Clustering data with heatmap algorithm for (Study ST003484)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1Growth condition:Attached | time (h):0 | treatment:none
F2Growth condition:Attached | time (h):24 | treatment:10µM 68c091
F3Growth condition:Attached | time (h):24 | treatment:10µM AT0174
F4Growth condition:Attached | time (h):24 | treatment:1µM AT0174
F5Growth condition:Attached | time (h):24 | treatment:DMSO
F6Growth condition:Attached | time (h):24 | treatment:NFkB cocktail 10 ng/ml IL1b + 10 ng/ml TNFa
F7Growth condition:Attached | time (h):24 | treatment:Vehicle
F8Growth condition:Attached | time (h):48 | treatment:10µM 68c091
F9Growth condition:Attached | time (h):48 | treatment:10µM AT0174
F10Growth condition:Attached | time (h):48 | treatment:1µM AT0174
F11Growth condition:Attached | time (h):48 | treatment:DMSO
F12Growth condition:Attached | time (h):48 | treatment:NFkB cocktail 10 ng/ml IL1b + 10 ng/ml TNFa
F13Growth condition:Attached | time (h):48 | treatment:none
F14Growth condition:Attached | time (h):48 | treatment:Vehicle
F15Growth condition:Attached | time (h):72 | treatment:none
F16Growth condition:Suspension | time (h):0 | treatment:none
F17Growth condition:Suspension | time (h):24 | treatment:10µM 68c091
F18Growth condition:Suspension | time (h):24 | treatment:10µM AT0174
F19Growth condition:Suspension | time (h):24 | treatment:1µM AT0174
F20Growth condition:Suspension | time (h):24 | treatment:DMSO
F21Growth condition:Suspension | time (h):24 | treatment:NFkB cocktail 10 ng/ml IL1b + 10 ng/ml TNFa
F22Growth condition:Suspension | time (h):24 | treatment:Vehicle
F23Growth condition:Suspension | time (h):48 | treatment:10µM 68c091
F24Growth condition:Suspension | time (h):48 | treatment:10µM AT0174
F25Growth condition:Suspension | time (h):48 | treatment:1µM AT0174
F26Growth condition:Suspension | time (h):48 | treatment:DMSO
F27Growth condition:Suspension | time (h):48 | treatment:NFkB cocktail 10 ng/ml IL1b + 10 ng/ml TNFa
F28Growth condition:Suspension | time (h):48 | treatment:none
F29Growth condition:Suspension | time (h):48 | treatment:Vehicle
F30Growth condition:Suspension | time (h):72 | treatment:none
Data matrix
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