Data for A library of human gut bacterial isolates paired with longitudinal multiomics data enables mechanistic microbiome research (Study ST001192)

(Analysis AN001984)

Values for each metabolite have been scaled by dividing by the mean across all factors

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MetaboliteF1F2F3
1,2,4-trimethylbenzene 1.0103 0.9868 1.0177
1-methyladenosine 0.9755 0.9874 1.0915
1-methylguanosine/2-O-methylguanosine 1.0040 1.0261 0.9120
1-methylhistamine 0.7618 1.2169 0.8458
1-methylnicotinamide 0.8218 0.9516 1.5341
2-deoxyadenosine 0.7479 1.3276 0.5821
2-deoxycytidine 0.9510 1.0897 0.8343
2^-O-methyladenosine/3^-O-methyladenosine 0.5888 1.1481 1.3429
3-dehydroxycarnitine 1.0417 0.7857 1.5595
3-hydroxyanthranilic acid 1.0257 1.0053 0.9299
3-methoxytyramine 1.4448 0.8294 0.5514
3-methylhistidine 0.6791 1.1161 1.3449
4-guanidinobutanoic acid 1.3779 0.8027 0.7776
5-aminolevulinic acid 1.3479 0.8363 0.6815
5-HIAA 1.0266 1.0834 0.6891
5-hydroxytryptophan 1.1220 0.9138 0.9936
5-methylcytidine 0.4231 1.4811 0.8144
5-methylcytosine 1.2442 0.9411 0.6484
6,8-dihydroxypurine 0.9778 1.0241 0.9753
acetaminophen 1.8711 0.4884 0.6603
acetylcholine 0.6146 1.1110 1.5003
adenosine 1.2289 0.7688 1.2043
ADMA 1.0260 0.9595 1.0664
adrenochrome 1.1043 0.9694 0.8663
alanine 1.0453 0.9421 1.0773
alanyalanine 1.0031 0.9683 1.0895
alpha-glycerophosphocholine 1.3788 0.8230 0.7080
anserine 1.2763 0.7880 1.0809
anthranilic acid 1.1097 1.0094 0.7278
arginine 0.8643 1.1399 0.8702
asparagine 0.9886 0.9563 1.1604
aspartate 1.1164 0.9177 0.9969
atenolol 1.3731 0.7028 1.0606
beta-alanine 1.1889 0.9618 0.7055
beta-guanidinopropionic acid 1.2587 0.9584 0.4437
betaine 0.9824 1.0303 0.9464
bilirubin 0.8834 1.1782 0.7125
C10:2 carnitine 0.8850 0.8939 1.9726
C14 carnitine 0.8107 1.2097 0.7596
C16:0 SM 1.0155 0.9639 1.0798
C16 carnitine 1.0754 1.1267 0.4263
C18:0 LPC 0.9365 0.9444 1.3241
C18:1 carnitine 1.0161 1.0371 0.8352
C18:1-OH carnitine 1.3549 0.8511 0.4953
C18:2 carnitine 0.8220 1.2401 0.7497
C18 carnitine 1.0507 1.0464 0.7305
C20:4 carnitine 1.1266 0.9062 1.0173
C20 carnitine 1.2117 0.8313 1.0573
C26 carnitine 0.9958 0.9429 1.1943
C2 carnitine 1.4571 0.9620 0.1222
C3 carnitine 1.2495 0.7439 1.2352
C3-DC-CH3 carnitine 1.2125 1.0415 0.4301
C4 carnitine 1.0592 1.1787 0.3293
C4-OH carnitine 1.3741 0.9231 0.4595
C5:1 carnitine 1.2994 0.7307 1.1667
C5 carnitine 1.3130 0.8697 0.7154
C5-DC carnitine 1.2156 0.7814 1.1949
C6 carnitine 0.8548 1.0761 1.0845
C9 carnitine 1.6087 0.6045 0.9794
cadaverine 1.1086 1.1559 0.2909
carnitine 1.3575 0.9768 0.2937
carnosine 0.8848 1.0096 1.3228
cellobiose 0.9352 1.1389 0.7292
cerulenin 0.5900 1.1825 1.2807
choline 1.1664 0.8837 0.9915
citrulline 1.2039 0.8295 1.0746
cortexolone/2,1-deoxycortisol 1.2201 0.9801 0.5822
cortisol 1.1159 1.0007 0.7454
cortisone 1.2843 0.9937 0.4492
cotinine 0.4100 1.6917 0.2783
creatine 1.1627 0.7498 1.3971
creatinine 1.1316 0.8952 1.0322
cyclohexylamine 1.0205 0.9945 0.9722
cytidine 1.0491 1.0259 0.8148
cytosine 0.9539 1.0972 0.8054
dimethylglycine 0.8167 1.2368 0.7124
DMGV 0.8773 0.8802 1.5192
DOPA 0.9364 1.0578 0.9738
ectoine 0.9702 1.1596 0.5805
GABA/alpha-aminoisobutyric acid 1.3840 0.7167 1.0254
glutamate 0.9978 0.9620 1.1201
glutamine 0.9437 0.9727 1.2050
glycerol 0.9525 1.0324 1.0047
glycine 1.0581 0.9476 1.0327
guanidoacetic acid 1.6089 0.7077 0.8005
guanine 1.0793 1.0166 0.7772
guanosine 0.8798 1.1087 0.9311
histamine 0.8075 0.8720 1.8066
histidine 0.9034 1.0118 1.1741
histidinol 1.4029 0.8753 0.5031
homoserine 1.1032 0.8934 1.0993
hydroxyproline 1.0756 0.9830 0.8868
hypoxanthine 0.9996 0.9363 1.1941
imidazoleacetic acid 1.1723 0.9196 0.8697
isoleucine 1.0194 0.9494 1.1116
kynurenic acid 1.0713 0.9965 0.8558
leucine 0.9613 0.9362 1.2775
lysine 1.0641 0.9206 1.1017
m-coumaric acid 1.0646 0.9133 1.1198
metanephrine 1.0239 0.9211 1.1820
methionine 1.1099 0.9096 1.0356
methionine sulfoxide 1.0432 0.7850 1.5379
methylthioadenosine 1.0452 0.8744 1.2830
mevalonic acid 0.8277 1.1181 1.0158
N1-acetylspermidine 1.1680 0.8863 0.9801
N1-acetylspermine 0.8953 0.8760 1.5996
N6-acetyllysine 1.1049 0.9841 0.8204
N-a-acetyarginine 1.0495 1.0462 0.7525
N-acetylglutamine 1.1095 0.9253 0.9889
N-acetylleucine 1.0395 1.0067 0.8938
N-acetylornithine 0.9825 0.9788 1.1025
N-acetylputrescine 1.6902 0.6368 0.6029
N-acetyltryptophan 1.0937 0.8369 1.2914
N-acetyphenylalanine 1.0420 0.9079 1.1882
N-carbamoyl-beta-alanine 0.8251 1.2104 0.7415
niacinamide 1.0696 0.9500 1.0006
nicotinate 1.0618 0.9497 1.0182
NMMA 1.1985 0.8913 0.8986
nor-psi-tropine 1.0669 1.1314 0.4559
ornithine 0.8376 1.0035 1.3421
phenylalanine 0.8840 0.8464 1.7181
phenylalanine-d8 1.0254 0.9736 1.0250
phosphocholine 1.0245 0.8671 1.3530
phytosphingosine 1.2405 0.8192 1.0260
pipecolic acid 1.0719 0.9756 0.9178
proline 1.0711 0.9007 1.1470
proline betaine 0.8988 1.1787 0.6775
pseudouridine 0.9420 1.0734 0.9030
pterin 1.0808 0.9269 1.0464
putrescine 1.1840 0.9234 0.8327
pyridoxamine 1.0275 0.9652 1.0459
pyroglutamic acid 0.9726 0.9634 1.1705
quercetin 1.9803 0.5222 0.1575
s-adenosylmethionine 1.0594 0.9404 1.0478
sarcosine 0.8955 1.1615 0.7372
SDMA 1.3161 0.7833 0.9707
serine 1.0153 0.9553 1.1023
serotonin 1.1155 0.9448 0.9166
spermidine 0.9486 1.0176 1.0591
sphinganine 1.0238 0.9733 1.0292
taurine 1.2648 0.6229 1.5689
thiamine 0.8658 1.0051 1.2760
threonine 1.0986 0.8987 1.0933
thymidine 1.0494 1.0041 0.8802
trimethylamine-N-oxide 2.2512 0.3144 0.3622
tryptophan 0.9972 0.9890 1.0394
tyramine 1.0317 1.0365 0.8203
tyrosine 0.9640 0.8794 1.4442
urocanic acid 1.4113 0.7713 0.8005
valine 1.3192 0.9104 0.5784
valine-d8 1.0114 0.9926 0.9976
xanthine 0.9980 0.9949 1.0199
xanthosine 0.9464 1.0491 0.9675
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Factors:

F1Diet:-
F2Diet:Omnivore
F3Diet:Vegetarian
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