#METABOLOMICS WORKBENCH sean_harshman_20181008_114153_mwtab.txt DATATRACK_ID:1534 STUDY_ID:ST001072 ANALYSIS_ID:AN001754 PROJECT_ID:PR000715
VERSION             	1
CREATED_ON             	October 10, 2018, 1:49 pm
#PROJECT
PR:PROJECT_TITLE                 	The proteomic and metabolomic characterization of exercise-induced sweat
PR:PROJECT_SUMMARY               	Proteomic and Metabolomic analysis of exercise-induced sweat to evaluate analyte
PR:PROJECT_SUMMARY               	correlation with human performance parameters.
PR:INSTITUTE                     	UES Inc, Air Force Research Laboratory
PR:LAST_NAME                     	Harshman
PR:FIRST_NAME                    	Sean
PR:ADDRESS                       	2510 Fifth Street, Area B, Building 840, WPAFB, OH 45433
PR:EMAIL                         	sean.harshman.ctr@us.af.mil
PR:PHONE                         	937-938-3785
#STUDY
ST:STUDY_TITLE                   	The in-gel proteomic characterization of exercise-induced sweat - (part III)
ST:STUDY_SUMMARY                 	The in-gel proteomic characterization of exercise-induced sweat to add depth to
ST:STUDY_SUMMARY                 	the evaluation of the sweat protein content.
ST:INSTITUTE                     	UES Inc, Air Force Research Laboratory
ST:LAST_NAME                     	Harshman
ST:FIRST_NAME                    	Sean
ST:ADDRESS                       	2510 Fifth Street, Area B, Building 840, WPAFB, OH 45433
ST:EMAIL                         	sean.harshman.ctr@us.af.mil
ST:PHONE                         	937-938-3785
#SUBJECT
SU:SUBJECT_TYPE                  	Human
SU:SUBJECT_SPECIES               	Homo sapiens
SU:TAXONOMY_ID                   	9606
#SUBJECT_SAMPLE_FACTORS:         	SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Additional sample data
SUBJECT_SAMPLE_FACTORS           	-	InGel_#1	Gel:175ug_Peptide	
SUBJECT_SAMPLE_FACTORS           	-	InGel_#2	Gel:175ug_Peptide	
SUBJECT_SAMPLE_FACTORS           	-	InGel_#3	Gel:175ug_Peptide	
SUBJECT_SAMPLE_FACTORS           	-	InGel_#4	Gel:175ug_Peptide	
SUBJECT_SAMPLE_FACTORS           	-	InGel_#5	Gel:175ug_Peptide	
SUBJECT_SAMPLE_FACTORS           	-	InGel_#6	Gel:175ug_Peptide	
SUBJECT_SAMPLE_FACTORS           	-	InGel_#7	Gel:175ug_Peptide	
SUBJECT_SAMPLE_FACTORS           	-	InGel_#8	Gel:175ug_Peptide	
SUBJECT_SAMPLE_FACTORS           	-	InGel_#9	Gel:175ug_Peptide	
SUBJECT_SAMPLE_FACTORS           	-	InGel_#10	Gel:175ug_Peptide	
SUBJECT_SAMPLE_FACTORS           	-	InGel_#11	Gel:175ug_Peptide	
SUBJECT_SAMPLE_FACTORS           	-	InGel_#12	Gel:175ug_Peptide	
SUBJECT_SAMPLE_FACTORS           	-	InGel_#13	Gel:175ug_Peptide	
SUBJECT_SAMPLE_FACTORS           	-	InGel_A	Gel:2ug_Protein	
SUBJECT_SAMPLE_FACTORS           	-	InGel_B	Gel:2ug_Protein	
SUBJECT_SAMPLE_FACTORS           	-	InGel_C	Gel:2ug_Protein	
SUBJECT_SAMPLE_FACTORS           	-	InGel_D	Gel:2ug_Protein	
SUBJECT_SAMPLE_FACTORS           	-	InGel_E	Gel:2ug_Protein	
SUBJECT_SAMPLE_FACTORS           	-	InGel_F	Gel:2ug_Protein	
SUBJECT_SAMPLE_FACTORS           	-	InGel_G	Gel:2ug_Protein	
SUBJECT_SAMPLE_FACTORS           	-	InGel_H	Gel:2ug_Protein	
SUBJECT_SAMPLE_FACTORS           	-	InGel_I	Gel:2ug_Protein	
SUBJECT_SAMPLE_FACTORS           	-	InGel_J	Gel:2ug_Protein	
SUBJECT_SAMPLE_FACTORS           	-	InGel_K	Gel:2ug_Protein	
SUBJECT_SAMPLE_FACTORS           	-	InGel_L	Gel:2ug_Protein	
SUBJECT_SAMPLE_FACTORS           	-	InGel_M	Gel:2ug_Protein	
SUBJECT_SAMPLE_FACTORS           	-	InGel_N	Gel:2ug_Protein	
SUBJECT_SAMPLE_FACTORS           	-	InGel_P	Gel:2ug_Protein	
SUBJECT_SAMPLE_FACTORS           	-	InGel_S	Gel:2ug_Protein	
#COLLECTION
CO:COLLECTION_SUMMARY            	Sweat collected from the forearms of participants.
CO:SAMPLE_TYPE                   	Sweat
#TREATMENT
TR:TREATMENT_SUMMARY             	Sweat induced by exercise on a treadmill.
#SAMPLEPREP
SP:SAMPLEPREP_SUMMARY            	Sweat samples were collected, pooled, and frozen on liquid nitrogen. Following,
SP:SAMPLEPREP_SUMMARY            	frozen samples were lyophilized and frozen until analysis. Samples were run in 2
SP:SAMPLEPREP_SUMMARY            	SDS-PAGE gels, excised, digested, and analyzed by LS-MS-MS. Gel 1 was loaded
SP:SAMPLEPREP_SUMMARY            	based on 175ug of sweat peptides (Factor) and Gel 2 was loaded based on 2ug of
SP:SAMPLEPREP_SUMMARY            	protein (Factor).
#CHROMATOGRAPHY
CH:CHROMATOGRAPHY_TYPE           	Reversed phase
CH:INSTRUMENT_NAME               	Thermo Dionex Ultimate 3000 RS
CH:COLUMN_NAME                   	Easy-Spray PepMap 50µm x 150µm, 100Å, 2µm
#ANALYSIS
AN:ANALYSIS_TYPE                 	MS
#MS
MS:MS_COMMENTS                   	-
MS:INSTRUMENT_NAME               	Thermo LTQ XL
MS:INSTRUMENT_TYPE               	Single quadrupole
MS:MS_TYPE                       	ESI
MS:ION_MODE                      	POSITIVE
#MS_METABOLITE_DATA
MS_METABOLITE_DATA:UNITS         	Spectral Counts
MS_METABOLITE_DATA_START
Samples	InGel_#1	InGel_#2	InGel_#3	InGel_#4	InGel_#5	InGel_#6	InGel_#7	InGel_#8	InGel_#9	InGel_#10	InGel_#11	InGel_#12	InGel_#13	InGel_A	InGel_B	InGel_C	InGel_D	InGel_E	InGel_F	InGel_G	InGel_H	InGel_I	InGel_J	InGel_K	InGel_L	InGel_M	InGel_N	InGel_P	InGel_S
Factors	Gel:175ug_Peptide	Gel:175ug_Peptide	Gel:175ug_Peptide	Gel:175ug_Peptide	Gel:175ug_Peptide	Gel:175ug_Peptide	Gel:175ug_Peptide	Gel:175ug_Peptide	Gel:175ug_Peptide	Gel:175ug_Peptide	Gel:175ug_Peptide	Gel:175ug_Peptide	Gel:175ug_Peptide	Gel:2ug_Protein	Gel:2ug_Protein	Gel:2ug_Protein	Gel:2ug_Protein	Gel:2ug_Protein	Gel:2ug_Protein	Gel:2ug_Protein	Gel:2ug_Protein	Gel:2ug_Protein	Gel:2ug_Protein	Gel:2ug_Protein	Gel:2ug_Protein	Gel:2ug_Protein	Gel:2ug_Protein	Gel:2ug_Protein	Gel:2ug_Protein
Keratin; type I cytoskeletal 10	1	105	2						4		5	18		48	3	4	90	2		1						1	3		152
Serum albumin	139										12			4	26	482	7												519
Keratin; type II cytoskeletal 1	15	27							1	1	61	11		41	3	28	56									2	3		133
Prolactin-inducible protein					50	87		25	1				15	2	3		1		9	8	127	308	145	78	130	15	11	4	841
Keratin; type II cytoskeletal 2 epidermal	9	22			1	2		5			42	17		16	3	8	27	1						1	1				57
Zinc-alpha-2-glycoprotein			54	22										7	1	2	14	304	29	17	4	2	2	3	4	3		6	398
Dermcidin	1				3	4	8	10	34	71			15	20	13	6	6	8	43	53	65	63	62	51	56	98	97	105	746
Caspase-14					1	13							6									54	30	3	45	26			158
Carboxypeptidase E		13									1						130		3	1									134
Keratin; type I cytoskeletal 14		11	2											3			1	7		3									14
Keratin; type I cytoskeletal 16		11																											
Clusterin				10										8	14	2	1	16	2	2									45
Keratin; type II cytoskeletal 6B	1	7									2	3		10		4	7		1	1						1			24
Polyubiquitin-C									110	72				2												90	558	3	653
Keratin; type I cytoskeletal 28		12										5		4			4												8
Secretoglobin family 1D member 2									16	15			1												3	32	75	33	143
Keratin; type II cytoskeletal 1b	2	2									6	1		6	3	5	18												32
Keratin; type I cytoskeletal 9		4									7			14		4	28												46
Keratin; type II cytoskeletal 6C		4									1			5		1	4		1	1						1			13
Beta-2-microglobulin													7											1	30	2		1	34
Arginase-1				5																									
Thioredoxin								4					1											31	21	1			53
Serpin B7			5	4														13											13
Ig gamma-1 chain C		5															31			2					4	1			38
Cystatin-A								4					1										2	39	39		1		81
Desmoglein-1															2	14	22	11	3	7	2		13	8	5				87
Serpin B3																			61							3	9		73
Serotransferrin															65														65
sp|O75223|GGCT_HUMAN Gamma-glutamylcyclotransferase																				4	55								59
Fibromodulin														4	23	28	4												59
Protein-glutamine gamma-glutamyltransferase E															28	2			19	2			3						54
Pro-cathepsin																			30	20									50
Ig kappa chain C region																			15	31				1					47
Serpin B4																			28							3	9		40
Mucin-like protein 1																			8	24									32
Cathepsin L2																			22		3								25
Golgi membrane protein 1														12	9	3													24
Protein S100-A7																								16	7				23
Secreted Ly-6/uPAR-related protein 1																									7	16			23
Ig lambda-3 chain C regions																			13	9									22
Superoxide dismutase [Cu-Zn]																					21								21
Catalase																	20												20
Alpha-1-antitrypsin															1		18												19
Serpin B12																	2	2	3				4	4	4				19
Attractin														17															17
Hemoglobin subunit beta																							3	12	2				17
Cathepsin D																			16										16
Lysozyme C																							4	11					15
Ig gamma-4 chain C														3			11								1				15
Serpin A12																		13											13
Alpha-2-macroglobulin														13															13
Cystatin-M																							1	2	10				13
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase																						1	10						11
Ig gamma-2 chain C														3			7								1				11
Triosephosphate isomerase																				10									10
Ly6/PLAUR domain-containing protein 3															6	3													9
Protein deglycase DJ-1																				9									9
Keratin; type II cytoskeletal 5														5		1	3												9
Phosphatidylethanolamine-binding protein 1																					8								8
Neuroserpin																	8												8
Serpin B8																		8											8
Actin; cytoplasmic 1															2			6											8
Cathepsin B																			4	4									8
Beta-hexosaminidase subunit beta																	1		3	4									8
Keratin; type I cytoskeletal 17														1			1	4											6
Desmocollin-1																		1								5			6
Kallikrein-7																			5	1									6
Vitamin D-binding protein																	6												6
Interleukin-36 gamma																						2	4						6
Protein S100-A8																									3	3			6
Eukaryotic translation initiation factor 6																			2	3									5
Galectin-3-binding protein																4													4
Ribonuclease UK114																								4					4
Glutaredoxin-1																										4			4
Apolipoprotein A-I																				4									4
Carcinoembryonic antigen-related cell adhesion molecule 5														4															4
Angiotensin-converting enzyme														4															4
Protein S100-A7A																								4					4
Heat shock-related 70 kDa protein 2																								1	3				4
Gamma-glutamyl hydrolase																			1	3									4
Ribosyldihydronicotinamide dehydrogenase [quinone]																				4									4
Ribonuclease 7																						2	2						4
Retinoid-inducible serine carboxypeptidase																			3										3
Fatty acid-binding protein; epidermal																							3						3
Phospholipase B-like 1																		3											3
Biotinidase															3														3
Lysosome-associated membrane glycoprotein 1																2	1												3
Epididymal secretory protein E1																					3								3
Cystatin-SN																							3						3
Monocyte differentiation antigen CD14																	3												3
Cystatin-S																							2						2
Proteasome subunit alpha type-7																			2										2
Peroxiredoxin-2																					2								2
MS_METABOLITE_DATA_END
#METABOLITES
METABOLITES_START
metabolite_name	Uniprot ID
Keratin; type I cytoskeletal 10	P13645
Serum albumin	P02768
Keratin; type II cytoskeletal 1	P04264
Prolactin-inducible protein	P12273
Keratin; type II cytoskeletal 2 epidermal	P35908
Zinc-alpha-2-glycoprotein	P25311
Dermcidin	P81605
Caspase-14	P31944
Carboxypeptidase E	P16870
Keratin; type I cytoskeletal 14	P02533
Keratin; type I cytoskeletal 16	P08779
Clusterin	P10909
Keratin; type II cytoskeletal 6B	P04259
Polyubiquitin-C	P0CG48
Keratin; type I cytoskeletal 28	Q7Z3Y7
Secretoglobin family 1D member 2	O95969
Keratin; type II cytoskeletal 1b	Q7Z794
Keratin; type I cytoskeletal 9	P35527
Keratin; type II cytoskeletal 6C	P48668
Beta-2-microglobulin	P61769
Arginase-1	P05089
Thioredoxin	P10599
Serpin B7	O75635
Ig gamma-1 chain C	P01857
Cystatin-A	P01040
Desmoglein-1	Q02413
Serpin B3	P29508
Serotransferrin	P02787
sp|O75223|GGCT_HUMAN Gamma-glutamylcyclotransferase	O75223
Fibromodulin	Q06828
Protein-glutamine gamma-glutamyltransferase E	Q08188
Pro-cathepsin	P09668
Ig kappa chain C region	P01834
Serpin B4	P48594
Mucin-like protein 1	Q96DR8
Cathepsin L2	O60911
Golgi membrane protein 1	Q8NBJ4
Protein S100-A7	P31151
Secreted Ly-6/uPAR-related protein 1	P55000
Ig lambda-3 chain C regions	P0CG06
Superoxide dismutase [Cu-Zn]	P00441
Catalase	P04040
Alpha-1-antitrypsin	P01009
Serpin B12	Q96P63
Attractin	O75882
Hemoglobin subunit beta	P68871
Cathepsin D	P07339
Lysozyme C	P61626
Ig gamma-4 chain C	P01861
Serpin A12	Q8IW75
Alpha-2-macroglobulin	P01023
Cystatin-M	Q15828
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase	P20933
Ig gamma-2 chain C	P01859
Triosephosphate isomerase	P60174
Ly6/PLAUR domain-containing protein 3	O95274
Protein deglycase DJ-1	Q99497
Keratin; type II cytoskeletal 5	P13647
Phosphatidylethanolamine-binding protein 1	P30086
Neuroserpin	Q99574
Serpin B8	P50452
Actin; cytoplasmic 1	P60709
Cathepsin B	P07858
Beta-hexosaminidase subunit beta	P07686
Keratin; type I cytoskeletal 17	Q04695
Desmocollin-1	Q08554
Kallikrein-7	P49862
Vitamin D-binding protein	P02774
Interleukin-36 gamma	Q9NZH8
Protein S100-A8	P05109
Eukaryotic translation initiation factor 6	P56537
Galectin-3-binding protein	Q08380
Ribonuclease UK114	P52758
Glutaredoxin-1	P35754
Apolipoprotein A-I	P02647
Carcinoembryonic antigen-related cell adhesion molecule 5	P06731
Angiotensin-converting enzyme	P12821
Protein S100-A7A	Q86SG5
Heat shock-related 70 kDa protein 2	P54652
Gamma-glutamyl hydrolase	Q92820
Ribosyldihydronicotinamide dehydrogenase [quinone]	P16083
Ribonuclease 7	Q9H1E1
Retinoid-inducible serine carboxypeptidase	Q9HB40
Fatty acid-binding protein; epidermal	Q01469
Phospholipase B-like 1	Q6P4A8
Biotinidase	P43251
Lysosome-associated membrane glycoprotein 1	P11279
Epididymal secretory protein E1	P61916
Cystatin-SN	P01037
Monocyte differentiation antigen CD14	P08571
Cystatin-S	P01036
Proteasome subunit alpha type-7	O14818
Peroxiredoxin-2	P32119
METABOLITES_END
#END