Data for Comprehensive analysis of transcriptome and metabolome in Intrahepatic Cholangiocarcinoma and Hepatocellular Carcinoma (Study ST000230)

(Analysis AN000344)

Values for each metabolite have been scaled by dividing by the mean across all factors

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MetaboliteF1F2F3F4
1,2,3,4,6,7,8,9-Octachlorodibenzofuran/ 0.3652 1.8198 0.5148 1.3001
16alpha-Bromo-17beta-estradiol(0)/ 0.2820 1.0486 1.1510 1.5184
?1-Methyl-2-pyrrolidone 0.8078 0.9631 1.4663 1.4132
1-Methyl-4-imidazoleacetic acid 0.7190 1.8502 0.6707 0.7601
1-Methyladenosine 0.9518 0.7825 1.6529 0.6128
1-Methylhistamine 0.8590 0.7924 1.7695 0.7181
1-Methylhistidine 0.9208 1.3700 1.0066 0.7026
1-Methylnicotinamide 0.5560 0.6617 1.6479 1.1344
1-Pyrroline 5-carboxylic acid 1.3973 0.5214 1.1219 NA
2-Aminoadipic acid 2.7170 0.5419 0.3736 0.3676
2-Aminobutyric acid 0.8041 1.1898 0.9304 1.0757
2-Methylserine 2.2347 0.8166 0.4165 0.4522
2-Phenylethylamine 0.5128 0.7338 1.3855 1.3170
3,4-Dehydrothiomorpholine-3-carboxylate/ 1.2324 1.0072 0.6794 1.0330
3-Aminoisobutyric acid 1.1849 1.1908 0.6561 0.9682
3-beta-D-Galactosyl-sn-glycerol/ Dyphylline/ 2-(beta-D-Glucosyl)-sn-glycerol/ 0.4798 0.9065 0.8137 1.7134
3-(Pyrazol-1-yl)-L-alanine/ 0.7709 1.3436 NA NA
4-Aminobenzoate/ 4-Nitrotoluene/ 0.5246 1.6531 0.7765 0.9714
4-(Trimethylammonio)but-2-enoate/ 0.7117 1.8978 0.4020 0.8888
5,6-Dihydrothymine/ gamma-Amino-gamma-cyanobutanoate/ alpha-Amino-gamma-cyanobutanoate/ 0.4192 1.9222 0.4298 1.0388
5-Aminovaleric acid 0.8180 1.7161 0.5646 0.7305
5-Hydroxylysine 0.7379 0.6152 1.9689 0.6780
5-Phosphonooxy-L-lysine/ 2-Deoxystreptamine phospahte/ 2-Deoxystreptamine 4-phosphate/ Phosphoallohydroxy-L-lysine/ 1.9953 0.1924 1.4846 0.1933
6alpha-Fluoro-11beta,17-dihydroxypregn-4-ene-3,20-dione/ 9-Fluoro-11beta,16alpha-dihydroxypregn-4-ene-3,20-dione/ 0.4692 1.5747 0.7125 1.2435
Acetylcysteine/ 0.9142 1.2281 0.8106 0.9427
Adenine 1.3942 1.3674 0.5665 0.6719
Adenosine 1.3654 1.0121 0.8560 0.7665
ADMA 1.2866 0.6297 1.5316 0.5522
Ala 0.7429 1.1514 0.9933 1.1124
Ala-Ala 0.8542 0.9301 1.0950 1.1208
Ala-Arg/Arg-Ala 0.7054 0.9819 1.1089 1.2038
Ala-Asn/Asn-Ala/Gly-Gln 0.9150 0.9840 1.0943 1.0381
Ala-Asp/Asp-Ala 0.6244 0.8325 1.5331 1.0100
Ala-Gly/Gly-Ala 0.7353 0.8944 1.2216 1.1488
Ala-His/His-Ala 0.6863 1.0592 0.8893 1.3651
Ala-Lys 0.5847 0.9681 1.1277 1.3196
Ala-Met 0.7898 0.8106 1.3617 1.0379
Ala-Ser/Thr-Gly 0.6791 0.8390 1.3376 1.1443
Ala-Thr/Thr-Ala 0.6963 1.0386 1.0237 1.2414
Ala-Tyr/Phe-Ser/Tyr-Ala 0.6517 0.9099 1.1823 1.2562
Ala-Val/Ile-Gly/Leu-Gly/Val-Ala 0.5309 0.8807 1.4059 1.1825
Anthranilic acid 0.3158 0.5994 2.0848 NA
Arg 0.9904 0.1229 2.6753 0.2115
Arg-Asn/Asn-Arg 0.8419 0.9509 1.3195 0.9410
Arg-Gln 0.7240 1.3090 0.8593 1.1357
Arg-Glu/Glu-Arg 0.7559 1.0142 1.1118 1.1182
Arg-Gly/Gly-Arg 0.6678 1.1305 0.8675 1.3342
Arg-Ile/Arg-Leu/Leu-Arg 0.4711 0.9309 1.1485 1.4495
Argininosuccinic acid 0.6066 0.7891 1.7163 0.8879
Arg-Ser/Ser-Arg 0.6456 0.9955 1.1107 1.2482
Arg-Thr 0.6290 1.0322 1.0354 1.3033
Arg-Tyr/Tyr-Arg 0.5915 0.9151 1.1059 1.3874
Arg-Val 0.5440 0.8645 1.4493 1.1196
Asn 0.8935 1.1269 1.1552 0.8245
Asn-Glu 0.5383 1.3133 0.9153 1.2853
Asn-Ile/Asn-Leu/Ile-Asn/Leu-Asn/Val-Gln 0.8937 0.7387 1.3297 1.0379
Asn-Lys/Lys-Asn 0.5958 1.1461 1.2012 1.1086
Asn-Ser/Ser-Asn 1.0371 0.9528 0.9698 1.0403
Asn-Thr/Ser-Gln/Thr-Asn 0.5770 1.1630 0.9279 1.3321
Asn-Val/Val-Asn 0.7858 0.8965 1.1053 1.2123
Asp 0.5006 0.9579 1.7393 0.8022
Asp-Lys 0.5654 0.9139 1.3273 1.1935
Asp-Ser/Ser-Asp 0.6746 0.8363 1.5147 0.9744
Atherospermidine/ 0.6607 1.8608 0.9151 0.4760
beta-Alanyl-L-lysine/ gamma-L-Glutamylputrescine/ 1.7635 0.6706 0.7525 0.6372
Betaine 0.9344 1.5988 0.5808 0.8860
Betaine aldehyde_+H2O 1.3507 1.9358 0.3863 0.3273
Betonicine 0.9978 0.9474 0.3936 1.4654
?-Butyrobetaine 1.3865 0.8967 1.0129 0.7038
Butyrylcarnitine/Isobutyrylcarnitine 1.1129 0.7533 1.1402 0.9935
Carnitine 1.2307 1.0093 0.6396 1.1204
Carnosine 0.2159 0.2847 2.5491 0.3198
Choline 0.7929 1.2410 0.9627 1.0034
cis-4-Hydroxyproline 0.8951 0.7084 1.3837 1.0129
Citrulline 1.1357 0.7422 1.1796 0.9426
Creatine 0.7815 1.1671 0.9837 1.0677
Creatinine 1.1485 1.0602 0.9812 0.8101
Cryptolepine/ 0.9334 0.9241 1.2318 0.9106
Cys 0.5696 0.5370 0.9804 1.9091
Cystathionine 1.1904 0.7907 1.1573 0.8616
Cysteine glutathione disulfide 1.8952 0.7226 0.5849 0.7973
Cystine 2.6115 0.4337 0.4546 0.5003
Cytidine 1.0162 0.6808 1.6596 0.6434
Cytosine 0.7086 0.9944 0.9578 2.0287
Dehydrocostus lactone/ Eremanthin/ Dehydromyodesmone/ 3-(1,2,3,4-Tetrahydro-6-hydroxy-2-naphthyl)cyclopentanone/ Curzerenone/ Furanodienone/ Linderenol/ Isodehydrocostus lactone/ 0.3787 1.4989 0.8064 1.3405
DIBOA-glucoside/ 0.3399 1.3478 0.4326 1.6597
Dicyclohexylamine/ 0.3524 0.3542 2.3984 0.8951
Ergothioneine 1.5959 0.7913 0.8370 0.6230
Ethanolamine 0.9259 1.3304 0.9122 0.8315
Fagomine/ 0.5491 2.1458 0.3471 0.6315
Fortimicin KL1/ 0.3922 1.1822 0.9548 1.4709
Fructoselysine/ 0.5580 1.2343 1.2849 0.9179
GABA 0.4460 1.3244 0.7687 1.4608
Gln 0.8938 1.1795 0.8179 1.1088
Gln-Thr/Thr-Gln 0.6756 0.9475 1.1781 1.1989
Glu 1.0658 0.9533 1.2463 0.7346
Gluconolactone 0.8790 0.9405 0.7814 1.3991
Glucosamine 0.3107 1.1698 0.4763 1.4367
?-Glu-Cys 0.1304 1.0703 0.7554 1.5711
Glu-Glu 0.6813 0.6886 1.6157 1.0144
Glu-Ile/Glu-Leu/Ile-Glu/Leu-Glu 0.6619 0.7129 1.4533 1.1720
Glu-Lys/Lys-Glu 0.4354 0.8207 1.5693 1.1746
Glu-Ser 0.7470 0.6577 1.5755 1.0197
Glutathione (GSH) 0.5574 0.8799 0.6081 1.9545
Glutathione (GSSG)_divalent 1.0988 1.3963 0.7525 0.7524
Glu-Tyr/Tyr-Glu 0.6212 0.8488 1.2847 1.2452
Gly 0.9238 1.0192 1.1543 0.9028
Gly-Asn 1.0697 0.9680 0.9606 0.9941
Glycerophosphocholine 0.7258 1.3410 0.5243 1.4088
Gly-Gly 0.9441 0.7440 1.4189 0.8929
Gly-His/His-Gly 0.5134 1.3374 0.9627 1.1865
Gly-Ile/Gly-Leu 1.1641 0.7001 1.3307 0.8052
Gly-Lys/Lys-Gly 0.6834 1.0861 1.2008 1.0297
Gly-Met/Met-Gly 0.7587 0.9714 1.1875 1.0777
Gly-Thr/Ser-Ala 0.5966 0.8486 1.4221 1.1327
Gly-Val 0.6465 0.6251 1.9181 0.8104
Guanidinosuccinic acid 0.1610 2.3388 0.2431 1.1310
Guanidoacetic acid 0.9957 0.6147 1.8252 0.5643
Guanine 1.0645 0.5822 1.9433 0.4099
Guanosine 1.4579 0.8080 1.2244 0.5097
His 0.8605 1.1952 0.8640 1.0803
Histamine 0.3103 0.8864 2.1311 0.6721
His-Thr/Thr-His 0.7739 1.0981 0.7513 1.3768
Homoserine 1.4828 0.8151 1.0046 0.5473
Homoserinelactone 1.7474 0.6058 0.6099 0.4196
Homospermidine/ Aminopropylcadaverine/ 0.3194 1.1842 0.3079 2.0750
Hordenine 0.2094 0.8442 0.9356 1.7352
Hydroxyproline 1.0790 0.5950 1.6171 0.7089
Hypotaurine 0.7127 0.6877 1.9920 0.6076
Hypoxanthine 0.8855 0.8172 1.7001 0.5972
Ile 0.9207 0.8944 1.4178 0.7671
Ile-Ala/Leu-Ala 0.5336 0.6272 1.7698 1.0694
Ile-Arg_divalent 0.6417 0.9466 1.1198 1.2918
Ile-Asp/Leu-Asp 0.4741 0.8119 1.4205 1.2935
Ile-Gln/Leu-Gln 0.6198 0.7787 1.4207 1.1808
Ile-Lys/Lys-Ile/Lys-Leu/Leu-Lys 0.5644 0.9033 1.0812 1.4511
Ile-Ser/Ser-Ile/Ser-Leu/Thr-Val/Val-Thr 0.6235 0.9190 1.1934 1.2641
Ile-Thr/Thr-Ile/Thr-Leu 0.5523 0.6409 1.6522 1.1546
Ile-Val 0.6022 1.0287 0.9858 1.3833
Imidazolelactic acid 1.1591 0.8356 1.0418 0.9557
Inosine 0.9484 1.1322 0.9072 1.0123
Isopropylamine/ 1.4333 0.7833 NA NA
Isovalerylcarnitine 1.1931 1.3159 0.2928 1.1596
Kynurenine 0.7253 0.6941 2.0031 0.5776
Leu 0.8571 0.9719 1.3086 0.8623
Leu-His 0.6343 0.9304 1.0403 1.3950
Leu-Ile/Leu-Leu 0.4930 0.7110 1.3001 1.4960
Leu-Phe 0.4367 0.9073 0.9042 1.7518
Lidocaine 0.5567 1.1653 1.2923 1.0413
L-Norleucine/ 6-Aminohexanoate/ -beta-Leucine/ beta-Alaninebetaine/ N,N-Diethylglycine/ 0.6096 2.0797 0.3653 0.7914
Lys 0.8497 1.0385 1.2348 0.8770
Lys-Ala 0.6150 1.1029 0.9568 1.3253
Lys-Gln 0.8106 0.9641 1.0700 1.1553
Lys-Phe/Phe-Lys 0.4066 0.8939 1.1008 1.5986
Lys-Ser/Ser-Lys 0.5713 1.1603 0.9111 1.3573
Lys-Tyr/Tyr-Lys 0.6945 0.7500 1.4470 1.1086
Lys-Val 0.4578 0.9252 1.1242 1.4928
Maculosin/ 0.2390 0.7570 1.2766 1.7050
Malonylcarnitine 1.3490 0.8615 0.7367 1.1397
Melicopine/ 0.4469 0.9982 1.4874 1.0675
Met 0.7811 0.8238 1.7157 0.6794
Met-Gln 0.6209 1.2036 0.9115 1.2980
Methaphenilene/ 0.5046 1.7397 0.2983 0.7462
Methionine sulfoxide 0.9437 1.2407 1.2267 0.5890
Methyldopa anhydrous/ Enicoflavine/ 0.5423 0.5795 1.6335 1.2181
Metronidazole 0.8638 1.0549 1.1011 1.0342
Met-Thr 1.1897 0.7659 0.9234 1.0692
N1-Methyl-4-pyridone-5-carboxamide 0.4677 1.8374 0.6554 0.8606
N5-Ethylglutamine 0.8326 1.0153 1.4567 0.6951
N6-Acetyllysine 0.6084 0.7177 1.9192 0.7056
N6-Methyllysine 0.8410 0.7807 1.1938 1.1846
N8-Acetylspermidine 0.8270 0.5606 1.7489 0.8636
N-Acetyl-D-fucosamine/ N-Acetyl-D-quinovosamine/ 0.2593 1.5687 0.7166 0.9433
N-Acetylgalactosamine 0.6736 0.8909 1.0213 1.4141
N-Acetylhistidine 1.5653 0.7788 0.8358 0.9805
N-Acetyl-L-citrulline/ 0.8077 1.0678 1.0070 1.1300
Nagilactone C/ Vernolide/ Gibberellin A8-catabolite/ 0.6858 1.5749 0.4359 1.0256
N-Ethylglycine 0.6822 0.7815 0.4919 1.6563
Neuraminic acid/ Miserotoxin/ 1.0983 0.6524 1.7302 0.5191
Nicotinamide 0.6572 1.5030 0.7733 1.0664
N-Methylethanolamine phosphate/ D-1-Aminopropan-2-ol O-phosphate/ L-1-Aminopropan-2-ol O-phosphate/ 0.4312 1.0696 0.9178 1.8369
NMN 1.0934 1.2999 0.5178 1.0086
N,N-Dimethylglycine 0.6282 1.6616 0.4336 1.2766
Noradrenaline NA 0.6633 0.3009 1.4765
Norfloxacin/ 1.0429 1.5782 0.4506 1.0246
O-Acetylcarnitine 0.6828 0.7817 1.6260 0.9095
Octanoylcarnitine 0.7298 1.0015 1.2584 0.9487
Ophthalmic acid 1.2590 1.0722 0.3959 1.2728
Ornithine 0.6566 1.2476 1.0397 1.0561
Oxotremorine/ Isoproturon/ Monoethylglycinexylidide/ 0.4010 0.9467 1.0632 1.3601
Pantetheine 4^-phosphate/ 0.4595 1.6511 0.5582 1.3312
Phe 0.8590 1.0142 1.2714 0.8554
Phe-Arg_divalent 0.5297 1.1411 0.7134 1.6158
Phe-Asn 0.8126 0.6085 1.6682 0.9108
Phe-Gln 0.8329 1.1197 0.8846 1.1628
Phe-Thr 0.3243 1.1834 0.7527 1.7397
Phe-Val 0.5424 0.7289 1.4638 1.2649
Phosphorylcholine 1.8824 0.6188 0.8828 0.6160
Pipecolic acid 0.5797 1.0574 0.8989 1.4471
Prenyl-L-cysteine/ 0.8521 1.2473 0.9996 0.7691
Pro 0.7338 0.7050 1.5062 1.0550
Pro-Ala 0.1292 0.2630 1.5278 1.9349
Pro-Arg_divalent 0.5023 0.9323 1.4208 1.1446
Pro-Ser 0.5835 1.2982 1.0382 1.2189
Pro-Val 0.5619 1.2152 1.0474 1.1755
Putrescine 1.0009 1.1259 0.7891 1.0840
Pyridoxamine 5^-phosphate 0.3684 1.5104 0.4080 1.7133
(R)-1-Aminopropan-2-ol/ 1-Aminopropan-2-ol/ 0.3802 1.1146 1.0785 1.4397
Ranitidine NA NA 1.0000 NA
RU-0211/ 6alpha-Fluoro-17-hydroxypregn-4-ene-3,20-dione acetate/ 0.5391 1.7252 0.4427 1.2929
Saccharopine 0.4696 1.6603 1.1145 0.7556
S-Adenosylhomocysteine 0.9873 1.0766 0.8905 1.0456
S-Adenosylmethionine 2.4441 0.5201 0.6041 0.4317
S-Allyl-L-cysteine/ 0.7138 1.8177 0.4316 0.7597
Sarcosine 0.7655 1.1754 0.6857 1.3734
SDMA 0.8908 1.4180 0.6707 1.0205
Ser 1.1041 0.9507 1.0238 0.9213
Ser-Gly/Gly-Ser 0.7785 1.0013 1.0496 1.1705
Ser-His 0.5827 0.9672 1.0311 1.4190
Ser-Ser 0.8060 0.8443 1.2464 1.1033
Ser-Thr 0.7465 0.8907 1.1658 1.1970
S-Methylglutathione 0.2895 1.5268 0.3430 1.8407
Spermidine 0.6677 0.8062 1.1973 1.3288
Spermine 0.3588 0.5275 1.6811 1.6596
ß-Ala 0.7087 1.3644 0.6471 1.2798
Stachydrine 1.3818 1.1856 0.5728 0.8598
Taurine 0.6800 0.3949 2.4990 0.4261
Thiamine 0.3056 1.3524 0.5763 1.6245
Thiaproline 0.8264 1.0281 1.1689 0.9766
Thiomorpholine 3-carboxylate/ 0.7363 1.0386 1.1195 1.1457
Thr 0.8169 0.8586 1.3621 0.9624
Thr-Asp/Asp-Thr/Ser-Glu 0.7507 0.9863 1.2512 1.0096
Thr-Glu 0.7357 0.8085 1.4108 1.0450
Thr-Lys 0.7172 1.0026 1.1696 1.1106
Thr-Thr 0.9889 0.7042 1.3319 0.9751
Thr-Tyr/Tyr-Thr 0.4248 0.8914 0.9537 1.7301
Thymine 0.4467 1.1506 0.4913 1.9114
trans-Glutaconic acid 1.1991 0.9754 0.6347 NA
Trigonelline 0.3934 1.5228 0.7053 1.2803
Trimethylamine 1.9177 0.5784 0.4312 0.5029
Trimethylamine N-oxide 1.4370 1.2152 0.9276 0.4202
Trp 1.0316 0.9560 1.2465 0.7659
Tyr 0.9107 0.9649 1.3988 0.7256
Tyramine 0.2747 0.6713 1.3248 1.3792
Tyr-Arg_divalent 0.3707 1.2421 0.8076 1.5796
Tyr-Gln 0.5641 0.9261 1.1772 1.3326
Tyr-Gly 0.6733 0.8271 1.4286 1.0711
Tyr-His 0.4507 1.3171 0.6817 1.5505
Uracil 0.8827 0.9663 1.3083 0.8428
Urea 1.0447 1.0761 1.0502 0.8291
Urethane/ 2-Nitropropane/ HMMF/ 0.7663 1.1114 1.0379 1.0844
Uridine 0.7039 1.5434 0.4945 1.2583
Urocanic acid 0.3557 0.8294 2.0499 0.7650
Val 0.9004 0.9802 1.2945 0.8250
Val-Arg_divalent 0.6711 0.8307 1.3631 1.1351
Val-Asp 0.9482 0.7778 1.1851 1.0890
Val-Glu 0.7517 0.7822 1.5510 0.9151
Val-Gly/N-Acetylornithine 0.6441 1.0997 1.0151 1.2411
Val-His 0.6968 0.9519 1.1065 1.2449
Val-Lys 0.6464 1.1402 0.9561 1.2573
Vulgaxanthin-II/ Psorospermin/ S-[2-(N7-Guanyl)ethyl]-N-acetyl-L-cysteine/ Methylophiopogonone A/ 0.5539 0.8090 0.7914 1.8110
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Factors:

F1Tissue Type:HCC (Hepatocellular carcinoma)
F2Tissue Type:HCC-NT (surrounded non tumor of HCC)
F3Tissue Type:ICC (Intrahepatic cholangiocarcinoma)
F4Tissue Type:ICC-NT (surrounded non tumor of ICC)
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