Data for Dual RNA regulator VcdRP in V. cholerae modulates central metabolism (Study ST001752)
(Analysis AN002855)Values for each metabolite have been scaled by dividing by the mean across all factors Run Hierarchial cluster analysis on this study | Run Heatmap cluster analysis on this studyMetabolite | F1 | F2 | F3 | F4 | F5 | F6 | F7 | F8 | F9 | F10 | F11 | F12 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
acetyl coenzyme A | 0.4120 | 0.8311 | 1.0141 | 1.1478 | 0.5528 | 0.0825 | 2.6327 | 3.7821 | 0.1667 | 0.7548 | 0.3410 | 0.0537 |
alanine | 1.1214 | 0.9649 | 0.9559 | 1.0460 | 0.9593 | 0.7226 | 0.9278 | 0.8861 | 1.2329 | 1.2081 | 1.1721 | 0.8028 |
alpha ketoglutaric acid | 1.8258 | 0.4587 | 0.6579 | 1.1052 | 0.6401 | 1.2562 | 0.4412 | 0.5635 | 0.7964 | 2.4930 | 0.8018 | 0.8653 |
asparagine | 1.9595 | 1.2546 | 0.8111 | 2.0891 | 0.4367 | 0.9392 | 0.8109 | 0.6970 | 0.7108 | 0.6797 | 0.7343 | 0.8158 |
aspartic acid | 1.6179 | 0.9874 | 0.9901 | 1.5171 | 0.2499 | 0.8735 | 0.8973 | 0.7210 | 1.0073 | 0.8896 | 0.8180 | 1.4309 |
cis-aconitic acid | 1.2962 | 0.8205 | 0.9527 | 1.3550 | 1.0562 | 0.6079 | 0.3366 | 0.1915 | 1.6843 | 0.6533 | 1.4515 | 1.8914 |
citric acid | 2.6079 | 1.6018 | 1.5977 | 2.7136 | 1.6526 | 1.2558 | 0.0508 | 0.0549 | 0.1403 | 0.1307 | 0.1033 | 0.0907 |
fructose 1,6-bisphosphate | 0.7128 | 0.9859 | 1.2178 | 2.4083 | 1.4858 | 0.4282 | 0.5225 | 0.8829 | 0.7713 | 0.9875 | 1.0233 | 1.0646 |
fructose 6-phosphate | 1.1710 | 0.8391 | 0.7838 | 1.1576 | 0.8341 | 0.8339 | 0.6404 | 0.7620 | 1.0562 | 1.2373 | 1.6455 | 1.0587 |
glucose | 0.8571 | 0.6989 | 0.7107 | 0.8271 | 0.8060 | 0.5372 | 1.5209 | 1.3622 | 1.1702 | 1.0726 | 1.2345 | 1.3040 |
glucose 6-phosphate | 0.5427 | 0.2778 | 0.3890 | 0.5083 | 1.5596 | 0.4010 | 0.9130 | 1.1369 | 1.6165 | 1.7554 | 1.9574 | 0.9424 |
glutamic acid | 1.8362 | 1.3870 | 1.3399 | 1.6675 | 1.4497 | 1.0717 | 0.2278 | 0.1862 | 0.3515 | 1.5498 | 0.3621 | 0.5707 |
glutamine | 0.3154 | 0.3608 | 0.4535 | 0.4327 | 0.6261 | 0.3005 | 1.7693 | 1.3875 | 1.6841 | 1.4654 | 1.4666 | 2.1073 |
lactic acid | 2.2901 | 1.8767 | 1.8547 | 2.1502 | 1.8516 | 1.4747 | 0.0534 | 0.0645 | 0.0997 | 0.0851 | 0.0894 | 0.1097 |
malic acid | 2.5174 | 2.3187 | 1.7569 | 2.2068 | 0.9143 | 1.5404 | 0.1152 | 0.1450 | 0.1343 | 0.1730 | 0.1202 | 0.0579 |
phosphoenolpyruvic acid | 0.0383 | 0.0586 | 0.0677 | 0.0412 | 0.1027 | 0.0202 | 1.7258 | 2.2405 | 1.8680 | 1.9141 | 1.9484 | 2.4618 |
pyruvic acid | 3.6780 | 0.5167 | 2.4811 | 0.9009 | 0.1195 | 1.0464 | 0.4103 | 0.4110 | 0.6730 | 0.7088 | 0.5175 | 0.5367 |
succinic acid | 1.8715 | 1.3437 | 1.4153 | 1.9207 | 1.3820 | 1.1693 | 0.1090 | 0.1321 | 0.5496 | 0.5958 | 0.7956 | 0.5732 |
Factors:
F1 | Condition:OD0.5 | Strain:delta_GltA_pCtrl |
F2 | Condition:OD0.5 | Strain:delta_GltA_pVcdP |
F3 | Condition:OD0.5 | Strain:delta_VcdR_pCtrl |
F4 | Condition:OD0.5 | Strain:delta_VcdR_pVcdP |
F5 | Condition:OD0.5 | Strain:delta_VcdR_pVcdR |
F6 | Condition:OD0.5 | Strain:WT_pCtrl |
F7 | Condition:Overnight | Strain:delta_GltA_pCtrl |
F8 | Condition:Overnight | Strain:delta_GltA_pVcdP |
F9 | Condition:Overnight | Strain:delta_VcdR_pCtrl |
F10 | Condition:Overnight | Strain:delta_VcdR_pVcdP |
F11 | Condition:Overnight | Strain:delta_VcdR_pVcdR |
F12 | Condition:Overnight | Strain:WT_pCtrl |