#METABOLOMICS WORKBENCH tsimaom_20230620_111958 DATATRACK_ID:4104 STUDY_ID:ST002749 ANALYSIS_ID:AN004459 PROJECT_ID:PR001712
VERSION             	1
CREATED_ON             	June 23, 2023, 5:26 pm
#PROJECT
PR:PROJECT_TITLE                 	Bromeliad lipidomics for adaptation to elevation
PR:PROJECT_TYPE                  	MS untargeted analysis
PR:PROJECT_SUMMARY               	Untargeted analysis on Bromeliades leaf samples. The aim of this study was to
PR:PROJECT_SUMMARY               	evaluate the lipid profile alterations on Pitcairnia flammea leaves based on the
PR:PROJECT_SUMMARY               	different altitudes where they were collected. A lipidomic approach was applied
PR:PROJECT_SUMMARY               	to the samples. Ultra-high performance liquid chromatography coupled to
PR:PROJECT_SUMMARY               	electrospray ionization mass spectrometry (UHPLC-ESI-MS) was used to acquire raw
PR:PROJECT_SUMMARY               	data and MS-DIAL was used to perform data preprocessing. The statistical
PR:PROJECT_SUMMARY               	analysis of UHPLC-ESI-MS data in both ionization modes enabled the visualization
PR:PROJECT_SUMMARY               	of a trend distribution based on the altitude.
PR:INSTITUTE                     	University of Campinas
PR:DEPARTMENT                    	Chemistry's Institute
PR:LABORATORY                    	Laboratory of Bioanalytics and Integrated Omics
PR:LAST_NAME                     	Matos
PR:FIRST_NAME                    	Taynara
PR:ADDRESS                       	Rua Josué de Castro, s/n – Cidade Universitária, 13083-970, Campinas – SP,
PR:ADDRESS                       	Brazil
PR:EMAIL                         	t262827@dac.unicamp.br
PR:PHONE                         	(85)996154192
#STUDY
ST:STUDY_TITLE                   	Bromeliad lipidomics for adaptation to elevation
ST:STUDY_SUMMARY                 	Untargeted analysis on Bromeliades leaf samples. The aim of this study was to
ST:STUDY_SUMMARY                 	evaluate the lipid profile alterations on Pitcairnia flammea leaves based on the
ST:STUDY_SUMMARY                 	different altitudes where they were collected. A lipidomic approach was applied
ST:STUDY_SUMMARY                 	to the samples. Ultra-high performance liquid chromatography coupled to
ST:STUDY_SUMMARY                 	electrospray ionization mass spectrometry (UHPLC-ESI-MS) was used to acquire raw
ST:STUDY_SUMMARY                 	data and MS-DIAL was used to perform data preprocessing. The statistical
ST:STUDY_SUMMARY                 	analysis of UHPLC-ESI-MS data in both ionization modes enabled the visualization
ST:STUDY_SUMMARY                 	of a trend distribution based on the altitude. Our study grouped the individuals
ST:STUDY_SUMMARY                 	into three major groups: one with individuals from the lower elevations (UBA,
ST:STUDY_SUMMARY                 	RAN, and COR), another with individuals from the highest elevations (PAP and
ST:STUDY_SUMMARY                 	MAR), and another with individuals from mixed localities from intermediate
ST:STUDY_SUMMARY                 	elevations. Higher elevation population showed an increase in very long chain
ST:STUDY_SUMMARY                 	fatty acids and monounsaturated lipids compared to lower elevation as a response
ST:STUDY_SUMMARY                 	to cold higher elevations affecting the leaves' membrane fluidity. In addition,
ST:STUDY_SUMMARY                 	the higher elevation population showed a higher abundance of hexosylceramides
ST:STUDY_SUMMARY                 	and phosphatidylglycerol compared to lower ones.
ST:INSTITUTE                     	University of Campinas
ST:DEPARTMENT                    	Chemistry's Institute
ST:LABORATORY                    	Laboratory of Bioanalytics and Integrated Omics
ST:LAST_NAME                     	Matos
ST:FIRST_NAME                    	Taynara
ST:ADDRESS                       	Rua Josué de Castro, s/n – Cidade Universitária, 13083-970, Campinas – SP,
ST:ADDRESS                       	Brazil
ST:EMAIL                         	t262827@dac.unicamp.br
ST:PHONE                         	(85)996154192
#SUBJECT
SU:SUBJECT_TYPE                  	Plant
SU:SUBJECT_SPECIES               	Pitcairnia flammea
#SUBJECT_SAMPLE_FACTORS:         	SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data
SUBJECT_SAMPLE_FACTORS           	-	COR186-NEG	Collection locale:COR	Sample_type=Sample; RAW_FILE_NAME=COR186-NEG
SUBJECT_SAMPLE_FACTORS           	-	COR191-NEG	Collection locale:COR	Sample_type=Sample; RAW_FILE_NAME=COR191-NEG
SUBJECT_SAMPLE_FACTORS           	-	COR192-NEG	Collection locale:COR	Sample_type=Sample; RAW_FILE_NAME=COR192-NEG
SUBJECT_SAMPLE_FACTORS           	-	COR195-NEG	Collection locale:COR	Sample_type=Sample; RAW_FILE_NAME=COR195-NEG
SUBJECT_SAMPLE_FACTORS           	-	COR197-NEG	Collection locale:COR	Sample_type=Sample; RAW_FILE_NAME=COR197-NEG
SUBJECT_SAMPLE_FACTORS           	-	COR199-NEG	Collection locale:COR	Sample_type=Sample; RAW_FILE_NAME=COR199-NEG
SUBJECT_SAMPLE_FACTORS           	-	ITA102-NEG	Collection locale:ITA	Sample_type=Sample; RAW_FILE_NAME=ITA102-NEG
SUBJECT_SAMPLE_FACTORS           	-	ITA110-NEG	Collection locale:ITA	Sample_type=Sample; RAW_FILE_NAME=ITA110-NEG
SUBJECT_SAMPLE_FACTORS           	-	ITA113-NEG	Collection locale:ITA	Sample_type=Sample; RAW_FILE_NAME=ITA113-NEG
SUBJECT_SAMPLE_FACTORS           	-	ITA115-NEG	Collection locale:ITA	Sample_type=Sample; RAW_FILE_NAME=ITA115-NEG
SUBJECT_SAMPLE_FACTORS           	-	ITA116-NEG	Collection locale:ITA	Sample_type=Sample; RAW_FILE_NAME=ITA116-NEG
SUBJECT_SAMPLE_FACTORS           	-	ITA119-NEG	Collection locale:ITA	Sample_type=Sample; RAW_FILE_NAME=ITA119-NEG
SUBJECT_SAMPLE_FACTORS           	-	MAC152-NEG	Collection locale:MAC	Sample_type=Sample; RAW_FILE_NAME=MAC152-NEG
SUBJECT_SAMPLE_FACTORS           	-	MAC153-NEG	Collection locale:MAC	Sample_type=Sample; RAW_FILE_NAME=MAC153-NEG
SUBJECT_SAMPLE_FACTORS           	-	MAC155-NEG	Collection locale:MAC	Sample_type=Sample; RAW_FILE_NAME=MAC155-NEG
SUBJECT_SAMPLE_FACTORS           	-	MAC158-NEG	Collection locale:MAC	Sample_type=Sample; RAW_FILE_NAME=MAC158-NEG
SUBJECT_SAMPLE_FACTORS           	-	MAC163-NEG	Collection locale:MAC	Sample_type=Sample; RAW_FILE_NAME=MAC163-NEG
SUBJECT_SAMPLE_FACTORS           	-	MAR128-NEG	Collection locale:MAR	Sample_type=Sample; RAW_FILE_NAME=MAR128-NEG
SUBJECT_SAMPLE_FACTORS           	-	MAR131-NEG	Collection locale:MAR	Sample_type=Sample; RAW_FILE_NAME=MAR131-NEG
SUBJECT_SAMPLE_FACTORS           	-	MAR134-NEG	Collection locale:MAR	Sample_type=Sample; RAW_FILE_NAME=MAR134-NEG
SUBJECT_SAMPLE_FACTORS           	-	MAR139-NEG	Collection locale:MAR	Sample_type=Sample; RAW_FILE_NAME=MAR139-NEG
SUBJECT_SAMPLE_FACTORS           	-	MAR155-NEG	Collection locale:MAR	Sample_type=Sample; RAW_FILE_NAME=MAR155-NEG
SUBJECT_SAMPLE_FACTORS           	-	PAP01-NEG	Collection locale:PAP	Sample_type=Sample; RAW_FILE_NAME=PAP01-NEG
SUBJECT_SAMPLE_FACTORS           	-	PAP04-NEG	Collection locale:PAP	Sample_type=Sample; RAW_FILE_NAME=PAP04-NEG
SUBJECT_SAMPLE_FACTORS           	-	PAP15-NEG	Collection locale:PAP	Sample_type=Sample; RAW_FILE_NAME=PAP15-NEG
SUBJECT_SAMPLE_FACTORS           	-	PAP17-NEG	Collection locale:PAP	Sample_type=Sample; RAW_FILE_NAME=PAP17-NEG
SUBJECT_SAMPLE_FACTORS           	-	PAP24-NEG	Collection locale:PAP	Sample_type=Sample; RAW_FILE_NAME=PAP24-NEG
SUBJECT_SAMPLE_FACTORS           	-	PES142-NEG	Collection locale:PES	Sample_type=Sample; RAW_FILE_NAME=PES142-NEG
SUBJECT_SAMPLE_FACTORS           	-	PES145-NEG	Collection locale:PES	Sample_type=Sample; RAW_FILE_NAME=PES145-NEG
SUBJECT_SAMPLE_FACTORS           	-	PES148-NEG	Collection locale:PES	Sample_type=Sample; RAW_FILE_NAME=PES148-NEG
SUBJECT_SAMPLE_FACTORS           	-	PES149-NEG	Collection locale:PES	Sample_type=Sample; RAW_FILE_NAME=PES149-NEG
SUBJECT_SAMPLE_FACTORS           	-	PES150-NEG	Collection locale:PES	Sample_type=Sample; RAW_FILE_NAME=PES150-NEG
SUBJECT_SAMPLE_FACTORS           	-	QC01-NEG	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC01-NEG
SUBJECT_SAMPLE_FACTORS           	-	QC02-NEG	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC02-NEG
SUBJECT_SAMPLE_FACTORS           	-	QC03-NEG	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC03-NEG
SUBJECT_SAMPLE_FACTORS           	-	QC04-NEG	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC04-NEG
SUBJECT_SAMPLE_FACTORS           	-	QC05-NEG	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC05-NEG
SUBJECT_SAMPLE_FACTORS           	-	QC06-NEG	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC06-NEG
SUBJECT_SAMPLE_FACTORS           	-	QC07-NEG	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC07-NEG
SUBJECT_SAMPLE_FACTORS           	-	QC08-NEG	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC08-NEG
SUBJECT_SAMPLE_FACTORS           	-	QC09-NEG	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC09-NEG
SUBJECT_SAMPLE_FACTORS           	-	QC010-NEG	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC010-NEG
SUBJECT_SAMPLE_FACTORS           	-	RAN167-NEG	Collection locale:RAN	Sample_type=Sample; RAW_FILE_NAME=RAN167-NEG
SUBJECT_SAMPLE_FACTORS           	-	RAN169-NEG	Collection locale:RAN	Sample_type=Sample; RAW_FILE_NAME=RAN169-NEG
SUBJECT_SAMPLE_FACTORS           	-	RAN173-NEG	Collection locale:RAN	Sample_type=Sample; RAW_FILE_NAME=RAN173-NEG
SUBJECT_SAMPLE_FACTORS           	-	RAN174-NEG	Collection locale:RAN	Sample_type=Sample; RAW_FILE_NAME=RAN174-NEG
SUBJECT_SAMPLE_FACTORS           	-	RAN175-NEG	Collection locale:RAN	Sample_type=Sample; RAW_FILE_NAME=RAN175-NEG
SUBJECT_SAMPLE_FACTORS           	-	RAN177-NEG	Collection locale:RAN	Sample_type=Sample; RAW_FILE_NAME=RAN177-NEG
SUBJECT_SAMPLE_FACTORS           	-	RAN178-NEG	Collection locale:RAN	Sample_type=Sample; RAW_FILE_NAME=RAN178-NEG
SUBJECT_SAMPLE_FACTORS           	-	UBA01-NEG	Collection locale:UBA	Sample_type=Sample; RAW_FILE_NAME=UBA01-NEG
SUBJECT_SAMPLE_FACTORS           	-	UBA02-NEG	Collection locale:UBA	Sample_type=Sample; RAW_FILE_NAME=UBA02-NEG
SUBJECT_SAMPLE_FACTORS           	-	UBA04-NEG	Collection locale:UBA	Sample_type=Sample; RAW_FILE_NAME=UBA04-NEG
SUBJECT_SAMPLE_FACTORS           	-	UBA05-NEG	Collection locale:UBA	Sample_type=Sample; RAW_FILE_NAME=UBA05-NEG
SUBJECT_SAMPLE_FACTORS           	-	UBA06-NEG	Collection locale:UBA	Sample_type=Sample; RAW_FILE_NAME=UBA06-NEG
SUBJECT_SAMPLE_FACTORS           	-	UBA08-NEG	Collection locale:UBA	Sample_type=Sample; RAW_FILE_NAME=UBA08-NEG
SUBJECT_SAMPLE_FACTORS           	-	COR186-POS	Collection locale:COR	Sample_type=Sample; RAW_FILE_NAME=COR186-POS
SUBJECT_SAMPLE_FACTORS           	-	COR191-POS	Collection locale:COR	Sample_type=Sample; RAW_FILE_NAME=COR191-POS
SUBJECT_SAMPLE_FACTORS           	-	COR192-POS	Collection locale:COR	Sample_type=Sample; RAW_FILE_NAME=COR192-POS
SUBJECT_SAMPLE_FACTORS           	-	COR195-POS	Collection locale:COR	Sample_type=Sample; RAW_FILE_NAME=COR195-POS
SUBJECT_SAMPLE_FACTORS           	-	COR197-POS	Collection locale:COR	Sample_type=Sample; RAW_FILE_NAME=COR197-POS
SUBJECT_SAMPLE_FACTORS           	-	COR199-POS	Collection locale:COR	Sample_type=Sample; RAW_FILE_NAME=COR199-POS
SUBJECT_SAMPLE_FACTORS           	-	ITA102-POS	Collection locale:ITA	Sample_type=Sample; RAW_FILE_NAME=ITA102-POS
SUBJECT_SAMPLE_FACTORS           	-	ITA110-POS	Collection locale:ITA	Sample_type=Sample; RAW_FILE_NAME=ITA110-POS
SUBJECT_SAMPLE_FACTORS           	-	ITA113-POS	Collection locale:ITA	Sample_type=Sample; RAW_FILE_NAME=ITA113-POS
SUBJECT_SAMPLE_FACTORS           	-	ITA115-POS	Collection locale:ITA	Sample_type=Sample; RAW_FILE_NAME=ITA115-POS
SUBJECT_SAMPLE_FACTORS           	-	ITA116-POS	Collection locale:ITA	Sample_type=Sample; RAW_FILE_NAME=ITA116-POS
SUBJECT_SAMPLE_FACTORS           	-	ITA119-POS	Collection locale:ITA	Sample_type=Sample; RAW_FILE_NAME=ITA119-POS
SUBJECT_SAMPLE_FACTORS           	-	MAC152-POS	Collection locale:MAC	Sample_type=Sample; RAW_FILE_NAME=MAC152-POS
SUBJECT_SAMPLE_FACTORS           	-	MAC153-POS	Collection locale:MAC	Sample_type=Sample; RAW_FILE_NAME=MAC153-POS
SUBJECT_SAMPLE_FACTORS           	-	MAC155-POS	Collection locale:MAC	Sample_type=Sample; RAW_FILE_NAME=MAC155-POS
SUBJECT_SAMPLE_FACTORS           	-	MAC158-POS	Collection locale:MAC	Sample_type=Sample; RAW_FILE_NAME=MAC158-POS
SUBJECT_SAMPLE_FACTORS           	-	MAC163-POS	Collection locale:MAC	Sample_type=Sample; RAW_FILE_NAME=MAC163-POS
SUBJECT_SAMPLE_FACTORS           	-	MAR128-POS	Collection locale:MAR	Sample_type=Sample; RAW_FILE_NAME=MAR128-POS
SUBJECT_SAMPLE_FACTORS           	-	MAR131-POS	Collection locale:MAR	Sample_type=Sample; RAW_FILE_NAME=MAR131-POS
SUBJECT_SAMPLE_FACTORS           	-	MAR134-POS	Collection locale:MAR	Sample_type=Sample; RAW_FILE_NAME=MAR134-POS
SUBJECT_SAMPLE_FACTORS           	-	MAR139-POS	Collection locale:MAR	Sample_type=Sample; RAW_FILE_NAME=MAR139-POS
SUBJECT_SAMPLE_FACTORS           	-	MAR155-POS	Collection locale:MAR	Sample_type=Sample; RAW_FILE_NAME=MAR155-POS
SUBJECT_SAMPLE_FACTORS           	-	PAP01-POS	Collection locale:PAP	Sample_type=Sample; RAW_FILE_NAME=PAP01-POS
SUBJECT_SAMPLE_FACTORS           	-	PAP04-POS	Collection locale:PAP	Sample_type=Sample; RAW_FILE_NAME=PAP04-POS
SUBJECT_SAMPLE_FACTORS           	-	PAP15-POS	Collection locale:PAP	Sample_type=Sample; RAW_FILE_NAME=PAP15-POS
SUBJECT_SAMPLE_FACTORS           	-	PAP17-POS	Collection locale:PAP	Sample_type=Sample; RAW_FILE_NAME=PAP17-POS
SUBJECT_SAMPLE_FACTORS           	-	PAP24-POS	Collection locale:PAP	Sample_type=Sample; RAW_FILE_NAME=PAP24-POS
SUBJECT_SAMPLE_FACTORS           	-	PES142-POS	Collection locale:PES	Sample_type=Sample; RAW_FILE_NAME=PES142-POS
SUBJECT_SAMPLE_FACTORS           	-	PES145-POS	Collection locale:PES	Sample_type=Sample; RAW_FILE_NAME=PES145-POS
SUBJECT_SAMPLE_FACTORS           	-	PES148-POS	Collection locale:PES	Sample_type=Sample; RAW_FILE_NAME=PES148-POS
SUBJECT_SAMPLE_FACTORS           	-	PES149-POS	Collection locale:PES	Sample_type=Sample; RAW_FILE_NAME=PES149-POS
SUBJECT_SAMPLE_FACTORS           	-	PES150-POS	Collection locale:PES	Sample_type=Sample; RAW_FILE_NAME=PES150-POS
SUBJECT_SAMPLE_FACTORS           	-	QC01-POS	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC01-POS
SUBJECT_SAMPLE_FACTORS           	-	QC02-POS	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC02-POS
SUBJECT_SAMPLE_FACTORS           	-	QC03-POS	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC03-POS
SUBJECT_SAMPLE_FACTORS           	-	QC04-POS	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC04-POS
SUBJECT_SAMPLE_FACTORS           	-	QC05-POS	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC05-POS
SUBJECT_SAMPLE_FACTORS           	-	QC06-POS	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC06-POS
SUBJECT_SAMPLE_FACTORS           	-	QC07-POS	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC07-POS
SUBJECT_SAMPLE_FACTORS           	-	QC08-POS	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC08-POS
SUBJECT_SAMPLE_FACTORS           	-	QC09-POS	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC09-POS
SUBJECT_SAMPLE_FACTORS           	-	QC010-POS	Collection locale:Pooled QC	Sample_type=Quality Control (QC); RAW_FILE_NAME=QC010-POS
SUBJECT_SAMPLE_FACTORS           	-	RAN167-POS	Collection locale:RAN	Sample_type=Sample; RAW_FILE_NAME=RAN167-POS
SUBJECT_SAMPLE_FACTORS           	-	RAN169-POS	Collection locale:RAN	Sample_type=Sample; RAW_FILE_NAME=RAN169-POS
SUBJECT_SAMPLE_FACTORS           	-	RAN173-POS	Collection locale:RAN	Sample_type=Sample; RAW_FILE_NAME=RAN173-POS
SUBJECT_SAMPLE_FACTORS           	-	RAN174-POS	Collection locale:RAN	Sample_type=Sample; RAW_FILE_NAME=RAN174-POS
SUBJECT_SAMPLE_FACTORS           	-	RAN175-POS	Collection locale:RAN	Sample_type=Sample; RAW_FILE_NAME=RAN175-POS
SUBJECT_SAMPLE_FACTORS           	-	RAN177-POS	Collection locale:RAN	Sample_type=Sample; RAW_FILE_NAME=RAN177-POS
SUBJECT_SAMPLE_FACTORS           	-	RAN178-POS	Collection locale:RAN	Sample_type=Sample; RAW_FILE_NAME=RAN178-POS
SUBJECT_SAMPLE_FACTORS           	-	UBA01-POS	Collection locale:UBA	Sample_type=Sample; RAW_FILE_NAME=UBA01-POS
SUBJECT_SAMPLE_FACTORS           	-	UBA02-POS	Collection locale:UBA	Sample_type=Sample; RAW_FILE_NAME=UBA02-POS
SUBJECT_SAMPLE_FACTORS           	-	UBA04-POS	Collection locale:UBA	Sample_type=Sample; RAW_FILE_NAME=UBA04-POS
SUBJECT_SAMPLE_FACTORS           	-	UBA05-POS	Collection locale:UBA	Sample_type=Sample; RAW_FILE_NAME=UBA05-POS
SUBJECT_SAMPLE_FACTORS           	-	UBA06-POS	Collection locale:UBA	Sample_type=Sample; RAW_FILE_NAME=UBA06-POS
SUBJECT_SAMPLE_FACTORS           	-	UBA08-POS	Collection locale:UBA	Sample_type=Sample; RAW_FILE_NAME=UBA08-POS
#COLLECTION
CO:COLLECTION_SUMMARY            	Pitcairnia flammea individuals were collected in different altitudes locations
CO:COLLECTION_SUMMARY            	and named according to the local. PAP was collected at 2140 m, MAR 2037 m, PES
CO:COLLECTION_SUMMARY            	1496 m, ITA 1139 m, MAC 959 m, COR 425 m, RAN 25 m and UBA 20 m. Then, the
CO:COLLECTION_SUMMARY            	plants were cultivated at the Institute of Biology (UNICAMP, Brazil). The
CO:COLLECTION_SUMMARY            	mid-region of the youngest fully expanded leaves of five to seven individuals
CO:COLLECTION_SUMMARY            	per population of healthy plants with visually appealing leaves were harvested,
CO:COLLECTION_SUMMARY            	and immediately frozen in liquid nitrogen, followed the -80ºC storage until
CO:COLLECTION_SUMMARY            	sample preparation.
CO:SAMPLE_TYPE                   	Leaves
CO:COLLECTION_LOCATION           	Institute of Biology (UNICAMP, Brazil)
#TREATMENT
TR:TREATMENT_SUMMARY             	Leaves were macerated to fine powder using a mortar and pestle in liquid
TR:TREATMENT_SUMMARY             	nitrogen condition.
#SAMPLEPREP
SP:SAMPLEPREP_SUMMARY            	Lipid extraction was based on Hummel et al. Method. 60 mL of solvent mixture was
SP:SAMPLEPREP_SUMMARY            	prepared with pre-cooled (-20ºC) methanol (MeOH, grade HPLC, LiChrosolv® Reag.
SP:SAMPLEPREP_SUMMARY            	Ph. Eur.) and methyl-tert-butyl-ether (MTBE, grade HPLC, purity 99,9%,
SP:SAMPLEPREP_SUMMARY            	Sigma-Aldrich) in proportion (1:3 v/v). In a 2 mL tube, 50 mg of macerated
SP:SAMPLEPREP_SUMMARY            	sample were added and 1 mL of the solvent mixture. The samples were incubated
SP:SAMPLEPREP_SUMMARY            	for 5 min under agitation at 500 rpm at 4 ºC (Microtube Shaking Incubator
SP:SAMPLEPREP_SUMMARY            	AccuTherm, Labnet International, Inc.), followed by an ultrasonication (Branson
SP:SAMPLEPREP_SUMMARY            	5800 Ultrasonic Bath, Emerson, Danbury, USA) in ice-cold bath in 10 minutes.
SP:SAMPLEPREP_SUMMARY            	After adding 500 μL mixture of water type I:MeOH (3:1 v/v), the samples were
SP:SAMPLEPREP_SUMMARY            	vortexed and centrifuged for 5 min at 4 ºC, 10000 rpm (Hettich Zentrifugen
SP:SAMPLEPREP_SUMMARY            	Mikro 220R, Tuttlingen, DE). The three phases were separated and dried in a
SP:SAMPLEPREP_SUMMARY            	vacuum concentrator (Concentrator Plus, Eppendorf AG, Hamburg, DE), at ambient
SP:SAMPLEPREP_SUMMARY            	temperature under vacuum - alcoholic mode, and stored at -80 ºC until the
SP:SAMPLEPREP_SUMMARY            	chromatographic analysis.
SP:SAMPLEPREP_PROTOCOL_FILENAME  	SamplePrep-BromeliadLipidomics.pdf
#CHROMATOGRAPHY
CH:CHROMATOGRAPHY_TYPE           	Reversed phase
CH:INSTRUMENT_NAME               	Thermo Scientific UltiMate™ 3000 UHPLC RSLCnano system
CH:COLUMN_NAME                   	Supelco Sigma-Aldrich Titan C18 (100 x 2.1mm, 1.9um)
CH:SOLVENT_A                     	40% acetonitrile/60% water; 10 mM ammonium acetate
CH:SOLVENT_B                     	10% acetonitrile/90% isopropanol; 10 mM ammonium acetate
CH:FLOW_GRADIENT                 	250 µL/min: 0-2 min: 40% B, 2-3 min: 50% B, 3-6 min: 50% B, 6.1-8 min: 70% B,
CH:FLOW_GRADIENT                 	8-9 min: 100% B, 9-11 min: 100% B, 11-12 min: 40% B, 12-14 min: 40% B.
CH:FLOW_RATE                     	250 µL/min
CH:COLUMN_TEMPERATURE            	40
CH:METHODS_FILENAME              	UntargetedRP-BromeliadLipidomics.pdf
#ANALYSIS
AN:ANALYSIS_TYPE                 	MS
AN:ANALYSIS_PROTOCOL_FILE        	UntargetedRP-BromeliadLipidomics.pdf
#MS
MS:INSTRUMENT_NAME               	Thermo Q Exactive Orbitrap
MS:INSTRUMENT_TYPE               	Orbitrap
MS:MS_TYPE                       	ESI
MS:ION_MODE                      	NEGATIVE
MS:MS_COMMENTS                   	-
MS:MS_RESULTS_FILE               	ST002749_AN004459_Results.txt	UNITS:Peak area	Has m/z:Yes	Has RT:Yes	RT units:Minutes
#END