Clustering data with heatmap algorithm for (Study ST000676)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1AGE:16 week | DIET:Control | SAMPLE_TYPE:Dorsal root ganglia
F2AGE:16 week | DIET:Control | SAMPLE_TYPE:plasma
F3AGE:16 week | DIET:control | SAMPLE_TYPE:Sciatic nerve
F4AGE:16 week | DIET:HF | SAMPLE_TYPE:Dorsal root ganglia
F5AGE:16 week | DIET:HF | SAMPLE_TYPE:plasma
F6AGE:16 week | DIET:HF | SAMPLE_TYPE:Sciatic nerve
F7AGE:16 week | DIET:HF STZ | SAMPLE_TYPE:Dorsal root ganglia
F8AGE:16 week | DIET:HF STZ | SAMPLE_TYPE:plasma
F9AGE:16 week | DIET:HF STZ | SAMPLE_TYPE:Sciatic nerve
F10AGE:24 week | DIET:Control | SAMPLE_TYPE:Dorsal root ganglia
F11AGE:24 week | DIET:Control | SAMPLE_TYPE:plasma
F12AGE:24 week | DIET:control | SAMPLE_TYPE:Sciatic nerve
F13AGE:24 week | DIET:HF DR | SAMPLE_TYPE:Dorsal root ganglia
F14AGE:24 week | DIET:HF DR | SAMPLE_TYPE:plasma
F15AGE:24 week | DIET:HF DR | SAMPLE_TYPE:Sciatic nerve
F16AGE:24 week | DIET:HF | SAMPLE_TYPE:Dorsal root ganglia
F17AGE:24 week | DIET:HF | SAMPLE_TYPE:plasma
F18AGE:24 week | DIET:HF | SAMPLE_TYPE:Sciatic nerve
F19AGE:24 week | DIET:HF STZ DR | SAMPLE_TYPE:Dorsal root ganglia
F20AGE:24 week | DIET:HF STZ DR | SAMPLE_TYPE:plasma
F21AGE:24 week | DIET:HF STZ DR | SAMPLE_TYPE:Sciatic nerve
F22AGE:24 week | DIET:HF STZ | SAMPLE_TYPE:Dorsal root ganglia
F23AGE:24 week | DIET:HF STZ | SAMPLE_TYPE:plasma
F24AGE:24 week | DIET:HF STZ | SAMPLE_TYPE:Sciatic nerve
Data matrix
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