Data for GC/MS and LC/MS metabolomics profiling for breast cancer plasma data and control plasma data (Study ST000355)
(Analysis AN000581)Values for each metabolite have been scaled by dividing by the mean across all factors Run Hierarchial cluster analysis on this study | Run Heatmap cluster analysis on this studyMetabolite | F1 | F2 | F3 | F4 | F5 |
---|---|---|---|---|---|
18-Hydroxycorticosterone | 0.9522 | 0.9759 | 0.9925 | 1.3747 | 0.9187 |
1-Pyrroline-2-carboxylic acid | 1.0351 | 0.9784 | 0.9949 | 1.0167 | 1.0032 |
2,3-Diaminopropionic acid | 0.9279 | 1.0598 | 1.0238 | 1.0655 | 0.9449 |
2-Hydroxycinnamic acid | 0.9342 | 1.0102 | 0.9940 | 1.0697 | 0.9925 |
3-Hydroxydodecanedioic acid | 1.2489 | 1.0962 | 0.6512 | 0.8640 | 1.1326 |
3-Indolepropionic acid | 0.8305 | 1.2864 | 1.9260 | 0.6249 | 0.3905 |
3-Pyridylacetic acid | 2.1378 | 0.8518 | 0.7668 | 0.9324 | 0.9758 |
3-Succinoylpyridine | 1.3515 | 0.9605 | 1.5167 | 0.7523 | 0.6930 |
4,8 dimethylnonanoyl carnitine | 1.3054 | 1.0981 | 1.0001 | 1.0444 | 0.8469 |
4-Aminohippuric acid | 1.2384 | 0.9316 | 1.0474 | 0.9403 | 0.9715 |
4-Hydroxy-2-oxoglutaric acid | 1.1031 | 0.9667 | 0.9644 | 0.8681 | 1.0576 |
4-hydroxy-proline | 1.0025 | 0.9989 | 0.9863 | 0.9972 | 1.0094 |
5-Acetylamino-6-formylamino-3-methyluracil | 0.9948 | 0.8922 | 0.9823 | 0.8208 | 1.1359 |
5-Hydroxyindoleacetic acid | 1.0452 | 1.0020 | 0.9872 | 0.9655 | 1.0058 |
5-Hydroxylysine | 0.9952 | 1.0304 | 1.0333 | 1.0004 | 0.9608 |
5-Methoxytryptophol | 1.0361 | 1.1473 | 0.8041 | 0.8778 | 1.0541 |
5-Phosphoribosylamine | 1.1872 | 0.8906 | 0.9959 | 0.9124 | 1.0541 |
6-Dehydrotestosterone glucuronide | 2.3417 | 0.9158 | 0.7630 | 0.7580 | 0.9052 |
6-Phosphogluconic acid | 1.1527 | 0.9758 | 0.9571 | 0.8588 | 1.0467 |
Acetylcarnitine | 0.8554 | 0.8877 | 0.9262 | 0.8808 | 1.1902 |
Aminoacetone | 1.0082 | 0.9425 | 0.8900 | 0.8775 | 1.1402 |
Androstenedione | 1.3573 | 0.8798 | 0.8685 | 1.4986 | 0.9186 |
Arginine | 1.0461 | 1.0548 | 1.0225 | 1.1430 | 0.8960 |
Benzaldehyde | 0.9283 | 1.0421 | 1.0355 | 0.9259 | 0.9912 |
Benzocaine | 0.9128 | 1.0501 | 1.0344 | 0.9184 | 0.9929 |
beta-D-Glucopyranuronic acid | 0.9164 | 0.9700 | 0.9346 | 1.0554 | 1.0639 |
Bilirubin | 1.5871 | 0.9996 | 0.9394 | 1.4867 | 0.7437 |
Bisnorcholic acid | 1.1001 | 1.0555 | 0.9770 | 1.4505 | 0.8170 |
Butyrylcarnitine | 1.0330 | 1.0489 | 1.3837 | 1.2323 | 0.6706 |
Calcidiol | 1.0363 | 1.0476 | 0.9484 | 1.2165 | 0.9267 |
Carnitine | 0.8514 | 0.9505 | 0.9542 | 0.8728 | 1.1359 |
Carnosine | 1.0712 | 1.0507 | 1.1019 | 0.9488 | 0.9020 |
Choline | 1.0529 | 0.9081 | 0.7957 | 1.1144 | 1.1378 |
cis-2-Methylaconitate | 1.0098 | 0.9845 | 0.9986 | 0.9408 | 1.0263 |
Citrulline | 0.9944 | 1.0026 | 0.9995 | 1.0075 | 0.9977 |
Cystathionine | 0.8956 | 1.2833 | 1.2544 | 0.9067 | 0.7144 |
Decanoylcarnitine | 1.5171 | 1.1557 | 1.0056 | 1.0934 | 0.7386 |
Dehydroascorbic acid | 1.1523 | 0.9851 | 1.0667 | 1.0098 | 0.9273 |
Delta-hydroxylysine | 1.0518 | 0.9049 | 0.7908 | 1.1198 | 1.1415 |
Deoxycholic acid | 1.0149 | 0.9945 | 0.9661 | 1.0079 | 1.0184 |
Dihydroxyacetone phosphate | 1.0241 | 1.0038 | 1.0022 | 1.0087 | 0.9875 |
Dodecanoylcarnitine | 1.2752 | 1.1002 | 0.9102 | 1.0574 | 0.9047 |
Epinephrine | 1.0567 | 0.7094 | 1.1071 | 1.8203 | 0.8587 |
Epinephrine glucuronide | 0.8499 | 0.9193 | 0.9183 | 0.9147 | 1.1639 |
Glucose 6-phosphate | 0.7346 | 1.1280 | 1.3381 | 0.6532 | 0.8797 |
Glutamine | 1.2968 | 1.1045 | 1.1982 | 1.1065 | 0.7036 |
Glyceraldehyde 3-phosphate | 0.9789 | 0.9986 | 0.9628 | 1.0065 | 1.0272 |
Glycerophosphocholine | 0.6574 | 0.6463 | 0.5288 | 0.6874 | 1.6997 |
Glycerylphosphorylethanolamine | 1.2541 | 0.9529 | 1.1021 | 0.9759 | 0.9110 |
Glycolaldehyde | 1.1111 | 1.0370 | 0.9834 | 1.1391 | 0.9165 |
Glycylprolylhydroxyproline | 0.7497 | 0.9330 | 1.0410 | 1.5425 | 0.9150 |
Guanidineacetic acid | 1.0740 | 1.0073 | 0.9945 | 0.9861 | 0.9844 |
Guanine | 0.8844 | 1.0504 | 1.0035 | 0.9937 | 0.9962 |
Hexanoylcarnitine | 1.3201 | 0.9967 | 1.0310 | 1.2043 | 0.8411 |
Hexanoylglycine | 0.9100 | 1.1207 | 0.7553 | 1.1623 | 1.0469 |
Homoanserine | 0.9106 | 1.6433 | 0.5857 | 0.5571 | 1.0111 |
Homocysteic acid | 0.9821 | 1.0023 | 1.0136 | 1.0452 | 0.9809 |
Hordenine | 1.0889 | 0.9705 | 0.9988 | 0.9563 | 1.0108 |
Hydroxyacetic acid | 1.3890 | 1.0716 | 1.2046 | 0.9103 | 0.7572 |
Hypoxanthine | 0.7562 | 0.7465 | 0.8795 | 1.1504 | 1.2534 |
Indoleacrylic acid | 0.9723 | 1.0639 | 1.0100 | 0.9599 | 0.9717 |
Isopentenyl pyrophosphate | 1.0371 | 0.9877 | 0.9737 | 1.0210 | 1.0086 |
Isovalerylcarnitine | 1.0013 | 1.0546 | 0.8412 | 0.7066 | 1.1515 |
Linoelaidic acid | 0.4448 | 1.0605 | 1.4037 | 0.5554 | 0.9846 |
Linoleyl carnitine | 1.1863 | 1.0735 | 0.8550 | 1.5387 | 0.8326 |
L-phenylalanyl-L-proline | 0.9549 | 0.9947 | 0.9716 | 0.9493 | 1.0476 |
Lysine | 1.3686 | 1.0937 | 1.1411 | 1.1403 | 0.7177 |
Methionine | 1.0292 | 0.9894 | 0.9868 | 1.0173 | 1.0024 |
Methylguanidine | 0.9351 | 1.0651 | 1.0280 | 1.0556 | 0.9402 |
N6-Acetyl-L-lysine | 1.2941 | 1.0818 | 0.7926 | 0.9605 | 1.0140 |
N-acetyl-glutamine | 0.8660 | 0.9009 | 0.8088 | 1.0855 | 1.1898 |
Nicotinuric acid | 0.7802 | 0.8622 | 0.8454 | 0.9734 | 1.2474 |
Norleucine | 1.1606 | 0.8925 | 0.9898 | 1.2000 | 0.9750 |
Octanoylcarnitine | 1.3705 | 1.0455 | 1.0483 | 1.0250 | 0.8406 |
oleoylcarnitine | 1.2166 | 1.0740 | 0.8987 | 1.3439 | 0.8567 |
o-Tyrosine | 0.9374 | 1.0177 | 0.9871 | 1.0731 | 0.9901 |
Oxaloacetate | 1.1050 | 0.9441 | 0.9710 | 0.9311 | 1.0486 |
Palmitoylcarnitine | 0.7381 | 1.0250 | 1.4750 | 0.8328 | 0.8062 |
Pentosidine | 0.3102 | 0.0743 | 0.2566 | 0.0682 | 2.1695 |
Phenylglyoxylic acid | 1.0515 | 1.0175 | 0.9916 | 0.9557 | 0.9945 |
Phenyllactic acid | 0.1359 | 0.0960 | 0.2586 | 0.1033 | 2.4937 |
Phosphoserine | 1.0276 | 0.9984 | 0.9887 | 0.9888 | 1.0045 |
Progesterone | 1.3753 | 1.1051 | 0.9811 | 1.0817 | 0.8254 |
Proline betaine | 0.9809 | 1.3231 | 1.2533 | 0.8186 | 0.6947 |
Propionylcarnitine | 0.9627 | 1.0467 | 1.1324 | 1.2465 | 0.8228 |
Quinic acid | 1.1222 | 0.8295 | 0.9254 | 1.0448 | 1.1110 |
Sphingosine | 0.9833 | 1.0262 | 0.9559 | 1.0006 | 1.0144 |
Sphingosine 1-phosphate | 1.1155 | 1.0597 | 0.9724 | 1.4558 | 0.8118 |
Stearoylcarnitine | 1.2816 | 1.0881 | 0.9022 | 1.1968 | 0.8737 |
Succinyladenosine | 0.8590 | 1.1203 | 1.1502 | 0.9338 | 0.8848 |
Tetracosahexaenoic acid | 1.1231 | 1.0350 | 1.0041 | 1.1880 | 0.8872 |
Tetradecanoylcarnitine | 1.1959 | 1.0292 | 0.9561 | 1.2086 | 0.8962 |
Thiamine | 1.2395 | 0.9026 | 1.0823 | 1.4099 | 0.8280 |
Tiglylglycine | 0.8021 | 1.0939 | 0.7032 | 1.2292 | 1.1031 |
trans-Hexadec-2-enoyl carnitine | 1.3252 | 1.0168 | 0.8554 | 1.1615 | 0.9484 |
Trimethylamine N-oxide | 1.2115 | 0.9913 | 0.9761 | 1.2614 | 0.8884 |
Undecanoic acid | 0.8226 | 0.6214 | 0.6236 | 1.5345 | 1.3643 |
Uracil | 1.1771 | 0.9918 | 1.0802 | 1.0242 | 0.9041 |
Valine | 1.0261 | 0.9923 | 1.0382 | 1.0144 | 0.9704 |
Factors:
F1 | Diagnosis:Breast cancer | Stage:1 |
F2 | Diagnosis:Breast cancer | Stage:2 |
F3 | Diagnosis:Breast cancer | Stage:3 |
F4 | Diagnosis:Breast cancer | Stage:4 |
F5 | Diagnosis:Control | Stage:- |