79	NA	NA	NA	NA	0.75	0.83	1.19	0.83	NA
CAR 14:0	ME1078631	0.99	0.93	1.43	0.78	0.85	NA	NA	NA	NA	0.66	0.79	1.11	0.72	NA
CAR 16:1	ME1078633	0.94	0.97	1.47	0.66	0.77	NA	NA	NA	NA	0.56	0.75	1.27	0.69	NA
LPE 16:1(7Z)	ME1078704	1.12	0.26	1.32	0.17	0.18	0.67	0.67	0.39	0.39	0.33	0.48	1.27	0.32	2.09
LPE P-16:0	ME1078711	1.02	0.58	1.05	0.52	0.50	NA	NA	NA	NA	0.60	0.85	1.19	0.54	1.36
LPC 14:1(5Z)	ME1078697	1.00	0.35	1.16	0.24	0.30	NA	NA	NA	NA	0.52	0.57	1.10	0.50	1.76
LPE 20:1(11Z)	ME1078707	0.96	0.60	1.22	0.56	0.58	NA	NA	NA	NA	0.67	0.34	1.02	0.40	1.65
DG 44:3	ME1078662	0.98	2.31	0.35	1.37	1.45	0.76	0.76	0.65	0.68	1.32	0.38	0.99	2.16	NA
HexCer 18:1(4E);3OH/23:0//18:1(4E);3OH/22:1(13Z);2OH	ME1078683	1.09	1.88	0.92	1.40	1.71	0.79	0.49	0.48	0.70	1.66	1.42	0.96	1.64	0.49
HexCer 18:1(4E);3OH/22:0	ME1078678	1.15	1.95	0.96	1.34	1.66	0.32	0.24	0.20	0.36	1.76	1.51	1.07	1.72	0.64
HexCer 18:1(4E);3OH/22:0;2OH	ME1078679	1.17	1.64	0.97	1.30	1.61	0.31	0.23	0.26	0.31	1.74	1.52	1.10	1.67	0.73
HexCer 18:1(4E);3OH/18:0;2OH	ME1078675	0.99	1.14	0.94	0.90	1.18	NA	NA	NA	NA	1.13	1.16	1.01	1.11	0.89
HexCer 18:1(4E);3OH/20:0	ME1078676	0.99	1.49	0.89	1.24	1.63	NA	NA	NA	NA	1.47	1.75	0.87	1.55	0.39
HexCer 18:1(4E);3OH/20:0;2OH	ME1078677	1.00	1.40	0.89	1.10	1.38	NA	NA	NA	NA	1.51	1.51	0.88	1.44	0.58
HexCer 18:1(4E);3OH/22:1(13Z)	ME1078680	0.99	1.55	0.91	1.09	1.38	NA	NA	NA	NA	1.41	1.32	0.96	1.36	0.47
DG 40:7	ME1078659	0.85	1.31	0.48	1.75	1.92	0.77	0.95	0.86	0.87	1.26	1.11	1.02	1.41	NA
HexCer 18:1(4E);3OH/23:0;2OH	ME1078682	0.99	1.54	0.80	1.14	1.44	1.34	0.88	1.10	1.17	1.56	1.31	0.91	1.56	0.41
HexCer 18:1(4E);3OH/24:1(15Z)	ME1078686	1.04	1.66	0.85	1.11	1.38	1.08	0.70	0.69	1.02	1.63	1.24	0.98	1.49	0.55
HexCer 18:1(4E);3OH/18:0	ME1078674	0.96	1.25	0.87	0.95	1.06	1.58	1.07	0.89	1.30	1.19	1.13	0.91	1.23	0.75
LPC 22:6(4Z,7Z,10Z,13Z,16Z,19Z)	ME1078702	0.99	1.29	0.89	0.92	0.85	1.05	1.37	1.13	0.88	1.36	1.47	0.86	1.48	0.70
HexCer 18:1(4E);3OH/24:0	ME1078684	1.17	1.43	0.91	0.98	1.23	0.68	0.52	0.49	0.71	1.38	1.11	1.15	1.31	NA
SM 18:1(4E);3OH/22:0	ME1078741	1.07	1.12	1.05	0.95	1.03	0.68	0.61	0.54	0.59	1.17	0.99	1.15	1.07	1.15
PC 18:1(9Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)//18:2(9Z,12Z)/22:5(4Z,7Z,10Z,13Z,16Z)	ME1078726	1.11	1.16	1.07	1.13	1.04	0.59	0.59	0.57	0.56	1.18	1.03	1.12	1.13	1.00
PC 16:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z)//18:2(9Z,12Z)/20:4(5Z,8Z,11Z,14Z)	ME1078718	1.09	1.19	1.00	1.19	1.07	0.71	0.73	0.67	0.65	1.19	1.05	1.10	1.18	0.92
PC 18:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z)	ME1078723	1.07	1.24	1.00	1.20	1.02	0.65	0.68	0.65	0.60	1.29	1.02	1.11	1.20	0.98

Factors:

F1	Subject_ID:5xFAD \| Treatment:OSD chow \| Subject Species:Mus musculus \| Sex:Female \| Sample source:Cerebrum
F2	Subject_ID:5xFAD \| Treatment:OSD chow \| Subject Species:Mus musculus \| Sex:Male \| Sample source:Cerebrum
F3	Subject_ID:5xFAD \| Treatment:PLX5622 \| Subject Species:Mus musculus \| Sex:Female \| Sample source:Cerebrum
F4	Subject_ID:5xFIRE \| Treatment:OSD chow \| Subject Species:Mus musculus \| Sex:Female \| Sample source:Cerebrum
F5	Subject_ID:5xFIRE \| Treatment:OSD chow \| Subject Species:Mus musculus \| Sex:Male \| Sample source:Cerebrum
F6	Subject_ID:AD \| Treatment:/ \| Subject Species:Human \| Sex:Female \| Sample source:Brodmann area 38
F7	Subject_ID:AD \| Treatment:/ \| Subject Species:Human \| Sex:Male \| Sample source:Brodmann area 38
F8	Subject_ID:Control \| Treatment:/ \| Subject Species:Human \| Sex:Female \| Sample source:Brodmann area 38
F9	Subject_ID:Control \| Treatment:/ \| Subject Species:Human \| Sex:Male \| Sample source:Brodmann area 38
F10	Subject_ID:FIRE \| Treatment:OSD chow \| Subject Species:Mus musculus \| Sex:Female \| Sample source:Cerebrum
F11	Subject_ID:FIRE \| Treatment:OSD chow \| Subject Species:Mus musculus \| Sex:Male \| Sample source:Cerebrum
F12	Subject_ID:Non-tansgenic \| Treatment:OSD chow \| Subject Species:Mus musculus \| Sex:Female \| Sample source:Cerebrum
F13	Subject_ID:Non-tansgenic \| Treatment:OSD chow \| Subject Species:Mus musculus \| Sex:Male \| Sample source:Cerebrum
F14	Subject_ID:Non-tansgenic \| Treatment:PLX5622 \| Subject Species:Mus musculus \| Sex:Female \| Sample source:Cerebrum

Data matrix