#METABOLOMICS WORKBENCH jravilap_20190610_065934_mwtab.txt DATATRACK_ID:1734 STUDY_ID:ST001192 ANALYSIS_ID:AN001985 PROJECT_ID:PR000804 VERSION 1 CREATED_ON June 12, 2019, 10:02 pm #PROJECT PR:PROJECT_TITLE A large library of gut bacterial isolates paired with longitudinal multiomics PR:PROJECT_TITLE data enables mechanistic microbiome studies PR:PROJECT_TYPE Metabolite profiling of human stool from a healthy cohort PR:PROJECT_SUMMARY Here, we present the Broad Institute-OpenBiome Microbiome Library (BIO-ML), a PR:PROJECT_SUMMARY comprehensive collection of 7,758 gut bacterial isolates with 3,632 paired PR:PROJECT_SUMMARY genome sequences, and densely sampled multi-omic time series from many PR:PROJECT_SUMMARY individual humans. Our longitudinal data reveal (1) that microbial species PR:PROJECT_SUMMARY maintain stable population sizes within and across humans, (2) that commonly PR:PROJECT_SUMMARY used ‘omic survey methods are more reliable when using averages over multiple PR:PROJECT_SUMMARY days of sampling, (3) that variation of gut metabolites within people over time PR:PROJECT_SUMMARY is driven by amino acid levels, while differences across people are driven by PR:PROJECT_SUMMARY differences in bile acids, and (4) that functional evolution and genomic PR:PROJECT_SUMMARY diversification can be used to infer eco-evolutionary dynamics and in vivo PR:PROJECT_SUMMARY selection pressures for strains within individual people. The BIO-ML is a unique PR:PROJECT_SUMMARY resource that will enable hypothesis-driven microbiome research and the rational PR:PROJECT_SUMMARY design of microbial therapeutics. PR:INSTITUTE Broad Institute of MIT and Harvard PR:DEPARTMENT Metabolomics Platform PR:LAST_NAME Avila PR:FIRST_NAME Julian PR:ADDRESS 415 Main Street, Rm 7175, Cambridge, MA, 02142, USA PR:EMAIL jravilap@broadinstitute.org PR:PHONE 6177148264 PR:CONTRIBUTORS Mathilde Poyet, Mathieu Groussin, Sean M Gibbons, Julian Avila-Pacheco, Xiaogang PR:CONTRIBUTORS Jiang, Sean M Kearney, Allison R Perrotta, Shijie Zhao, Tammi Lieberman, P K PR:CONTRIBUTORS Swanson, Mark Smith, Shane Roesemann, Jessica E Alexander, Scott A. Rich, PR:CONTRIBUTORS Jonathan Livny, Hera Vlamakis, Clary Clish, Kevin Bullock, Amy Deik, Justin PR:CONTRIBUTORS Scott, Kerry Pierce, Ramnik Xavier, Eric J Alm #STUDY ST:STUDY_TITLE A library of human gut bacterial isolates paired with longitudinal multiomics ST:STUDY_TITLE data enables mechanistic microbiome research ST:STUDY_TYPE Stool metabolite profiling ST:STUDY_SUMMARY Fecal microbiota transplantation (FMT) is used in the treatment of ST:STUDY_SUMMARY microbiome-associated diseases such as Clostridium difficile infections. In ST:STUDY_SUMMARY order to develop synthetic therapeutics and customized disease treatments we ST:STUDY_SUMMARY will need to understand the bacterial communities in the stool samples used in ST:STUDY_SUMMARY such treatments. For this purpose, a microbiome library was generated using ST:STUDY_SUMMARY human stool obtained from healthy human FMT recruited by OpenBiome, a non-profit ST:STUDY_SUMMARY organization that provides fecal microbiome therapeutics. In addition to ST:STUDY_SUMMARY characterizing the bacterial populations and obtaining bacterial isolates from ST:STUDY_SUMMARY FMT samples, we conducted metabolite profiling with the goal of: (1) generating ST:STUDY_SUMMARY a library of metabolites in FMT samples, (2) Identifying metabolites associated ST:STUDY_SUMMARY with defined bacterial populations, and (3) identifying microbial metabolites ST:STUDY_SUMMARY with immunoregulatory functions. We conducted metabolite profiling on a subset ST:STUDY_SUMMARY consisting of 180 stool samples from 84 donors using four nontargeted liquid ST:STUDY_SUMMARY chromatography mass spectrometry (LC-MS) methods. Generated data were processed, ST:STUDY_SUMMARY isotopes removed, and adducts and fragments clustered. The identity of known ST:STUDY_SUMMARY metabolites was determined based on matching retention times of neat standards ST:STUDY_SUMMARY run in parallel with the study. ST:INSTITUTE Broad Institute of MIT and Harvard ST:LAST_NAME Avila ST:FIRST_NAME Julian ST:ADDRESS 415 Main Street ST:EMAIL jravilap@broadinstitute.org ST:PHONE 617-714-8264 ST:TOTAL_SUBJECTS 84 #SUBJECT SU:SUBJECT_TYPE Human SU:SUBJECT_SPECIES Homo sapiens SU:TAXONOMY_ID 9606 #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Additional sample data SUBJECT_SAMPLE_FACTORS aa aa-0163 Diet:- Time Point=0163; Age=31; Sex=M; Ht_in=73; Wt_lbs=188; BMI=24.8; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS ab ab-0140 Diet:- Time Point=0140; Age=32; Sex=M; Ht_in=--; Wt_lbs=--; BMI=--; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS ac ac-0002 Diet:- Time Point=0002; Age=32; Sex=F; Ht_in=63; Wt_lbs=114.4; BMI=19.5; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS ad ad-0002 Diet:- Time Point=0002; Age=22; Sex=M; Ht_in=71; Wt_lbs=155; BMI=21.8; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS ad ad-0005 Diet:- Time Point=0005; Age=22; Sex=M; Ht_in=71; Wt_lbs=155; BMI=21.8; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS ae ae-0001 Diet:Omnivore Time Point=0001; Age=22; Sex=M; Ht_in=73; Wt_lbs=195; BMI=26; WaistCirc_in=--; Diet_notes=Avoids some fruits SUBJECT_SAMPLE_FACTORS ae ae-0003 Diet:Omnivore Time Point=0003; Age=22; Sex=M; Ht_in=73; Wt_lbs=195; BMI=26; WaistCirc_in=--; Diet_notes=Avoids some fruits SUBJECT_SAMPLE_FACTORS ae ae-0007 Diet:Omnivore Time Point=0007; Age=22; Sex=M; Ht_in=73; Wt_lbs=195; BMI=26; WaistCirc_in=--; Diet_notes=Avoids some fruits SUBJECT_SAMPLE_FACTORS ae ae-0024 Diet:Omnivore Time Point=0024; Age=22; Sex=M; Ht_in=73; Wt_lbs=195; BMI=26; WaistCirc_in=--; Diet_notes=Avoids some fruits SUBJECT_SAMPLE_FACTORS ae ae-0069 Diet:Omnivore Time Point=0069; Age=22; Sex=M; Ht_in=73; Wt_lbs=195; BMI=26; WaistCirc_in=--; Diet_notes=Avoids some fruits SUBJECT_SAMPLE_FACTORS af af-0003 Diet:- Time Point=0003; Age=22; Sex=M; Ht_in=72; Wt_lbs=175; BMI=23.1; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS af af-0060 Diet:- Time Point=0060; Age=22; Sex=M; Ht_in=72; Wt_lbs=175; BMI=23.1; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS ag ag-0001 Diet:- Time Point=0001; Age=32; Sex=M; Ht_in=61; Wt_lbs=208; BMI=29.8; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS ag ag-0005 Diet:- Time Point=0005; Age=32; Sex=M; Ht_in=61; Wt_lbs=208; BMI=29.8; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS ah ah-0002 Diet:- Time Point=0002; Age=44; Sex=M; Ht_in=61; Wt_lbs=195; BMI=28.3; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS ah ah-0028 Diet:- Time Point=0028; Age=44; Sex=M; Ht_in=61; Wt_lbs=195; BMI=28.3; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS ai ai-0002 Diet:- Time Point=0002; Age=20; Sex=M; Ht_in=71; Wt_lbs=150; BMI=22.1; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS aj aj-0001 Diet:- Time Point=0001; Age=33; Sex=M; Ht_in=61; Wt_lbs=190; BMI=29.1; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS ak ak-0001 Diet:- Time Point=0001; Age=22; Sex=F; Ht_in=64; Wt_lbs=113; BMI=19.8; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS ak ak-0010 Diet:- Time Point=0010; Age=22; Sex=F; Ht_in=64; Wt_lbs=113; BMI=19.8; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS al al-0002 Diet:- Time Point=0002; Age=25; Sex=M; Ht_in=73; Wt_lbs=185; BMI=24.4; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS am am-0001 Diet:Vegetarian Time Point=0001; Age=28; Sex=M; Ht_in=71; Wt_lbs=174.2; BMI=23; WaistCirc_in=35; Diet_notes=leans toward vegetarian SUBJECT_SAMPLE_FACTORS am am-0003 Diet:Vegetarian Time Point=0003; Age=28; Sex=M; Ht_in=71; Wt_lbs=174.2; BMI=23; WaistCirc_in=35; Diet_notes=leans toward vegetarian SUBJECT_SAMPLE_FACTORS am am-0006 Diet:Vegetarian Time Point=0006; Age=28; Sex=M; Ht_in=71; Wt_lbs=174.2; BMI=23; WaistCirc_in=35; Diet_notes=leans toward vegetarian SUBJECT_SAMPLE_FACTORS am am-0014 Diet:Vegetarian Time Point=0014; Age=28; Sex=M; Ht_in=71; Wt_lbs=174.2; BMI=23; WaistCirc_in=35; Diet_notes=leans toward vegetarian SUBJECT_SAMPLE_FACTORS am am-0025 Diet:Vegetarian Time Point=0025; Age=28; Sex=M; Ht_in=71; Wt_lbs=174.2; BMI=23; WaistCirc_in=35; Diet_notes=leans toward vegetarian SUBJECT_SAMPLE_FACTORS am am-0052 Diet:Vegetarian Time Point=0052; Age=28; Sex=M; Ht_in=71; Wt_lbs=174.2; BMI=23; WaistCirc_in=35; Diet_notes=leans toward vegetarian SUBJECT_SAMPLE_FACTORS am am-0070 Diet:Vegetarian Time Point=0070; Age=28; Sex=M; Ht_in=71; Wt_lbs=174.2; BMI=23; WaistCirc_in=35; Diet_notes=leans toward vegetarian SUBJECT_SAMPLE_FACTORS am am-0111 Diet:Vegetarian Time Point=0111; Age=28; Sex=M; Ht_in=71; Wt_lbs=174.2; BMI=23; WaistCirc_in=35; Diet_notes=leans toward vegetarian SUBJECT_SAMPLE_FACTORS am am-0224 Diet:Vegetarian Time Point=0224; Age=28; Sex=M; Ht_in=71; Wt_lbs=174.2; BMI=23; WaistCirc_in=35; Diet_notes=leans toward vegetarian SUBJECT_SAMPLE_FACTORS an an-0001 Diet:- Time Point=0001; Age=23; Sex=F; Ht_in=71; Wt_lbs=131.6; BMI=21.4; WaistCirc_in=30; Diet_notes=- SUBJECT_SAMPLE_FACTORS an an-0002 Diet:- Time Point=0002; Age=23; Sex=F; Ht_in=71; Wt_lbs=131.6; BMI=21.4; WaistCirc_in=30; Diet_notes=- SUBJECT_SAMPLE_FACTORS an an-0004 Diet:- Time Point=0004; Age=23; Sex=F; Ht_in=71; Wt_lbs=131.6; BMI=21.4; WaistCirc_in=30; Diet_notes=- SUBJECT_SAMPLE_FACTORS an an-0013 Diet:- Time Point=0013; Age=23; Sex=F; Ht_in=71; Wt_lbs=131.6; BMI=21.4; WaistCirc_in=30; Diet_notes=- SUBJECT_SAMPLE_FACTORS an an-0025 Diet:- Time Point=0025; Age=23; Sex=F; Ht_in=71; Wt_lbs=131.6; BMI=21.4; WaistCirc_in=30; Diet_notes=- SUBJECT_SAMPLE_FACTORS an an-0030 Diet:- Time Point=0030; Age=23; Sex=F; Ht_in=71; Wt_lbs=131.6; BMI=21.4; WaistCirc_in=30; Diet_notes=- SUBJECT_SAMPLE_FACTORS an an-0082 Diet:- Time Point=0082; Age=23; Sex=F; Ht_in=71; Wt_lbs=131.6; BMI=21.4; WaistCirc_in=30; Diet_notes=- SUBJECT_SAMPLE_FACTORS ao ao-0001 Diet:- Time Point=0001; Age=37; Sex=M; Ht_in=61; Wt_lbs=190.6; BMI=26.2; WaistCirc_in=33.8; Diet_notes=- SUBJECT_SAMPLE_FACTORS ao ao-0004 Diet:- Time Point=0004; Age=37; Sex=M; Ht_in=61; Wt_lbs=190.6; BMI=26.2; WaistCirc_in=33.8; Diet_notes=- SUBJECT_SAMPLE_FACTORS ao ao-0025 Diet:- Time Point=0025; Age=37; Sex=M; Ht_in=61; Wt_lbs=190.6; BMI=26.2; WaistCirc_in=33.8; Diet_notes=- SUBJECT_SAMPLE_FACTORS ao ao-0049 Diet:- Time Point=0049; Age=37; Sex=M; Ht_in=61; Wt_lbs=190.6; BMI=26.2; WaistCirc_in=33.8; Diet_notes=- SUBJECT_SAMPLE_FACTORS ao ao-0085 Diet:- Time Point=0085; Age=37; Sex=M; Ht_in=61; Wt_lbs=190.6; BMI=26.2; WaistCirc_in=33.8; Diet_notes=- SUBJECT_SAMPLE_FACTORS ao ao-0090 Diet:- Time Point=0090; Age=37; Sex=M; Ht_in=61; Wt_lbs=190.6; BMI=26.2; WaistCirc_in=33.8; Diet_notes=- SUBJECT_SAMPLE_FACTORS ap ap-0001 Diet:Omnivore Time Point=0001; Age=31; Sex=F; Ht_in=64; Wt_lbs=114.6; BMI=21; WaistCirc_in=26.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS ap ap-0037 Diet:Omnivore Time Point=0037; Age=31; Sex=F; Ht_in=64; Wt_lbs=114.6; BMI=21; WaistCirc_in=26.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS aq aq-0004 Diet:Vegetarian Time Point=0004; Age=24; Sex=F; Ht_in=64; Wt_lbs=145; BMI=22.5; WaistCirc_in=28.2; Diet_notes=vegetarian (eats fish and eggs) SUBJECT_SAMPLE_FACTORS aq aq-0015 Diet:Vegetarian Time Point=0015; Age=24; Sex=F; Ht_in=64; Wt_lbs=145; BMI=22.5; WaistCirc_in=28.2; Diet_notes=vegetarian (eats fish and eggs) SUBJECT_SAMPLE_FACTORS ar ar-0039 Diet:- Time Point=0039; Age=25; Sex=F; Ht_in=71; Wt_lbs=148; BMI=21.9; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS as as-0033 Diet:- Time Point=0033; Age=28; Sex=M; Ht_in=71; Wt_lbs=168.2; BMI=26.4; WaistCirc_in=36.6; Diet_notes=- SUBJECT_SAMPLE_FACTORS at at-0004 Diet:- Time Point=0004; Age=24; Sex=F; Ht_in=62; Wt_lbs=114; BMI=20.9; WaistCirc_in=27.2; Diet_notes=- SUBJECT_SAMPLE_FACTORS at at-0044 Diet:- Time Point=0044; Age=24; Sex=F; Ht_in=62; Wt_lbs=114; BMI=20.9; WaistCirc_in=27.2; Diet_notes=- SUBJECT_SAMPLE_FACTORS au au-0002 Diet:- Time Point=0002; Age=22; Sex=M; Ht_in=75; Wt_lbs=157.6; BMI=20.1; WaistCirc_in=31; Diet_notes=- SUBJECT_SAMPLE_FACTORS av av-0006 Diet:- Time Point=0006; Age=27; Sex=F; Ht_in=71; Wt_lbs=130.6; BMI=21.2; WaistCirc_in=31; Diet_notes=- SUBJECT_SAMPLE_FACTORS av av-0107 Diet:- Time Point=0107; Age=27; Sex=F; Ht_in=71; Wt_lbs=130.6; BMI=21.2; WaistCirc_in=31; Diet_notes=- SUBJECT_SAMPLE_FACTORS aw aw-0001 Diet:Omnivore Time Point=0001; Age=26; Sex=F; Ht_in=71; Wt_lbs=140; BMI=23.3; WaistCirc_in=28.7; Diet_notes=- SUBJECT_SAMPLE_FACTORS aw aw-0036 Diet:Omnivore Time Point=0036; Age=26; Sex=F; Ht_in=71; Wt_lbs=140; BMI=23.3; WaistCirc_in=28.7; Diet_notes=- SUBJECT_SAMPLE_FACTORS ax ax-0001 Diet:Omnivore Time Point=0001; Age=43; Sex=M; Ht_in=69; Wt_lbs=182.2; BMI=27.3; WaistCirc_in=35; Diet_notes=on/off Paleo diet in summer SUBJECT_SAMPLE_FACTORS ax ax-0090 Diet:Omnivore Time Point=0090; Age=43; Sex=M; Ht_in=69; Wt_lbs=182.2; BMI=27.3; WaistCirc_in=35; Diet_notes=on/off Paleo diet in summer SUBJECT_SAMPLE_FACTORS ay ay-0001 Diet:Omnivore Time Point=0001; Age=35; Sex=M; Ht_in=71; Wt_lbs=169.2; BMI=25.7; WaistCirc_in=35; Diet_notes=- SUBJECT_SAMPLE_FACTORS az az-0001 Diet:Omnivore Time Point=0001; Age=26; Sex=F; Ht_in=65; Wt_lbs=144.6; BMI=24.5; WaistCirc_in=32.5; Diet_notes=avoids dairy SUBJECT_SAMPLE_FACTORS ba ba-0001 Diet:Omnivore Time Point=0001; Age=20; Sex=M; Ht_in=73; Wt_lbs=159.6; BMI=20.9; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS ba ba-0003 Diet:Omnivore Time Point=0003; Age=20; Sex=M; Ht_in=73; Wt_lbs=159.6; BMI=20.9; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS ba ba-0010 Diet:Omnivore Time Point=0010; Age=20; Sex=M; Ht_in=73; Wt_lbs=159.6; BMI=20.9; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS ba ba-0018 Diet:Omnivore Time Point=0018; Age=20; Sex=M; Ht_in=73; Wt_lbs=159.6; BMI=20.9; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS ba ba-0025 Diet:Omnivore Time Point=0025; Age=20; Sex=M; Ht_in=73; Wt_lbs=159.6; BMI=20.9; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS ba ba-0066 Diet:Omnivore Time Point=0066; Age=20; Sex=M; Ht_in=73; Wt_lbs=159.6; BMI=20.9; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS ba ba-0113 Diet:Omnivore Time Point=0113; Age=20; Sex=M; Ht_in=73; Wt_lbs=159.6; BMI=20.9; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS bc bc-0002 Diet:Omnivore Time Point=0002; Age=27; Sex=F; Ht_in=62; Wt_lbs=117.4; BMI=21.3; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS bc bc-0003 Diet:Omnivore Time Point=0003; Age=27; Sex=F; Ht_in=62; Wt_lbs=117.4; BMI=21.3; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS bc bc-0013 Diet:Omnivore Time Point=0013; Age=27; Sex=F; Ht_in=62; Wt_lbs=117.4; BMI=21.3; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS bc bc-0018 Diet:Omnivore Time Point=0018; Age=27; Sex=F; Ht_in=62; Wt_lbs=117.4; BMI=21.3; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS bc bc-0029 Diet:Omnivore Time Point=0029; Age=27; Sex=F; Ht_in=62; Wt_lbs=117.4; BMI=21.3; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS bc bc-0042 Diet:Omnivore Time Point=0042; Age=27; Sex=F; Ht_in=62; Wt_lbs=117.4; BMI=21.3; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS bc bc-0068 Diet:Omnivore Time Point=0068; Age=27; Sex=F; Ht_in=62; Wt_lbs=117.4; BMI=21.3; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS bc bc-0105 Diet:Omnivore Time Point=0105; Age=27; Sex=F; Ht_in=62; Wt_lbs=117.4; BMI=21.3; WaistCirc_in=--; Diet_notes=- SUBJECT_SAMPLE_FACTORS bd bd-0033 Diet:Vegetarian Time Point=0033; Age=33; Sex=M; Ht_in=61; Wt_lbs=177.2; BMI=24.9; WaistCirc_in=35.1; Diet_notes=occ eats fish, dairy SUBJECT_SAMPLE_FACTORS be be-0001 Diet:Omnivore Time Point=0001; Age=24; Sex=M; Ht_in=74; Wt_lbs=180.4; BMI=23.5; WaistCirc_in=35; Diet_notes=avoids dairy SUBJECT_SAMPLE_FACTORS bf bf-0003 Diet:Omnivore Time Point=0003; Age=27; Sex=M; Ht_in=67; Wt_lbs=184.6; BMI=28.1; WaistCirc_in=36; Diet_notes=- SUBJECT_SAMPLE_FACTORS bf bf-0108 Diet:Omnivore Time Point=0108; Age=27; Sex=M; Ht_in=67; Wt_lbs=184.6; BMI=28.1; WaistCirc_in=36; Diet_notes=- SUBJECT_SAMPLE_FACTORS bh bh-0001 Diet:Vegetarian Time Point=0001; Age=33; Sex=F; Ht_in=66; Wt_lbs=126.8; BMI=20.4; WaistCirc_in=36; Diet_notes=avoids dairy and bread SUBJECT_SAMPLE_FACTORS bh bh-0003 Diet:Vegetarian Time Point=0003; Age=33; Sex=F; Ht_in=66; Wt_lbs=126.8; BMI=20.4; WaistCirc_in=36; Diet_notes=avoids dairy and bread SUBJECT_SAMPLE_FACTORS bh bh-0012 Diet:Vegetarian Time Point=0012; Age=33; Sex=F; Ht_in=66; Wt_lbs=126.8; BMI=20.4; WaistCirc_in=36; Diet_notes=avoids dairy and bread SUBJECT_SAMPLE_FACTORS bh bh-0025 Diet:Vegetarian Time Point=0025; Age=33; Sex=F; Ht_in=66; Wt_lbs=126.8; BMI=20.4; WaistCirc_in=36; Diet_notes=avoids dairy and bread SUBJECT_SAMPLE_FACTORS bh bh-0050 Diet:Vegetarian Time Point=0050; Age=33; Sex=F; Ht_in=66; Wt_lbs=126.8; BMI=20.4; WaistCirc_in=36; Diet_notes=avoids dairy and bread SUBJECT_SAMPLE_FACTORS bh bh-0066 Diet:Vegetarian Time Point=0066; Age=33; Sex=F; Ht_in=66; Wt_lbs=126.8; BMI=20.4; WaistCirc_in=36; Diet_notes=avoids dairy and bread SUBJECT_SAMPLE_FACTORS bh bh-0087 Diet:Vegetarian Time Point=0087; Age=33; Sex=F; Ht_in=66; Wt_lbs=126.8; BMI=20.4; WaistCirc_in=36; Diet_notes=avoids dairy and bread SUBJECT_SAMPLE_FACTORS bh bh-0123 Diet:Vegetarian Time Point=0123; Age=33; Sex=F; Ht_in=66; Wt_lbs=126.8; BMI=20.4; WaistCirc_in=36; Diet_notes=avoids dairy and bread SUBJECT_SAMPLE_FACTORS bi bi-0001 Diet:- Time Point=0001; Age=24; Sex=M; Ht_in=61; Wt_lbs=146; BMI=21.6; WaistCirc_in=31.4; Diet_notes=- SUBJECT_SAMPLE_FACTORS bi bi-0026 Diet:- Time Point=0026; Age=24; Sex=M; Ht_in=61; Wt_lbs=146; BMI=21.6; WaistCirc_in=31.4; Diet_notes=- SUBJECT_SAMPLE_FACTORS bj bj-0001 Diet:- Time Point=0001; Age=26; Sex=M; Ht_in=71; Wt_lbs=181.6; BMI=27; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS bj bj-0004 Diet:- Time Point=0004; Age=26; Sex=M; Ht_in=71; Wt_lbs=181.6; BMI=27; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS bj bj-0014 Diet:- Time Point=0014; Age=26; Sex=M; Ht_in=71; Wt_lbs=181.6; BMI=27; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS bj bj-0032 Diet:- Time Point=0032; Age=26; Sex=M; Ht_in=71; Wt_lbs=181.6; BMI=27; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS bj bj-0056 Diet:- Time Point=0056; Age=26; Sex=M; Ht_in=71; Wt_lbs=181.6; BMI=27; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS bj bj-0095 Diet:- Time Point=0095; Age=26; Sex=M; Ht_in=71; Wt_lbs=181.6; BMI=27; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS bj bj-0110 Diet:- Time Point=0110; Age=26; Sex=M; Ht_in=71; Wt_lbs=181.6; BMI=27; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS bk bk-0002 Diet:- Time Point=0002; Age=25; Sex=F; Ht_in=67; Wt_lbs=115; BMI=17.5; WaistCirc_in=31; Diet_notes=- SUBJECT_SAMPLE_FACTORS bl bl-0009 Diet:- Time Point=0009; Age=29; Sex=M; Ht_in=71; Wt_lbs=157.2; BMI=23.6; WaistCirc_in=33; Diet_notes=- SUBJECT_SAMPLE_FACTORS bm bm-0002 Diet:- Time Point=0002; Age=29; Sex=M; Ht_in=70; Wt_lbs=165.6; BMI=23.7; WaistCirc_in=35; Diet_notes=- SUBJECT_SAMPLE_FACTORS bm bm-0013 Diet:- Time Point=0013; Age=29; Sex=M; Ht_in=70; Wt_lbs=165.6; BMI=23.7; WaistCirc_in=35; Diet_notes=- SUBJECT_SAMPLE_FACTORS bn bn-0002 Diet:- Time Point=0002; Age=29; Sex=F; Ht_in=63; Wt_lbs=119.6; BMI=20.3; WaistCirc_in=31; Diet_notes=- SUBJECT_SAMPLE_FACTORS bn bn-0038 Diet:- Time Point=0038; Age=29; Sex=F; Ht_in=63; Wt_lbs=119.6; BMI=20.3; WaistCirc_in=31; Diet_notes=- SUBJECT_SAMPLE_FACTORS bo bo-0001 Diet:Omnivore Time Point=0001; Age=36; Sex=M; Ht_in=74; Wt_lbs=174.8; BMI=22.2; WaistCirc_in=34; Diet_notes=- SUBJECT_SAMPLE_FACTORS bo bo-0122 Diet:Omnivore Time Point=0122; Age=36; Sex=M; Ht_in=74; Wt_lbs=174.8; BMI=22.2; WaistCirc_in=34; Diet_notes=- SUBJECT_SAMPLE_FACTORS bp bp-0002 Diet:- Time Point=0002; Age=28; Sex=M; Ht_in=71; Wt_lbs=137.6; BMI=19.7; WaistCirc_in=30.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS bq bq-0002 Diet:Omnivore Time Point=0002; Age=26; Sex=M; Ht_in=73; Wt_lbs=190; BMI=24.9; WaistCirc_in=35; Diet_notes=- SUBJECT_SAMPLE_FACTORS bq bq-0068 Diet:Omnivore Time Point=0068; Age=26; Sex=M; Ht_in=73; Wt_lbs=190; BMI=24.9; WaistCirc_in=35; Diet_notes=- SUBJECT_SAMPLE_FACTORS br br-0002 Diet:Omnivore Time Point=0002; Age=25; Sex=M; Ht_in=71; Wt_lbs=145; BMI=22; WaistCirc_in=30; Diet_notes=- SUBJECT_SAMPLE_FACTORS bs bs-0008 Diet:Omnivore Time Point=0008; Age=32; Sex=M; Ht_in=75; Wt_lbs=188; BMI=23.4; WaistCirc_in=33; Diet_notes=- SUBJECT_SAMPLE_FACTORS bt bt-0001 Diet:- Time Point=0001; Age=30; Sex=M; Ht_in=71; Wt_lbs=162; BMI=24.7; WaistCirc_in=35.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS bt bt-0039 Diet:- Time Point=0039; Age=30; Sex=M; Ht_in=71; Wt_lbs=162; BMI=24.7; WaistCirc_in=35.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS bu bu-0001 Diet:Omnivore Time Point=0001; Age=21; Sex=M; Ht_in=71; Wt_lbs=139; BMI=20.5; WaistCirc_in=30; Diet_notes=Avoids processed foods SUBJECT_SAMPLE_FACTORS bu bu-0080 Diet:Omnivore Time Point=0080; Age=21; Sex=M; Ht_in=71; Wt_lbs=139; BMI=20.5; WaistCirc_in=30; Diet_notes=Avoids processed foods SUBJECT_SAMPLE_FACTORS bv bv-0001 Diet:- Time Point=0001; Age=29; Sex=M; Ht_in=71; Wt_lbs=179.6; BMI=26.9; WaistCirc_in=36.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS bw bw-0001 Diet:- Time Point=0001; Age=26; Sex=M; Ht_in=61; Wt_lbs=151.4; BMI=21.4; WaistCirc_in=30.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS bw bw-0033 Diet:- Time Point=0033; Age=26; Sex=M; Ht_in=61; Wt_lbs=151.4; BMI=21.4; WaistCirc_in=30.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS bx bx-0001 Diet:Omnivore Time Point=0001; Age=23; Sex=M; Ht_in=72; Wt_lbs=164.2; BMI=22.4; WaistCirc_in=33; Diet_notes=- SUBJECT_SAMPLE_FACTORS bx bx-0057 Diet:Omnivore Time Point=0057; Age=23; Sex=M; Ht_in=72; Wt_lbs=164.2; BMI=22.4; WaistCirc_in=33; Diet_notes=- SUBJECT_SAMPLE_FACTORS by by-0002 Diet:Omnivore Time Point=0002; Age=24; Sex=M; Ht_in=71; Wt_lbs=167.6; BMI=24.3; WaistCirc_in=35; Diet_notes=- SUBJECT_SAMPLE_FACTORS bz bz-0033 Diet:Omnivore Time Point=0033; Age=22; Sex=M; Ht_in=65; Wt_lbs=136.6; BMI=22.3; WaistCirc_in=32.4; Diet_notes=- SUBJECT_SAMPLE_FACTORS ca ca-0001 Diet:Omnivore Time Point=0001; Age=22; Sex=M; Ht_in=71; Wt_lbs=172; BMI=25.5; WaistCirc_in=34; Diet_notes=- SUBJECT_SAMPLE_FACTORS ca ca-0012 Diet:Omnivore Time Point=0012; Age=22; Sex=M; Ht_in=71; Wt_lbs=172; BMI=25.5; WaistCirc_in=34; Diet_notes=- SUBJECT_SAMPLE_FACTORS cb cb-0001 Diet:Omnivore Time Point=0001; Age=19; Sex=M; Ht_in=61; Wt_lbs=143.6; BMI=20.3; WaistCirc_in=30.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS cb cb-0051 Diet:Omnivore Time Point=0051; Age=19; Sex=M; Ht_in=61; Wt_lbs=143.6; BMI=20.3; WaistCirc_in=30.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS cc cc-0002 Diet:Omnivore Time Point=0002; Age=26; Sex=M; Ht_in=71; Wt_lbs=160; BMI=23.7; WaistCirc_in=34; Diet_notes=- SUBJECT_SAMPLE_FACTORS cd cd-0050 Diet:Omnivore Time Point=0050; Age=34; Sex=M; Ht_in=69; Wt_lbs=165.2; BMI=23.9; WaistCirc_in=35; Diet_notes=- SUBJECT_SAMPLE_FACTORS ce ce-0001 Diet:- Time Point=0001; Age=32; Sex=M; Ht_in=71; Wt_lbs=132.4; BMI=21.4; WaistCirc_in=31.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS ce ce-0007 Diet:- Time Point=0007; Age=32; Sex=M; Ht_in=71; Wt_lbs=132.4; BMI=21.4; WaistCirc_in=31.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS cf cf-0001 Diet:Omnivore Time Point=0001; Age=26; Sex=M; Ht_in=72; Wt_lbs=207.2; BMI=27.5; WaistCirc_in=35; Diet_notes=- SUBJECT_SAMPLE_FACTORS cf cf-0037 Diet:Omnivore Time Point=0037; Age=26; Sex=M; Ht_in=72; Wt_lbs=207.2; BMI=27.5; WaistCirc_in=35; Diet_notes=- SUBJECT_SAMPLE_FACTORS cg cg-0001 Diet:Omnivore Time Point=0001; Age=29; Sex=M; Ht_in=73; Wt_lbs=187; BMI=24.6; WaistCirc_in=34; Diet_notes=- SUBJECT_SAMPLE_FACTORS ch ch-0008 Diet:Omnivore Time Point=0008; Age=24; Sex=M; Ht_in=67; Wt_lbs=173.8; BMI=27; WaistCirc_in=32.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS cj cj-0004 Diet:Omnivore Time Point=0004; Age=35; Sex=M; Ht_in=70; Wt_lbs=170; BMI=24.4; WaistCirc_in=35.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS cl cl-0001 Diet:Omnivore Time Point=0001; Age=29; Sex=M; Ht_in=70; Wt_lbs=156; BMI=22; WaistCirc_in=31; Diet_notes=Doesn't eat a lot of meat SUBJECT_SAMPLE_FACTORS cl cl-0004 Diet:Omnivore Time Point=0004; Age=29; Sex=M; Ht_in=70; Wt_lbs=156; BMI=22; WaistCirc_in=31; Diet_notes=Doesn't eat a lot of meat SUBJECT_SAMPLE_FACTORS cl cl-0018 Diet:Omnivore Time Point=0018; Age=29; Sex=M; Ht_in=70; Wt_lbs=156; BMI=22; WaistCirc_in=31; Diet_notes=Doesn't eat a lot of meat SUBJECT_SAMPLE_FACTORS cl cl-0068 Diet:Omnivore Time Point=0068; Age=29; Sex=M; Ht_in=70; Wt_lbs=156; BMI=22; WaistCirc_in=31; Diet_notes=Doesn't eat a lot of meat SUBJECT_SAMPLE_FACTORS cl cl-0134 Diet:Omnivore Time Point=0134; Age=29; Sex=M; Ht_in=70; Wt_lbs=156; BMI=22; WaistCirc_in=31; Diet_notes=Doesn't eat a lot of meat SUBJECT_SAMPLE_FACTORS cm cm-0001 Diet:Omnivore Time Point=0001; Age=22; Sex=M; Ht_in=72; Wt_lbs=181.6; BMI=24.1; WaistCirc_in=31.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS cm cm-0022 Diet:Omnivore Time Point=0022; Age=22; Sex=M; Ht_in=72; Wt_lbs=181.6; BMI=24.1; WaistCirc_in=31.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS cn cn-0002 Diet:Omnivore Time Point=0002; Age=34; Sex=F; Ht_in=68; Wt_lbs=157; BMI=23.6; WaistCirc_in=33; Diet_notes=- SUBJECT_SAMPLE_FACTORS cp cp-0001 Diet:Omnivore Time Point=0001; Age=26; Sex=M; Ht_in=74; Wt_lbs=182.6; BMI=23.2; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS cp cp-0009 Diet:Omnivore Time Point=0009; Age=26; Sex=M; Ht_in=74; Wt_lbs=182.6; BMI=23.2; WaistCirc_in=33.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS cq cq-0035 Diet:Omnivore Time Point=0035; Age=27; Sex=F; Ht_in=66; Wt_lbs=137; BMI=22; WaistCirc_in=29; Diet_notes=Doesn't eat a lot of meat SUBJECT_SAMPLE_FACTORS cr cr-0001 Diet:Omnivore Time Point=0001; Age=28; Sex=M; Ht_in=67; Wt_lbs=133; BMI=20.8; WaistCirc_in=26; Diet_notes=- SUBJECT_SAMPLE_FACTORS cs cs-0001 Diet:Omnivore Time Point=0001; Age=32; Sex=F; Ht_in=65; Wt_lbs=155; BMI=26; WaistCirc_in=32; Diet_notes=- SUBJECT_SAMPLE_FACTORS cs cs-0029 Diet:Omnivore Time Point=0029; Age=32; Sex=F; Ht_in=65; Wt_lbs=155; BMI=26; WaistCirc_in=32; Diet_notes=- SUBJECT_SAMPLE_FACTORS ct ct-0001 Diet:- Time Point=0001; Age=35; Sex=M; Ht_in=71; Wt_lbs=162.8; BMI=22.5; WaistCirc_in=33; Diet_notes=- SUBJECT_SAMPLE_FACTORS ct ct-0005 Diet:- Time Point=0005; Age=35; Sex=M; Ht_in=71; Wt_lbs=162.8; BMI=22.5; WaistCirc_in=33; Diet_notes=- SUBJECT_SAMPLE_FACTORS cu cu-0001 Diet:- Time Point=0001; Age=29; Sex=M; Ht_in=72; Wt_lbs=175.4; BMI=23.8; WaistCirc_in=35; Diet_notes=- SUBJECT_SAMPLE_FACTORS cu cu-0009 Diet:- Time Point=0009; Age=29; Sex=M; Ht_in=72; Wt_lbs=175.4; BMI=23.8; WaistCirc_in=35; Diet_notes=- SUBJECT_SAMPLE_FACTORS cv cv-0001 Diet:Omnivore Time Point=0001; Age=21; Sex=M; Ht_in=74; Wt_lbs=193; BMI=24.8; WaistCirc_in=34.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS cw cw-0001 Diet:Vegetarian Time Point=0001; Age=30; Sex=F; Ht_in=64; Wt_lbs=132; BMI=22.7; WaistCirc_in=29; Diet_notes=- SUBJECT_SAMPLE_FACTORS cw cw-0035 Diet:Vegetarian Time Point=0035; Age=30; Sex=F; Ht_in=64; Wt_lbs=132; BMI=22.7; WaistCirc_in=29; Diet_notes=- SUBJECT_SAMPLE_FACTORS cw cw-0053 Diet:Vegetarian Time Point=0053; Age=30; Sex=F; Ht_in=64; Wt_lbs=132; BMI=22.7; WaistCirc_in=29; Diet_notes=- SUBJECT_SAMPLE_FACTORS cy cy-0001 Diet:Vegetarian Time Point=0001; Age=45; Sex=F; Ht_in=71; Wt_lbs=161; BMI=22.4; WaistCirc_in=32; Diet_notes=- SUBJECT_SAMPLE_FACTORS cy cy-0019 Diet:Vegetarian Time Point=0019; Age=45; Sex=F; Ht_in=71; Wt_lbs=161; BMI=22.4; WaistCirc_in=32; Diet_notes=- SUBJECT_SAMPLE_FACTORS cy cy-0037 Diet:Vegetarian Time Point=0037; Age=45; Sex=F; Ht_in=71; Wt_lbs=161; BMI=22.4; WaistCirc_in=32; Diet_notes=- SUBJECT_SAMPLE_FACTORS cz cz-0001 Diet:Omnivore Time Point=0001; Age=21; Sex=M; Ht_in=74; Wt_lbs=184; BMI=23.5; WaistCirc_in=32.5; Diet_notes=avoids sugar SUBJECT_SAMPLE_FACTORS cz cz-0039 Diet:Omnivore Time Point=0039; Age=21; Sex=M; Ht_in=74; Wt_lbs=184; BMI=23.5; WaistCirc_in=32.5; Diet_notes=avoids sugar SUBJECT_SAMPLE_FACTORS da da-0001 Diet:Omnivore Time Point=0001; Age=23; Sex=M; Ht_in=67; Wt_lbs=167; BMI=25.6; WaistCirc_in=30; Diet_notes=- SUBJECT_SAMPLE_FACTORS da da-0044 Diet:Omnivore Time Point=0044; Age=23; Sex=M; Ht_in=67; Wt_lbs=167; BMI=25.6; WaistCirc_in=30; Diet_notes=- SUBJECT_SAMPLE_FACTORS db db-0001 Diet:Omnivore Time Point=0001; Age=19; Sex=M; Ht_in=68; Wt_lbs=157.2; BMI=23.5; WaistCirc_in=29; Diet_notes=Limits red meat SUBJECT_SAMPLE_FACTORS dc dc-0001 Diet:Omnivore Time Point=0001; Age=25; Sex=M; Ht_in=68; Wt_lbs=173; BMI=25.8; WaistCirc_in=31; Diet_notes=- SUBJECT_SAMPLE_FACTORS dc dc-0028 Diet:Omnivore Time Point=0028; Age=25; Sex=M; Ht_in=68; Wt_lbs=173; BMI=25.8; WaistCirc_in=31; Diet_notes=- SUBJECT_SAMPLE_FACTORS dd dd-0041 Diet:Vegetarian Time Point=0041; Age=33; Sex=F; Ht_in=68; Wt_lbs=134.8; BMI=20.3; WaistCirc_in=29.5; Diet_notes=Vegan SUBJECT_SAMPLE_FACTORS de de-0001 Diet:Omnivore Time Point=0001; Age=29; Sex=F; Ht_in=68; Wt_lbs=127; BMI=19.4; WaistCirc_in=27; Diet_notes=- SUBJECT_SAMPLE_FACTORS de de-0031 Diet:Omnivore Time Point=0031; Age=29; Sex=F; Ht_in=68; Wt_lbs=127; BMI=19.4; WaistCirc_in=27; Diet_notes=- SUBJECT_SAMPLE_FACTORS df df-0001 Diet:Omnivore Time Point=0001; Age=43; Sex=F; Ht_in=64; Wt_lbs=126; BMI=21.4; WaistCirc_in=25.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS df df-0030 Diet:Omnivore Time Point=0030; Age=43; Sex=F; Ht_in=64; Wt_lbs=126; BMI=21.4; WaistCirc_in=25.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS dg dg-0001 Diet:Omnivore Time Point=0001; Age=30; Sex=M; Ht_in=73; Wt_lbs=184; BMI=23.7; WaistCirc_in=32.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS dg dg-0008 Diet:Omnivore Time Point=0008; Age=30; Sex=M; Ht_in=73; Wt_lbs=184; BMI=23.7; WaistCirc_in=32.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS dh dh-0001 Diet:Omnivore Time Point=0001; Age=22; Sex=F; Ht_in=63; Wt_lbs=123.8; BMI=21.6; WaistCirc_in=25.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS dh dh-0010 Diet:Omnivore Time Point=0010; Age=22; Sex=F; Ht_in=63; Wt_lbs=123.8; BMI=21.6; WaistCirc_in=25.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS di di-0001 Diet:Omnivore Time Point=0001; Age=31; Sex=M; Ht_in=70; Wt_lbs=168; BMI=24; WaistCirc_in=29; Diet_notes=- SUBJECT_SAMPLE_FACTORS di di-0009 Diet:Omnivore Time Point=0009; Age=31; Sex=M; Ht_in=70; Wt_lbs=168; BMI=24; WaistCirc_in=29; Diet_notes=- SUBJECT_SAMPLE_FACTORS dj dj-0001 Diet:Vegetarian Time Point=0001; Age=19; Sex=M; Ht_in=68; Wt_lbs=169; BMI=25.3; WaistCirc_in=33; Diet_notes=- SUBJECT_SAMPLE_FACTORS dj dj-0016 Diet:Vegetarian Time Point=0016; Age=19; Sex=M; Ht_in=68; Wt_lbs=169; BMI=25.3; WaistCirc_in=33; Diet_notes=- SUBJECT_SAMPLE_FACTORS dk dk-0001 Diet:Omnivore Time Point=0001; Age=40; Sex=F; Ht_in=62; Wt_lbs=132.8; BMI=24.2; WaistCirc_in=27.5; Diet_notes=- SUBJECT_SAMPLE_FACTORS dk dk-0003 Diet:Omnivore Time Point=0003; Age=40; Sex=F; Ht_in=62; Wt_lbs=132.8; BMI=24.2; WaistCirc_in=27.5; Diet_notes=- #COLLECTION CO:COLLECTION_SUMMARY Stool samples were obtained from OpenBiome (https://www.openbiome.org/), a CO:COLLECTION_SUMMARY non-profit stool bank, under a protocol approved by the institutional review CO:COLLECTION_SUMMARY boards at MIT and the Broad Institute (IRB protocol ID #1603506899) CO:SAMPLE_TYPE Stool CO:STORAGE_CONDITIONS -80℃ #TREATMENT TR:TREATMENT_SUMMARY Subjects were healthy people screened by OpenBiome to minimize the potential for TR:TREATMENT_SUMMARY carrying pathogens, with ages between 19-45 years and with BMI between 17.5-29.8 TR:TREATMENT_SUMMARY at initial sampling. #SAMPLEPREP SP:SAMPLEPREP_SUMMARY Raw stool were diluted 1:10 in 12.5% glycerol buffer and 0.9% NaCl, homogenized SP:SAMPLEPREP_SUMMARY and filtered through a 330um filter. HILIC-pos: LC-MS samples were prepared from SP:SAMPLEPREP_SUMMARY homogenate(10 μL) via protein precipitation with the addition of nine volumes SP:SAMPLEPREP_SUMMARY of 74.9:24.9:0.2 v/v/v acetonitrile/methanol/formic acid containing stable SP:SAMPLEPREP_SUMMARY isotope-labeled internal standards (valine-d8, Isotec; and phenylalanine-d8, SP:SAMPLEPREP_SUMMARY Cambridge Isotope Laboratories; Andover, MA). The samples are centrifuged (10 SP:SAMPLEPREP_SUMMARY min, 9,000 x g, 4°C), and the supernatants were injected directly. HILIC-neg: SP:SAMPLEPREP_SUMMARY Stool homogenates (30μL) were extracted using 120 μL of 80% methanol (VWR) SP:SAMPLEPREP_SUMMARY containing 0.05 ng/μL inosine-15N4, 0.05 ng/μL thymine-d4, and 0.1 ng/μL SP:SAMPLEPREP_SUMMARY glycocholate-d4 as internal standards (Cambridge Isotope Laboratories). The SP:SAMPLEPREP_SUMMARY samples were centrifuged (10 min, 9,000 x g, 4ºC) and the supernatants (10 μL) SP:SAMPLEPREP_SUMMARY were injected directly. C18-neg: Stool homogenates (30 μL) were extracted using SP:SAMPLEPREP_SUMMARY 90 μL of methanol containing PGE2-d4 as an internal standard (Cayman Chemical SP:SAMPLEPREP_SUMMARY Co.; Ann Arbor, MI) and centrifuged (10 min, 9,000 x g, 4°C). C8-pos: Lipids SP:SAMPLEPREP_SUMMARY were extracted from homogenates (10 μL) using 190 μL of isopropanol containing SP:SAMPLEPREP_SUMMARY 1-dodecanoyl-2-tridecanoyl-sn-glycero-3-phosphocholine as an internal standard SP:SAMPLEPREP_SUMMARY (Avanti Polar Lipids; Alabaster, AL). After centrifugation (10 min, 9,000 x g, SP:SAMPLEPREP_SUMMARY ambient temperature), supernatants (10 μL) were injected directly #CHROMATOGRAPHY CH:CHROMATOGRAPHY_TYPE HILIC MS:INSTRUMENT_NAME Thermo Q Exactive Plus Orbitrap CH:COLUMN_NAME Phenomenex Luna NH2 (150 x 2mm) CH:SOLVENT_A 20 mM ammonium acetate and 20 mM ammonium hydroxide (Sigma-Aldrich) in water CH:SOLVENT_A (VWR) CH:SOLVENT_B 10 mM ammonium hydroxide in 75:25 v/v acetonitrile/methanol (VWR) #ANALYSIS AN:ANALYSIS_TYPE MS AN:OPERATOR_NAME Kerry Pierce #MS MS:INSTRUMENT_NAME Thermo Q Exactive Plus Orbitrap MS:INSTRUMENT_TYPE Orbitrap MS:MS_TYPE ESI MS:ION_MODE NEGATIVE MS:MS_COMMENTS Raw data were processed using TraceFinder 3.3 software (Thermo Fisher MS:MS_COMMENTS Scientific; Waltham, MA) and Progenesis QI (Nonlinear Dynamics; Newcastle upon MS:MS_COMMENTS Tyne, UK). Metabolite identities were confirmed using authentic reference MS:MS_COMMENTS standards or reference samples. MS:MS_RESULTS_FILE ST001192_AN001985_Results.txt UNITS:abundance Has m/z:Yes Has RT:Yes RT units:Minutes #MS_METABOLITE_DATA MS_METABOLITE_DATA:UNITS Abundance MS_METABOLITE_DATA_START Samples aa-0163 ab-0140 ac-0002 ad-0002 ad-0005 ae-0001 ae-0003 ae-0007 ae-0024 ae-0069 af-0003 af-0060 ag-0001 ag-0005 ah-0002 ah-0028 ai-0002 aj-0001 ak-0001 ak-0010 al-0002 am-0001 am-0003 am-0006 am-0014 am-0025 am-0052 am-0070 am-0111 am-0224 an-0001 an-0002 an-0004 an-0013 an-0025 an-0030 an-0082 ao-0001 ao-0004 ao-0025 ao-0049 ao-0085 ao-0090 ap-0001 ap-0037 aq-0004 aq-0015 ar-0039 as-0033 at-0004 at-0044 au-0002 av-0006 av-0107 aw-0001 aw-0036 ax-0001 ax-0090 ay-0001 az-0001 ba-0001 ba-0003 ba-0010 ba-0018 ba-0025 ba-0066 ba-0113 bc-0002 bc-0003 bc-0013 bc-0018 bc-0029 bc-0042 bc-0068 bc-0105 bd-0033 be-0001 bf-0003 bf-0108 bh-0001 bh-0003 bh-0012 bh-0025 bh-0050 bh-0066 bh-0087 bh-0123 bi-0001 bi-0026 bj-0001 bj-0004 bj-0014 bj-0032 bj-0056 bj-0095 bj-0110 bk-0002 bl-0009 bm-0002 bm-0013 bn-0002 bn-0038 bo-0001 bo-0122 bp-0002 bq-0002 bq-0068 br-0002 bs-0008 bt-0001 bt-0039 bu-0001 bu-0080 bv-0001 bw-0001 bw-0033 bx-0001 bx-0057 by-0002 bz-0033 ca-0001 ca-0012 cb-0001 cb-0051 cc-0002 cd-0050 ce-0001 ce-0007 cf-0001 cf-0037 cg-0001 ch-0008 cj-0004 cl-0001 cl-0004 cl-0018 cl-0068 cl-0134 cm-0001 cm-0022 cn-0002 cp-0001 cp-0009 cq-0035 cr-0001 cs-0001 cs-0029 ct-0001 ct-0005 cu-0001 cu-0009 cv-0001 cw-0001 cw-0035 cw-0053 cy-0001 cy-0019 cy-0037 cz-0001 cz-0039 da-0001 da-0044 db-0001 dc-0001 dc-0028 dd-0041 de-0001 de-0031 df-0001 df-0030 dg-0001 dg-0008 dh-0001 dh-0010 di-0001 di-0009 dj-0001 dj-0016 dk-0001 dk-0003 Factors Diet:- Diet:- Diet:- Diet:- Diet:- Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:Omnivore Diet:Omnivore Diet:Vegetarian Diet:Vegetarian Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Vegetarian Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:- Diet:Omnivore Diet:Omnivore Diet:- Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:- Diet:- Diet:Omnivore Diet:Omnivore Diet:- Diet:- Diet:- Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:- Diet:- Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:- Diet:- Diet:- Diet:- Diet:Omnivore Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:Vegetarian Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Vegetarian Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Omnivore Diet:Vegetarian Diet:Vegetarian Diet:Omnivore Diet:Omnivore glycocholate-d4 5929344 5897365 5260472 6285605 7256974 6870532 5248800 6948110 2058181 5597791 6627615 7253388 6977236 6329279 4373386 6404939 7108931 4797894 4465860 5218482 5879870 5560099 5343556 6532930 5922627 4716214 5916367 6015799 5092744 5165301 6377278 6419987 7346609 6812413 6386761 7039371 6556047 6182060 2461237 5695153 5934939 6628403 5827706 5090973 6257490 6194586 6013908 5890297 6839670 7592102 7705683 4610737 6808019 6588047 6149036 6252884 7407983 7261520 7141061 6862959 6773746 7368528 6708460 3736246 6883307 7004491 7619805 5936120 6403646 5765838 5221732 5265834 5465367 6202430 5420587 5859950 6616518 6251361 5737638 5973316 5884583 5540202 5573872 6143648 5663602 6067448 5971241 6351246 6215426 6361610 6326420 6053147 6225942 6239730 6243797 6248131 6694666 6876991 6535741 6161709 6304747 5913655 6519157 5842178 5970333 5682155 5809748 6773872 6765813 7338592 7224810 6445464 6458116 5856677 6765131 6496275 6059827 5292166 5098069 5339928 7240497 7310654 6619667 5549717 6415957 7360464 6454207 4698190 6258493 5526316 6163124 5828291 6658328 6248367 4720388 5665134 6556137 6399327 7124385 6114370 6078423 5917462 6693623 5582370 6814347 6500422 6859470 5799866 6389050 5809481 5506065 6470832 5449911 4886683 5349046 6826104 6471816 6860127 6785035 7264677 6337076 5942799 5922423 5919615 2453911 5609898 6219414 6458858 8764142 7367871 6754384 6985646 6086446 6814982 6884543 7533821 6542444 7007018 6503073 6110315 thymine-d4 64564945 62253602 56171480 66262050 73371960 72181690 73086192 75412801 61531322 74179792 62544736 88970823 70958557 66861465 72443709 66711102 71221207 73519511 68867740 64259048 67747427 74472601 70163375 74085617 73272899 62277585 69078679 62632982 55886251 53532775 74137062 77083660 73834679 80728069 80807005 79143662 59620505 83330681 68625016 82995295 84291758 95250423 79655080 61016985 60545782 85257583 65149711 103105215 75765171 76174560 79799852 64024231 68624553 60641928 75934006 63093416 66998061 63133891 82004955 74498392 83544486 80692553 82217914 80178111 77366527 61496619 70283951 79381874 76599395 84344433 77967576 72631489 68528264 65658004 69210090 64653781 67045775 59953671 54033901 69762001 75423981 70539906 62445206 67105970 56934709 62351564 62583872 75423159 63996468 75437345 67866842 66461442 67514683 63068645 57091714 67397555 69982035 65626022 64075746 60927099 64201828 53713198 69590802 58902236 64942026 66773629 61619373 66436049 68951452 63544512 66228135 58972414 62558092 62157925 60752790 58588623 60406604 59460541 60832736 68619839 41301852 66657899 60931401 59989559 66307170 67688160 60015040 58799901 71358562 69240311 59731643 62465279 58577654 57075435 47679958 58395363 62434592 67790421 63747707 61495527 58636441 59909707 64916228 77924333 63368759 61627986 59228275 57470540 63424212 55824467 51556298 62660850 93198242 86302335 88297726 62551563 65286702 64525138 66351485 66244023 66777893 64056818 52383286 65200470 64202027 52903869 61291824 61625265 66866295 58108612 64495958 63350610 61546955 64473461 64894245 60482042 66879223 65873694 52687536 54949507 2-aminoadipate 2658543 995266 696409 882546 745583 605318 613330 754430 1555085 596002 2197019 525794 1561961 1625082 166089 236790 2055351 526611 237578 653590 704216 336676 460800 989523 633262 1074568 759796 1408516 1485614 705684 407741 142270 280447 374496 293777 894762 182212 214704 144639 648461 504660 994189 277433 720932 234750 1220862 832946 407540 1024969 142296 150639 212637 516875 878729 212883 190563 523929 452907 559633 50343 397462 1034078 981098 167651 736725 1023744 370977 410403 839197 712892 739423 1248826 224867 146108 139087 188630 151301 1439463 1168756 230359 81996 205406 100359 119196 187189 348468 306949 143811 824223 2377838 1726395 1028100 843325 232869 561772 202594 604879 505218 175030 154319 247161 460717 501995 539871 269219 135351 721415 658636 1722261 543758 198827 553004 443319 404521 340278 216692 971589 162500 344967 1054737 337187 380920 206287 185693 563450 120934 463441 464517 753220 953573 917236 1174369 201362 1029355 908868 100002 304385 227820 287749 344619 376743 801070 943055 1117897 289752 301964 549001 374291 163674 288774 531808 211032 275465 717722 161722 588828 511543 2-furoylglycine 448600 2252763 2222076 2163110 1098544 96087 172641 171424 321464 706836 2468346 892762 1317193 484437 857506 693214 864170 2018706 1082839 673788 495280 387143 226753 566927 446181 729367 924824 1561458 506694 522321 1972339 214260 387733 727692 759248 218882 514333 341476 1308975 1055364 279762 405562 717674 309117 612944 676483 331300 2060697 561595 263084 2457837 873237 351036 809194 2013571 831590 1833759 1936602 1836249 1802967 1929961 2051004 2516102 1437797 1582273 487526 294540 361592 299395 747370 468479 329205 131623 412659 455262 996138 666604 834026 1417215 2342583 1431235 1272724 758058 1075607 739572 462165 1074223 104296 600030 814536 969873 1371886 1698385 1335716 565618 1710853 100408 1655093 424714 555444 982442 887612 169771 1436059 2148381 895960 434132 1905406 607815 656493 389362 826139 677117 734659 1138971 1040878 1347477 1644727 1483409 1488670 1975560 893227 1681226 1822939 405922 266398 1312928 561449 1827963 279841 442714 420208 221836 889029 1223847 808173 867135 682368 511438 1543850 1329579 2110598 1013450 123312 258410 514880 689766 920102 2-hydroxyglutarate 19722832 40227922 23969625 29669786 35256449 38950247 24766848 33027826 24585939 34018749 23760350 9491161 19946972 18476850 4244703 11448450 20833017 59719627 146113951 70847922 72177655 90770836 152695984 43335556 69106160 61129874 116017329 51936030 28276843 35039824 54311631 115175266 22436110 130052877 27712005 29989868 60030183 128349987 191916146 65414467 71718480 43926906 197803563 11401139 13833991 22822942 19788645 17417209 9141380 65956803 35969609 27834876 31790937 35722416 11938334 8903973 43632226 52736368 28774253 15233928 15317741 58611985 12765052 11937879 29536375 50227125 14310780 34746533 33402388 29153377 23059172 31287576 37674324 52517195 100139200 30145051 46226413 14134860 49054218 18471811 28892535 31515759 21086966 34335057 18793450 19559196 15227067 49038121 46709458 11970723 16127571 27360185 21345921 12658656 19602436 20931521 33516126 45753359 19542288 22488552 15643698 46587956 38525716 65906217 41020344 32291054 6686817 19975865 15721144 20338723 36789602 74898362 63904840 25577304 23174289 30440338 18306521 13682112 37006547 24856509 13204753 10063370 10556811 25674995 6695440 24994748 100404172 31657918 11438280 5830810 33758540 45262692 29822157 46219196 97079744 20056059 32805406 17333017 24949822 25944754 10679462 28166069 28480896 47957481 108984796 47218998 27751131 35265511 33051967 44309724 43940385 8953598 6064480 5893518 8824910 21228311 14271705 27548858 14664792 18510279 24384080 71405944 175569554 22526914 33687848 34109844 28818428 36285834 20403454 14828326 31229358 63975717 25992204 11099979 17387946 29504210 11555161 20935291 23484741 54291809 3-4-dihydroxybenzylamine 1333148 2025975 2809570 14481569 1104464 2063683 3186648 1684551 917390 1828312 760377 5345336 1097632 1459846 4930652 2714817 1358334 1526430 1356245 4166862 2287057 1066060 1125822 1206051 4577928 1911482 788163 1422556 423601 772182 3374601 1645801 2341989 379672 4301001 881338 379219 302436 312862 1423949 1072690 1005424 1278478 1450073 1420736 3792372 693867 1491923 642655 1047190 1289928 926020 727307 1310059 974257 2216899 1280306 2482371 722852 2341051 699260 571919 8603519 437349 1705539 1444568 578872 4336367 1143039 541850 1176815 1366683 2904789 1122476 3388880 1613930 1692426 870601 515415 882107 2883379 3114875 1268768 829975 764989 2792782 1173705 1017705 1164685 1327650 1471394 1257713 907877 1167455 1186034 2784194 1828551 1584641 1919377 2721748 9975100 573782 207650 875130 3863599 2135968 1054650 1570256 758279 1669199 8309929 1560541 1804757 3-4-dihydroxyphenylglycol 3348677 1824509 6220328 5000223 10047924 1060040 1640543 5398632 4722508 3455441 7520040 15031498 3473135 6109451 4608908 3276991 5252873 2353993 3671346 3258754 2283019 2090080 2556147 2313422 1701970 7868427 3784789 1167901 7965960 951046 3846157 1121224 3780124 6818567 1578014 2360100 2694079 1868711 1032019 2450865 7116206 3092695 2992530 2743529 2956835 2497556 2331757 2810391 3840981 6150445 1980976 2030153 9515015 2581109 1413255 3478016 1284869 682263 2055377 2423563 3116597 7842992 1878652 5666463 2631398 2153669 1329702 1266054 1017008 1519455 433759 4407253 2706620 2499969 3066805 2245087 2385383 788248 1786938 4462425 2610834 2267828 7534513 3728592 5107924 3479731 9994515 4743197 3387940 1705124 1672387 3006326 984770 1122657 616082 3522536 696636 669537 2879541 2129886 1854015 2449624 1321623 1215947 12417095 3950776 590975 2518511 1692331 2543783 3781513 5863287 2083528 1955846 2146136 3336507 3320613 3380366 2285470 15464773 2415630 3445463 2933799 3248995 3-hydroxykynurenate 1545373 2564799 1767743 2847038 837717 169820 59604 286770 286899 256544 1015312 103687 797527 1904015 754786 1214588 787440 133401 1170177 1091148 812501 546387 277473 134023 126031 445795 771315 589888 632928 1709931 1782465 1965638 941626 471479 234343 285731 197006 124054 48521 80169 206427 762754 747966 307858 536152 319547 336924 566789 562765 274498 2860892 1109599 481126 1029536 381048 172081 56004 3085024 4002155 248153 53846 34791 140861 248283 375104 29833 185372 1858338 2587701 1674787 2656484 1399394 2103998 2228131 2883586 2802984 2232982 2394396 1642144 584400 1708237 563900 184228 430538 270966 270561 290945 169721 951162 2529957 996729 1363043 1070979 3475077 1058449 959751 737650 1266307 92046 520409 308373 442144 631176 485079 985607 1920141 396508 402499 1000025 152297 1794728 243630 414828 966436 268670 809848 196621 975973 125850 87773 1962112 2374143 788752 391912 1641184 417304 667634 127498 1050007 517541 1163768 1696701 2096823 1967459 3499563 1226554 1972095 2047076 919937 2191873 3672914 613484 147432 1132971 536757 2391440 795217 288480 1324146 614508 43939 165760 570068 1990811 387966 1209138 1621946 596642 1221365 2010191 513729 1928247 530646 279426 817284 1637286 6657103 391609 1206567 3-methyladipate/pimelate 44976267 60775113 112741460 85051918 75846698 17075697 16689185 17291086 34219126 26016369 23728279 7806530 27736941 27363695 30628485 48925940 38586874 14910453 10572312 9067504 27353199 16645411 22153765 25279427 15086097 18512047 21103403 36769777 28341892 31828464 21180546 14243421 27567198 9628108 19708401 21212019 19452757 8357477 26682606 11238596 8592559 4911503 17650922 21273504 25815138 12040210 35149960 31121265 14765972 16117814 10445741 30798925 26142629 15823851 9307691 32669875 16319183 25799979 8319460 23971162 12692530 22210229 8266650 9648338 14829720 17349786 14637198 8999823 15927299 7386292 9219656 23974574 11068949 12704826 21632746 26672563 48492925 15351137 15403756 51265827 43665921 83561695 63741215 69313699 69577703 82877641 93954901 18882372 14133930 33306193 25490440 28855131 30430897 24308957 29465375 27131304 17267208 20899946 37395384 66430354 29273716 40175076 24688546 44431513 32443846 11220794 26674817 41482623 9886815 17411244 29096991 48368166 42305368 15608881 33084194 60409949 88247585 71050037 18504181 18270223 23760176 16504926 31969591 31589224 16047106 12722420 19027560 31471185 13069588 10544692 86786439 61141499 62045616 20358834 46463381 19277518 25378994 13952800 18114228 30599550 23988714 71535776 67999249 25936241 24641390 33162611 30538213 37428159 27660013 90483993 90904085 28770747 12075545 18775870 24691966 41848282 28649355 36272291 47006124 40777365 8967232 9060297 51043977 63910998 27788425 35458598 25118935 25051837 27566960 22591198 28069442 42281229 10276899 8529356 18029704 28124784 7814083 11185067 38129413 35661984 4-hydroxybenzaldehyde 8076186 11005891 18901214 9547957 6031102 7204623 8832085 13565799 6382625 5007992 6299135 2148887 13195571 17409770 12485819 11082853 6332276 8748821 13777435 8899848 8451076 8171996 16819396 9730974 6010325 8820375 14251781 15198553 12429404 5248628 5309059 4399054 8793099 2983121 3471615 4610499 5827711 6852806 11014976 3685609 4981824 3250456 3298717 3889407 5580869 2453543 7212547 4098723 4208634 6558847 4803586 7126012 6721693 5641164 2251141 5373230 5713367 3637273 3779580 4586857 4945259 8955997 5173830 1023334 6321592 10239083 7583986 5844301 6109163 3296876 5075571 7646821 3805208 4534855 16691391 3789669 9252917 5323366 6149301 9276031 3069886 3675594 3835813 4871940 4645724 2625235 5174892 3818175 4858494 5076778 3731972 5108661 4951838 3907545 3767386 7584312 4024665 9187790 4112384 6587177 4999498 4497282 6702952 3704403 7503684 2342823 2091667 10189081 2329484 4596598 5010716 10433932 13953822 5925385 3652618 5756795 4814376 5350409 5338013 2927041 5664458 7383738 4672325 6541058 2219471 3776870 7599967 7765698 7276836 1367557 6147146 10376912 5418638 6909916 9400756 4227520 5516274 3315725 3709206 5658495 4568134 5298321 4469359 6154836 6305900 4447024 4560088 4938558 3174489 6038351 4426938 4277377 1607651 2715812 4073643 3796504 3733184 3777767 6223711 5639751 2217350 4477726 3497210 5235049 6367640 3924941 5827689 9593456 5338113 275407 4364412 5599719 5361215 4433529 3055772 6065564 2542274 4895638 4808706 4158104 4-hydroxybenzeneacetonitrile 402738 700266 2507608 578657 649488 156144 475733 2070788 1736673 328228 123330 281605 476061 241487 264226 275787 429166 179099 103994 323406 103456 359836 443898 32678 354079 186226 796417 443707 85420 568779 641626 945040 280366 115781 505683 436664 496805 269199 524769 285142 218148 258320 526083 303714 542761 109532 267706 750938 464360 89462 362612 69110 200349 1045454 1074500 970912 571808 358506 451453 196952 293674 161685 464695 919614 995524 623813 816586 174812 244105 670508 163564 254537 164591 822519 729284 292432 360924 785293 918461 82759 156497 223357 256689 844051 510747 426061 301437 81675 259771 273334 147711 307758 275441 478771 483968 967253 4-pyridoxate 43425793 37189944 111742487 3003538 2040145 19160584 21730157 15429503 63988309 19504172 78980423 13649158 24162217 24347677 9552450 4330136 39945715 23657293 10891456 12928141 16680315 16262015 31430778 18735862 26534532 44701262 21142751 87483095 73693673 30902687 15324572 7215306 69202169 9719876 22024343 21131608 42293431 8400819 37895520 11089218 5184782 2839060 12168496 26073539 20796592 4999757 16252718 28203127 7542584 21002833 17215762 47865422 25012953 11672948 7115992 9656948 18256039 8521018 20021408 24740468 8434906 33389567 10546830 4345843 20048335 29985461 10737326 5829224 11920620 4777107 11124472 20215077 6476077 10095865 21354057 14038554 19960434 30544758 21877786 32421152 11732210 9317360 15941666 10476684 11535168 9014077 30650069 14278186 11472849 32588421 31673996 58247748 28650174 34333235 40771321 31513332 12258951 15001022 12150389 57429083 24664126 22975171 19644958 37205101 50333876 4146955 31714128 23922612 10373729 22290678 12852492 16309187 16377326 11920910 21047914 55788383 33954010 38757387 25651684 25828597 88130534 42135936 21621991 19490200 15122105 14034146 8348546 17917634 11749505 6335506 22768576 37449612 17774095 27010892 74361897 21928559 22800563 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100283528 40603437 106202167 64873772 105381025 90325599 73994610 75145272 149397001 61242918 96499812 139029779 93096201 204522944 333319849 286439975 157287799 359626834 187646132 396073861 331019939 113328986 109454433 119425175 123521514 132938916 100590073 71137435 115247374 176105993 52393941 46188037 54029806 56509607 24473467 171560472 111117964 353086649 84441491 73646541 112600064 80923985 46300069 84854641 119130719 487299289 303219208 54354637 123775904 224995786 110468187 160998925 88460154 67454636 104684019 142556827 60327514 196204615 33288055 198084045 102128991 188530268 50873611 35868063 191707919 112562380 95113459 123693011 233872200 66487595 232975871 55899911 72518493 149566290 91196323 79106340 109881147 62727283 127192244 113554208 323665243 136823788 168629012 392562334 357797309 46298546 94793626 87856848 215584302 75822795 98401853 155057632 88912010 93011077 100951701 56233207 770284885 145544906 131148255 208836269 47092915 111671270 145203261 52861193 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37646514 38451847 13756217 17959944 46775062 27584132 27155624 28704095 80204977 38816805 33614980 38376771 18900795 28678872 9053001 16157858 22042935 26436976 11132415 75851757 7110396 9154965 5335143 27060663 16837327 25738469 22006986 64404458 50706541 36026207 19494227 9836113 63687868 28682558 10684722 41802803 111189355 41017912 21856859 36350754 59197769 16763246 20497625 4832084 10307126 20835037 37398381 14750148 13406110 17982614 6002121 8465295 31327054 15632050 13476148 31531764 35813828 36015456 21109918 21978776 22918957 45372897 44090982 37222656 25351935 27798243 30393934 46234555 27335673 28007276 82977407 37066666 35819104 32410144 22803122 16495856 31367802 27130949 17314096 30782768 61456772 16998006 51500811 28857222 81223982 38370154 8352381 17756709 36089993 14339790 31932240 24533476 77746539 51351804 22872815 60617416 60184228 51374650 40573196 15820795 17272622 52057650 64214724 57441767 50964233 6372015 19325623 43986556 85633822 17999944 6936010 62503039 107042290 59837806 26608757 156561998 25613187 26927575 16882642 16480436 64550589 38717088 40935556 56745369 61366137 37788153 44903513 74137809 57633633 43746402 59504619 51640180 61872335 7174135 27089364 25109471 26282418 8045549 13901772 32852968 29432554 4586251 18996325 87419111 17197499 104596030 113432347 26667774 11559648 21420926 21017435 36428841 46951536 16125981 6184048 29043729 70547770 5385144 7070879 142696465 77481775 tryptophan 1647156 4412760 3963253 2802074 1896590 2735867 8984578 2939822 5901895 2493369 1717154 284212 2081116 2521883 239254 828278 2026241 1345774 1786084 2991454 2727767 1246895 2273728 3654940 1443226 4423310 8069113 4878999 2247895 3537624 1104687 480037 2041752 378209 1341471 1396463 375613 6268463 429824 3895300 948705 779247 2194716 205975 4274061 912313 3045530 1783464 3055171 1673392 1360960 827252 181096 732947 2111576 336710 1289880 384933 1000582 2295767 435050 445986 1771240 3401627 1980087 777469 2218065 371282 355310 2542353 1102220 2335678 6332973 1116842 3642591 3619053 3034736 1019442 1461336 742055 847204 861793 323390 592721 342444 2500018 1849810 1483440 529533 1762011 1617970 311707 113008 1636504 1388561 1705978 891007 2685935 186058 1100134 1190577 1821766 5185203 435417 1735335 1163762 249112 1268352 1664037 2942165 2659173 3603115 413639 948006 1173368 667018 3866386 805783 1797762 1635522 333791 1575910 1250421 774576 1297972 162481 1250551 4235301 988408 1308952 9215542 975065 1092617 1207460 1519689 1677120 162507 451845 2744465 2281958 1113351 1204331 2007532 1536550 2226196 3003317 444567 874031 1038698 720327 510829 641011 926317 2065226 1005165 4121518 633494 4862173 806467 2569942 1808269 1014785 600486 1026771 967840 4820820 551683 935548 1772550 2011765 3263480 828060 tyrosine 8002990 8714589 11236512 7531564 4949419 6264081 6589356 8076808 7800093 4943546 4546155 894209 10419507 23732685 1443124 3453648 6428704 5581865 3731293 21606604 8078545 5743430 10799228 13416451 6972890 23502098 19214424 39108006 19921632 10522301 3057717 1669126 4826545 755241 2883841 4092937 4478176 2041307 13023228 1591495 7872411 1638679 3332323 2857626 4787870 1438573 8163660 2819981 1606448 8007681 5879943 17926140 5583355 2479486 1290500 4329842 3044886 1009084 3687457 2864042 2759687 7639489 2856051 1981811 4653832 10855517 6100910 3473896 7093510 1646311 4356967 8199389 3159971 5200094 16529153 3274844 4587222 3710229 10568555 4846660 4652951 3786167 3476747 3087151 2666201 3479605 3256915 7344380 6506197 4542153 2073923 4920517 5246492 2132890 1135157 4676433 2043777 4551463 2454445 5855500 1619842 3095059 2733399 5200180 6952350 569506 3664502 5882105 1089153 2548864 2626243 5115928 6396999 8206081 2159669 3650021 3855412 3365352 6416193 3059298 10648324 5132117 2298533 2013015 986948 4385017 7914634 3271561 1026091 3537322 8238359 3834456 2546689 16934805 2286352 3514004 1126613 2150410 12140271 4646105 2375774 2847496 6182571 4383323 5178433 4404495 5227700 4313996 5174756 6185616 2537295 718882 4227715 4122395 2817186 607002 1454667 2294687 2967008 1992731 4592061 9252269 2489605 24755054 3805137 6422091 4863291 13564395 16347833 2649890 2816426 25905562 2340436 3276666 5370568 612592 3770087 9326480 6194941 uracil 122961576 370001590 260535591 110195873 128076415 247550219 98235049 201082746 214981663 168891454 109727892 24958602 184363097 216666551 86380689 94928595 159985539 206966737 168205848 124594370 247275692 124592798 183727076 383150471 268563584 216872531 219269364 549823095 180957588 219737960 131042678 111524422 33900511 31813590 68017807 163070028 143514183 96546702 630721533 62959115 67461963 39655382 151135454 75848859 118622033 37243775 162645644 170441523 48584742 114255779 36710040 280880003 150207053 57996835 35437522 60200646 134674568 52362192 126801937 104891378 53518816 116442046 37465772 40685828 98016614 129665242 81782329 71527814 103421124 50075020 68550027 100138593 67643737 86169320 177687206 81303138 162833805 112900721 121129054 147990097 196005836 152068429 70643522 93076448 73416678 111138173 132397804 135658585 76955781 138947130 80769410 187370255 127475848 39198657 36506963 146954667 78122784 72507625 69306788 116051826 48967320 191284077 76846824 287125504 307492700 46934519 60623236 92090043 20450191 106915284 94075323 235725371 231044679 44715158 89437729 138933787 148208743 162476178 79379429 61724537 70494083 127844378 119499897 160525523 32900757 89870195 154454741 163022642 29263067 10395226 135658910 362624484 80876205 125728183 635805941 47537371 95669351 26597756 73190669 208873814 128063590 42735256 69794323 263610753 143216083 126135704 137044461 119285067 115076087 143284946 186936494 82535303 21794198 59874606 130215716 70979026 30199974 61351180 91783669 69299699 32316673 90860578 387150439 69569636 762456559 168728108 185385458 74987654 127873878 105701877 103274343 175529042 112425364 34174205 101950246 190499303 24437051 58872702 320654355 172907078 urate 14064904 7613655 243539584 37416448 35346388 10626745 5247232 16124045 16458221 22018815 136728841 3999384 16680156 9910275 1569246 12990538 19892851 17593264 6414921 19560003 9434251 7389300 4110224 24379036 17793400 12734149 16309100 19451122 20360163 51446492 7736415 4896016 26995683 1306477 11985706 6514441 17155322 8973167 81925122 3658444 9172253 1439865 41857932 14198864 20120440 15894142 17626648 23191917 4134867 12701546 42561815 8838525 18461436 4500464 4297892 9391833 14645435 7478597 9896759 16923469 6425761 14703397 2992553 394285 13627685 20732208 9607635 7763958 20585461 1572987 1983701 24164522 4927297 10613979 29643044 19038428 21569198 6699702 38704174 4505181 26802385 28905814 8564437 17826119 13930734 23462068 10954270 15998898 8885762 33157617 11004537 37685919 30368029 14418015 6872420 19291743 5704686 9805829 10687421 50872203 16984633 52756879 23656241 74808918 10656386 3694359 4790882 9062223 6858469 13762299 10765394 48182594 36430665 10565989 16393207 36563071 28795847 12589169 30315937 9112981 24992939 36933987 15212493 16433019 5484490 8963167 7728663 18516559 3962841 901958 45879833 7641766 53435847 30545255 46745110 17360796 43825191 14798681 5962978 17232831 19966688 20855262 60565242 59929137 62988539 45261151 37617889 20946656 25490894 54329959 49892204 6575228 1727206 10964786 15192620 11461415 3773015 8694968 17774773 11350451 7830648 3038686 38153884 16682244 6420883 32938601 8712685 11480769 3782971 6825556 8540479 30035079 8051670 2634871 17048165 44959416 1902940 7755550 81446480 59198663 uridine 89209446 170033914 47408284 60080215 63240096 90356684 124234264 84411022 83804337 78726399 67941397 57179385 45072596 56609387 33400509 22078491 81530353 70919716 66636919 98459712 177244063 180914401 202895675 145018764 153421697 122079280 119548720 129581879 90972556 135751009 90169634 93477475 118858040 62345880 86200864 80417244 85610888 142856049 96342539 112711636 99259565 76584365 105295710 43851409 49162339 75451622 64536235 30024689 69038799 105513297 85067292 163710787 173896061 91919413 29006029 55211312 196824280 103512535 75247060 43158799 53524579 37204811 48131111 61395574 67725651 39476843 93960320 73302669 66869561 51858732 50350229 88311147 61521923 72419791 123917585 35468296 89016118 110669492 95344888 97408968 107393715 71558758 40014746 79852734 35827783 60593225 40212731 93533171 60199079 73503963 52743633 93571269 69168965 47924882 81770452 97755092 90469968 68107197 81740260 102937718 33662232 53063286 43791003 88281038 179360612 42332367 74021147 54867484 33760472 45223550 89677641 75582200 130226766 52261867 37132031 49283652 62702613 109538757 67467477 61790600 68432036 175573664 30772519 50286166 31525163 123059615 84845988 70718355 54732493 31625244 63812764 171633521 34740149 73432723 86999997 59235889 74051298 33231872 74816574 110844749 105606382 57212854 65051385 83634312 113649105 22720922 36825347 82395902 72521161 41056229 52467403 75603529 34292633 66838448 53445469 60376607 48261903 86011847 67139884 59520525 89653253 127943397 113431526 60916464 406619219 46962913 119944881 87735790 86589890 87485710 75586411 92711957 110240104 55576918 126614006 103989517 56662998 73681493 41354959 75639794 xanthine 80820048 188121472 309339144 105760455 115240362 154678372 38379169 128885752 155749383 110697676 170266975 14409685 130441384 143700594 34586965 68368801 148945118 192685480 56432263 79457843 138030081 55411764 79695389 247756048 170638035 124986020 159712000 245109876 135903422 118803293 62033610 53000046 13564760 6132147 15829613 60377633 137313914 58425389 347740703 19404208 39628549 6166102 99680287 27132127 100877871 18405678 132564981 82763782 44937323 36921876 17801828 57090004 119079685 26354831 21346982 44293794 73436938 39437905 34781644 62043068 24557799 54214170 10671924 5412448 54366943 71051542 61081843 33228008 59998174 8672463 11322189 54817861 41210698 60964494 86608880 57290970 91441659 46685848 64052538 97892009 101296479 85509951 65580881 62198793 62403759 90079582 101797081 67339409 39650439 131299815 56139551 169394378 102083085 36554786 24353075 117070522 48251596 38240932 48756115 124085251 41185430 148115532 80546532 276657924 247696911 21532200 43377695 43882903 14439009 66554253 64132434 210002162 168377780 33278995 74822224 100019259 144654507 118301358 90996609 45275457 127335659 73108603 107840671 105186063 35198970 47287126 57141739 133561140 13692420 2271149 119671311 187435328 95421182 118633676 587354638 37999141 94111964 22889353 69600843 142998770 110484149 35589767 106329664 162176620 110862270 140967775 107387241 91935736 106057730 98151961 243270025 73687082 7109953 23216950 52364013 49834514 15996936 40523207 91377895 68058320 14302257 26456628 342534256 36081476 78088503 149738591 104637773 48643639 54274846 35078502 44285365 109335433 80725293 9966057 89997708 187932073 3279275 30499581 303754861 168534488 xanthurenate 1107867 1917778 367265 618643 717526 1459078 3555081 1429443 235100 362564 807932 132090 276598 620246 630235 218106 527916 268106 755379 1173918 1626133 2906476 1408011 1817612 1673048 702018 3419160 7798184 4355206 2976849 1746852 5475221 230145 137358 155671 313133 490765 1149798 1038360 1792282 4392761 3501169 2199070 2923347 1407430 1733641 3777358 3754452 1967577 488370 913014 306093 543460 896250 3284303 3520535 1769817 363909 336256 749845 275538 581045 1323150 1022732 656117 237761 3507931 5187594 369130 1684247 1494797 1139010 1405262 2731772 2534880 6724792 5003273 2966252 5165818 956858 3356097 3064884 1483209 304311 329404 1836463 889099 5280020 10248771 4467064 3897015 1747852 1049650 852680 375014 890611 5860267 720421 416939 2464993 854724 3739134 1999939 3248494 1409565 3037214 729189 2238850 2739469 1476457 369896 2982032 418249 1212683 1822983 455007 431984 507519 1356240 1550997 1011125 xylose 10945685 28630501 16568568 5827972 8182119 23310894 8866608 17455531 34956458 15356071 6850388 1174058 13442212 17136328 8873946 6920641 11611771 20033426 10468273 12287840 21536574 15265592 17595714 23969087 19373654 18763740 16737424 24739679 17169219 21877769 10727177 12434113 6440232 3310990 8450296 15615584 15099112 10864815 45518305 7631553 4204441 10009849 5642194 9693852 3531400 16086551 11092007 4504477 9648231 6166989 16414607 13182159 11073249 2413364 8285390 14440730 5591020 6715231 10579639 3787945 10946410 4601391 4338095 8049630 13636106 8900433 7592733 7277399 3533055 3453181 9521978 8774659 10440421 14030850 6302707 9993356 11098767 15036536 12576296 15953068 12401064 9599742 11408080 8402709 10532460 12718327 13214615 9084290 10179949 7265803 20515114 10990288 3638020 4895222 15061557 10618398 11278915 10389309 11359548 6605946 12550363 9997233 19167204 25608242 6157212 6297471 10742002 3089889 11081053 8039557 18758799 14494532 7989585 11259277 9774098 14338259 12060988 10252021 6441176 6411925 7232977 7543186 11386397 4728996 10126484 7770310 10781502 4006358 2978943 7755768 29528712 9433440 11959598 30453758 5683801 10880168 3226330 9989796 15219736 8760552 4060530 7021500 11057464 10117923 13890244 10913680 9970233 11181787 11931036 18551028 5445544 3861111 8598789 11395360 6565416 4719425 7703023 8144555 6438050 8118755 10813151 27106299 6680603 10039646 9678803 19082514 8002248 8696323 7599805 9868393 12410741 13662236 4140356 7649430 10276943 4073276 4562680 14209909 12321752 MS_METABOLITE_DATA_END #METABOLITES METABOLITES_START metabolite_name Compound ID m/z Retention times HMDB ID (*representative) glycocholate-d4 cmp.TF86 468.3269 3.90 Internal Standard thymine-d4 cmp.TF166 129.0608 1.35 Internal Standard 2-aminoadipate cmp.TF1 160.0615 5.25 HMDB00510 2-furoylglycine cmp.TF2 168.0302 3.80 HMDB00439 2-hydroxyglutarate cmp.TF4 147.0299 7.00 HMDB00694 3-4-dihydroxybenzylamine cmp.TF6 138.0561 2.80 HMDB12153 3-4-dihydroxyphenylglycol cmp.TF7 169.0506 2.00 HMDB00318 3-hydroxykynurenate cmp.TF9 223.0724 3.90 HMDB00732 3-methyladipate/pimelate cmp.TF10 159.0663 6.75 HMDB00555* 4-hydroxybenzaldehyde cmp.TF13 121.0295 2.45 HMDB11718 4-hydroxybenzeneacetonitrile cmp.TF14 132.0455 1.20 HMDB29757 4-pyridoxate cmp.TF20 182.0459 3.65 HMDB00017 adenine cmp.TF27 134.0472 2.25 HMDB00034 adipate cmp.TF29 145.0506 6.80 HMDB00448 alanine cmp.TF31 88.0400 3.10 HMDB00161 alpha-glycerophosphate cmp.TF32 171.0064 7.25 HMDB00126 alpha-hydroxybutyrate/beta-hydroxybutyrate cmp.TF33 103.0401 3.60 HMDB00008* alpha-ketoglutarate cmp.TF35 145.0142 7.35 HMDB00208 arginine cmp.TF38 173.1040 3.80 HMDB00517 ascorbate cmp.TF39 175.0248 8.50 HMDB00044 aspartate cmp.TF41 132.0302 5.25 HMDB00191 azelaic acid cmp.TF42 187.0976 6.95 HMDB00784 benzoate cmp.TF43 121.0295 4.00 HMDB01870 butyrate cmp.TF46 87.0452 3.65 HMDB00039 caproate cmp.TF48 115.0765 3.50 HMDB00535 caprylate cmp.TF49 143.1078 3.40 HMDB00482 chenodeoxycholate/deoxycholate cmp.TF51 391.2854 4.00 HMDB00626* citrate/isocitrate cmp.TF53 191.0197 9.00 HMDB00094* citrulline cmp.TF54 174.0884 3.50 HMDB00904 corticosterone cmp.TF57 345.2071 1.15 HMDB01547 cytidine cmp.TF60 242.0782 2.20 HMDB00089 dCMP cmp.TF61 306.0497 7.40 HMDB01202 eicosapentaenoate cmp.TF67 301.2173 3.10 HMDB01999 erythronate cmp.TF68 135.0299 4.40 HMDB00613 fructose/glucose/galactose cmp.TF72 179.0561 1.85 HMDB00122 fumarate/maleate cmp.TF74 115.0037 7.05 HMDB00134 gentisate cmp.TF76 153.0193 4.60 HMDB00152 glucuronate cmp.TF78 193.0354 5.00 HMDB00127 glutamate cmp.TF79 146.0459 5.20 HMDB03339 glutamine cmp.TF80 145.0620 3.45 HMDB00641 glycerate cmp.TF83 105.0193 4.10 HMDB00139 glycodeoxycholate/glycochenodeoxycholate cmp.TF87 448.3068 3.80 HMDB00631* guanine cmp.TF89 150.0421 2.80 HMDB00132 guanosine cmp.TF90 282.0844 3.00 HMDB00133 hexose monophosphate cmp.TF92 259.0224 7.30 HMDB00124* histidine cmp.TF94 154.0620 3.80 HMDB00177 hydrocinnamate cmp.TF98 149.0608 3.60 HMDB00764 hypoxanthine cmp.TF100 135.0312 3.40 HMDB00157 indole-3-propionate cmp.TF102 188.0717 4.45 HMDB02302 indolelactate cmp.TF103 204.0666 4.40 HMDB00671 inositol cmp.TF107 179.0561 2.70 HMDB00211 isovalerate cmp.TF109 101.0608 3.55 HMDB00718 lactate cmp.TF111 89.0244 3.85 HMDB00190 lactose/sucrose/trehalose cmp.TF112 341.1089 2.45 HMDB00186* linoleoyl ethanolamide cmp.TF115 322.2752 1.10 HMDB12252 lithocholate cmp.TF116 375.2905 3.80 HMDB00761 lysine cmp.TF117 145.0983 4.60 HMDB00182 malate cmp.TF118 133.0142 6.95 HMDB00156 malonate cmp.TF119 103.0037 5.00 HMDB00691 methionine cmp.TF121 148.0440 3.00 HMDB00696 N6-acetyllysine cmp.TF125 187.1088 3.10 HMDB00206 nicotinate cmp.TF129 122.0248 4.05 HMDB01488 norepinephrine cmp.TF131 168.0666 3.00 HMDB00216 oxalate cmp.TF133 88.9880 7.40 HMDB02329 pantothenate cmp.TF134 218.1034 3.90 HMDB00210 pentose monophosphate cmp.TF135 229.0119 7.25 HMDB01548 phenylacetate cmp.TF137 135.0452 3.70 HMDB00209 phenylalanine cmp.TF138 164.0717 3.05 HMDB00159 proline cmp.TF142 114.0560 2.95 HMDB00162 propionate cmp.TF143 73.0295 3.90 HMDB00237 pyruvate cmp.TF147 87.0088 4.80 HMDB00243 quinate cmp.TF148 191.0561 4.30 HMDB03072 quinolinate cmp.TF149 166.0146 7.45 HMDB00232 riboflavin cmp.TF150 375.1310 1.60 HMDB00244 sebacate cmp.TF152 201.1132 6.75 HMDB00792 sorbitol cmp.TF156 181.0718 2.00 HMDB00247 suberate cmp.TF157 173.0819 6.75 HMDB00893 succinate cmp.TF158 117.0193 6.90 HMDB00254 taurine cmp.TF159 124.0074 3.60 HMDB00251 tetrahydro-1-methyl-beta-carboline-3-carboxylate cmp.TF162 229.0983 3.70 HMDB37942 theophylline cmp.TF163 179.0574 2.50 HMDB01889 threonine cmp.TF164 118.0510 3.50 HMDB00167 thymine cmp.TF165 125.0357 1.35 HMDB00262 tryptophan cmp.TF167 203.0826 3.35 HMDB00929 tyrosine cmp.TF168 180.0666 3.50 HMDB00158 uracil cmp.TF173 111.0200 1.50 HMDB00300 urate cmp.TF174 167.0211 5.25 HMDB00289 uridine cmp.TF175 243.0623 1.75 HMDB00296 xanthine cmp.TF179 151.0261 4.95 HMDB00292 xanthurenate cmp.TF180 204.0302 8.30 HMDB00881 xylose cmp.TF182 149.0455 1.75 HMDB00098 METABOLITES_END #END