Clustering data with heatmap algorithm for (Study ST001648)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment

The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1	Treatment:Root_Al-1
F2	Treatment:Root_Al-2
F3	Treatment:Root_Al-3
F4	Treatment:Root_Al-4
F5	Treatment:Root_Cd-1
F6	Treatment:Root_Cd-2
F7	Treatment:Root_Cd-3
F8	Treatment:Root_Cd-4
F9	Treatment:Root_Control-1
F10	Treatment:Root_Control-2
F11	Treatment:Root_Control-3
F12	Treatment:Root_Control-4
F13	Treatment:Root_Drought-1
F14	Treatment:Root_Drought-2
F15	Treatment:Root_Drought-3
F16	Treatment:Root_Drought-4
F17	Treatment:Root_K deficiency-1
F18	Treatment:Root_K deficiency-2
F19	Treatment:Root_K deficiency-3
F20	Treatment:Root_K deficiency-4
F21	Treatment:Root_N deficiency-1
F22	Treatment:Root_N deficiency-2
F23	Treatment:Root_N deficiency-3
F24	Treatment:Root_N deficiency-4
F25	Treatment:Root_P deficiency-1
F26	Treatment:Root_P deficiency-2
F27	Treatment:Root_P deficiency-3
F28	Treatment:Root_P deficiency-4
F29	Treatment:Root_Salt-1
F30	Treatment:Root_Salt-2
F31	Treatment:Root_Salt-3
F32	Treatment:Root_Salt-4
F33	Treatment:Shoot_Al-1
F34	Treatment:Shoot_Al-2
F35	Treatment:Shoot_Al-3
F36	Treatment:Shoot_Al-4
F37	Treatment:Shoot_Cd-1
F38	Treatment:Shoot_Cd-2
F39	Treatment:Shoot_Cd-3
F40	Treatment:Shoot_Cd-4
F41	Treatment:Shoot_Control-1
F42	Treatment:Shoot_Control-2
F43	Treatment:Shoot_Control-3
F44	Treatment:Shoot_Control-4
F45	Treatment:Shoot_Drought-1
F46	Treatment:Shoot_Drought-2
F47	Treatment:Shoot_Drought-3
F48	Treatment:Shoot_Drought-4
F49	Treatment:Shoot_K deficiency-1
F50	Treatment:Shoot_K deficiency-2
F51	Treatment:Shoot_K deficiency-3
F52	Treatment:Shoot_K deficiency-4
F53	Treatment:Shoot_N deficiency-1
F54	Treatment:Shoot_N deficiency-2
F55	Treatment:Shoot_N deficiency-3
F56	Treatment:Shoot_N deficiency-4
F57	Treatment:Shoot_P deficiency-1
F58	Treatment:Shoot_P deficiency-2
F59	Treatment:Shoot_P deficiency-3
F60	Treatment:Shoot_P deficiency-4
F61	Treatment:Shoot_Salt-1
F62	Treatment:Shoot_Salt-2
F63	Treatment:Shoot_Salt-3
F64	Treatment:Shoot_Salt-4

Data matrix