#METABOLOMICS WORKBENCH Liukan_20240513_021542 DATATRACK_ID:4836 STUDY_ID:ST003300 ANALYSIS_ID:AN005407 PROJECT_ID:PR002050
VERSION             	1
CREATED_ON             	May 13, 2024, 9:17 pm
#PROJECT
PR:PROJECT_TITLE                 	Hypothalamic SLC7A14 accounts for aging-reduced lipolysis in white adipose
PR:PROJECT_TITLE                 	tissue
PR:PROJECT_TYPE                  	Mass spectrometry
PR:PROJECT_SUMMARY               	The central nervous system has been implicated in the age-induced reduction in
PR:PROJECT_SUMMARY               	adipose tissue lipolysis. SLC7A14 is a lysosomal membrane protein highly
PR:PROJECT_SUMMARY               	expressed in the brain. Herein, we investigated the possible role of
PR:PROJECT_SUMMARY               	hypothalamic SLC7A14 in the age-induced lipolysis reduction. In this study, we
PR:PROJECT_SUMMARY               	demonstrated the expression of SLC7A14 was reduced in proopiomelanocortin (POMC)
PR:PROJECT_SUMMARY               	neurons of aged mice. Overexpression of SLC7A14 in POMC neurons alleviated the
PR:PROJECT_SUMMARY               	age-induced reduction in white adipose tissue (WAT) lipolysis, whereas SLC7A14
PR:PROJECT_SUMMARY               	deletion mimicked the age-induced lipolysis impairment. Moreover, POMC SLC7A14
PR:PROJECT_SUMMARY               	regulated WAT lipolysis independently of sympathetic nerves in WAT. Metabolomics
PR:PROJECT_SUMMARY               	analysis revealed that POMC SLC7A14 increased the primary bile acid
PR:PROJECT_SUMMARY               	taurochenodeoxycholic acid (TCDCA) content, which mediated the SLC7A14 knockout-
PR:PROJECT_SUMMARY               	or age-induced WAT lipolysis impairment. Furthermore, SLC7A14-increased TCDCA
PR:PROJECT_SUMMARY               	content is dependent on intestinal apical sodium-dependent bile acid transporter
PR:PROJECT_SUMMARY               	(ASBT), which is regulated by intestinal sympathetic afferent nerves. Finally,
PR:PROJECT_SUMMARY               	SLC7A14 regulated the intestinal sympathetic afferent nerves by inhibiting
PR:PROJECT_SUMMARY               	mTORC1 signaling through inhibiting TSC1 phosphorylation. Collectively, our
PR:PROJECT_SUMMARY               	study suggests the function for central SLC7A14 and an upstream mechanism for
PR:PROJECT_SUMMARY               	the mTORC1 signaling pathway. Moreover, our data provides insights into the
PR:PROJECT_SUMMARY               	brain–gut–adipose tissue crosstalk in age-induced lipolysis impairment.
PR:INSTITUTE                     	Shanghai Institutes for Biological Sciences (SIBS) Chinese Academy of Sciences
PR:INSTITUTE                     	(CAS)
PR:LAST_NAME                     	Liu
PR:FIRST_NAME                    	Kan
PR:ADDRESS                       	No. 320, Yueyang Road, Shanghai, Shanghai, Shanghai/Shanghai/xuhui, 200000,
PR:ADDRESS                       	China
PR:EMAIL                         	liukan2019@sibs.ac.cn
PR:PHONE                         	021-17718134725
#STUDY
ST:STUDY_TITLE                   	Hypothalamic SLC7A14 accounts for aging-reduced lipolysis in white adipose
ST:STUDY_TITLE                   	tissue
ST:STUDY_SUMMARY                 	The central nervous system has been implicated in the age-induced reduction in
ST:STUDY_SUMMARY                 	adipose tissue lipolysis. SLC7A14 is a lysosomal membrane protein highly
ST:STUDY_SUMMARY                 	expressed in the brain. Herein, we investigated the possible role of
ST:STUDY_SUMMARY                 	hypothalamic SLC7A14 in the age-induced lipolysis reduction. In this study, we
ST:STUDY_SUMMARY                 	demonstrated the expression of SLC7A14 was reduced in proopiomelanocortin (POMC)
ST:STUDY_SUMMARY                 	neurons of aged mice. Overexpression of SLC7A14 in POMC neurons alleviated the
ST:STUDY_SUMMARY                 	age-induced reduction in white adipose tissue (WAT) lipolysis, whereas SLC7A14
ST:STUDY_SUMMARY                 	deletion mimicked the age-induced lipolysis impairment. Moreover, POMC SLC7A14
ST:STUDY_SUMMARY                 	regulated WAT lipolysis independently of sympathetic nerves in WAT. Metabolomics
ST:STUDY_SUMMARY                 	analysis revealed that POMC SLC7A14 increased the primary bile acid
ST:STUDY_SUMMARY                 	taurochenodeoxycholic acid (TCDCA) content, which mediated the SLC7A14 knockout-
ST:STUDY_SUMMARY                 	or age-induced WAT lipolysis impairment. Furthermore, SLC7A14-increased TCDCA
ST:STUDY_SUMMARY                 	content is dependent on intestinal apical sodium-dependent bile acid transporter
ST:STUDY_SUMMARY                 	(ASBT), which is regulated by intestinal sympathetic afferent nerves. Finally,
ST:STUDY_SUMMARY                 	SLC7A14 regulated the intestinal sympathetic afferent nerves by inhibiting
ST:STUDY_SUMMARY                 	mTORC1 signaling through inhibiting TSC1 phosphorylation. Collectively, our
ST:STUDY_SUMMARY                 	study suggests the function for central SLC7A14 and an upstream mechanism for
ST:STUDY_SUMMARY                 	the mTORC1 signaling pathway. Moreover, our data provides insights into the
ST:STUDY_SUMMARY                 	brain–gut–adipose tissue crosstalk in age-induced lipolysis impairment.
ST:INSTITUTE                     	Shanghai Institutes for Biological Sciences (SIBS) Chinese Academy of Sciences
ST:INSTITUTE                     	(CAS)
ST:LAST_NAME                     	Liu
ST:FIRST_NAME                    	Kan
ST:ADDRESS                       	No. 320, Yueyang Road, Shanghai
ST:EMAIL                         	liukan2019@sibs.ac.cn
ST:PHONE                         	021-17718134725
#SUBJECT
SU:SUBJECT_TYPE                  	Mammal
SU:SUBJECT_SPECIES               	Mus musculus
SU:TAXONOMY_ID                   	10090
SU:GENDER                        	Male
#FACTORS
#SUBJECT_SAMPLE_FACTORS:         	SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data
SUBJECT_SAMPLE_FACTORS           	-	control3	Sample source:Blood serum | Genotype:WT | Treatment:control	RAW_FILE_NAME(Raw file name)=HFX5_CN1_FZTM210013175-1A.mzML
SUBJECT_SAMPLE_FACTORS           	-	control1	Sample source:Blood serum | Genotype:WT | Treatment:control	RAW_FILE_NAME(Raw file name)=HFX5_CN1_FZTM210013176-1A.mzML
SUBJECT_SAMPLE_FACTORS           	-	control2	Sample source:Blood serum | Genotype:WT | Treatment:control	RAW_FILE_NAME(Raw file name)=HFX5_CN1_FZTM210013174-1A.mzML
SUBJECT_SAMPLE_FACTORS           	-	control4	Sample source:Blood serum | Genotype:WT | Treatment:control	RAW_FILE_NAME(Raw file name)=HFX5_CN1_FZTM210013177-1A.mzML
SUBJECT_SAMPLE_FACTORS           	-	control5	Sample source:Blood serum | Genotype:WT | Treatment:control	RAW_FILE_NAME(Raw file name)=HFX5_CN1_FZTM210013178-1A.mzML
SUBJECT_SAMPLE_FACTORS           	-	oe1	Sample source:Blood serum | Genotype:SLC7A14_OE | Treatment:control	RAW_FILE_NAME(Raw file name)=HFX5_CN2_FZTM210013180-1A.mzML
SUBJECT_SAMPLE_FACTORS           	-	oe2	Sample source:Blood serum | Genotype:SLC7A15_OE | Treatment:control	RAW_FILE_NAME(Raw file name)=HFX5_CN2_FZTM210013181-1A.mzML
SUBJECT_SAMPLE_FACTORS           	-	oe3	Sample source:Blood serum | Genotype:SLC7A16_OE | Treatment:control	RAW_FILE_NAME(Raw file name)=HFX5_CN2_FZTM210013182-1A.mzML
SUBJECT_SAMPLE_FACTORS           	-	oe4	Sample source:Blood serum | Genotype:SLC7A17_OE | Treatment:control	RAW_FILE_NAME(Raw file name)=HFX5_CN2_FZTM210013183-1A.mzML
SUBJECT_SAMPLE_FACTORS           	-	QC1	Sample source:Blood serum | Genotype:QC | Treatment:control	RAW_FILE_NAME(Raw file name)=HFX5_663032_CN_QC1.mzML
SUBJECT_SAMPLE_FACTORS           	-	QC2	Sample source:Blood serum | Genotype:QC | Treatment:control	RAW_FILE_NAME(Raw file name)=HFX5_663032_CN_QC2.mzML
SUBJECT_SAMPLE_FACTORS           	-	QC3	Sample source:Blood serum | Genotype:QC | Treatment:control	RAW_FILE_NAME(Raw file name)=HFX5_663032_CN_QC3.mzML
#COLLECTION
CO:COLLECTION_SUMMARY            	Serum was collected from control or overexpression of SLC7A14 in POMC neuron
CO:COLLECTION_SUMMARY            	mice.
CO:SAMPLE_TYPE                   	Blood (serum)
#TREATMENT
TR:TREATMENT_SUMMARY             	To overexpression of SLC7A14 in ARC POMC neurons, POMC Cre mice were bilaterally
TR:TREATMENT_SUMMARY             	injected either with a Cre-dependent AAV vector containing SLC7A14 in the
TR:TREATMENT_SUMMARY             	opposite orientation flanked by two inverted loxP sites
TR:TREATMENT_SUMMARY             	(AAV9-Syn-DIO-SLC7A14-mCherry, 1.5 × 1012 Pfu/mL, HANBIO) at a volume of 200 nL
TR:TREATMENT_SUMMARY             	into the ARC or an AAV vector containing only mCherry in the opposite
TR:TREATMENT_SUMMARY             	orientation flanked by two inverted loxP sites (AAV9-Syn-DIO-mCherry, 1.5 ×
TR:TREATMENT_SUMMARY             	1012 Pfu/mL, HANBIO) as a control.Serum was collected from control or
TR:TREATMENT_SUMMARY             	overexpression of SLC7A14 in POMC neuron mice.
#SAMPLEPREP
SP:SAMPLEPREP_SUMMARY            	The samples (100 μL) were placed in the EP tubes and resuspended with
SP:SAMPLEPREP_SUMMARY            	prechilled 80% methanol and 0.1% formic acid by well vortex. Then the
SP:SAMPLEPREP_SUMMARY            	sampleswere incubated on ice for 5 min and centrifuged at 15,000 g, 4°C for 20
SP:SAMPLEPREP_SUMMARY            	min. Some of supernatant was diluted to final concentration containing 53%
SP:SAMPLEPREP_SUMMARY            	methanol by LC-MS grade water.The samples were subsequently transferred to a
SP:SAMPLEPREP_SUMMARY            	fresh Eppendorf tube and then were centrifuged at 15000 g, 4°C for 20 min.
SP:SAMPLEPREP_SUMMARY            	Finally, the supernatant was injected into the LC-MS/MS system analysis
#CHROMATOGRAPHY
CH:CHROMATOGRAPHY_TYPE           	Reversed phase
CH:INSTRUMENT_NAME               	Thermo Vanquish
CH:COLUMN_NAME                   	Thermo Hypersil GOLD aQ (100 x 2.1mm,1.9um)
CH:SOLVENT_A                     	The eluents for the negative polarity mode were eluent A (5 mMammonium acetate,
CH:SOLVENT_A                     	pH 9.0
CH:SOLVENT_B                     	Methanol
CH:FLOW_GRADIENT                 	2% B, 1.5 min; 2-100% B, 12.0 min; 100% B, 14.0 min;100-2% B, 14.1 min;2% B,
CH:FLOW_GRADIENT                 	17 min.
CH:FLOW_RATE                     	0.2 mL/min
CH:COLUMN_TEMPERATURE            	40
#ANALYSIS
AN:ANALYSIS_TYPE                 	MS
#MS
MS:INSTRUMENT_NAME               	Thermo Q Exactive HF-X Orbitrap
MS:INSTRUMENT_TYPE               	Orbitrap
MS:MS_TYPE                       	ESI
MS:ION_MODE                      	NEGATIVE
MS:MS_COMMENTS                   	The raw data files generated by UHPLC-MS/MS were processed using the Compound
MS:MS_COMMENTS                   	Discoverer 3.1 (CD3.1, ThermoFisher) to perform peak alignment, peak picking,
MS:MS_COMMENTS                   	and quantitation for each metabolite. The main parameterswere set as follows:
MS:MS_COMMENTS                   	retention time tolerance, 0.2 minutes; actual mass tolerance, 5ppm; signal
MS:MS_COMMENTS                   	intensity tolerance, 30%; signal/noise ratio, 3; and minimum intensity, et al.
MS:MS_COMMENTS                   	After that, peak intensities were normalized to the total spectral intensity.The
MS:MS_COMMENTS                   	normalized data was used to predict the molecular formula based on additive
MS:MS_COMMENTS                   	ions, molecular ion peaks and fragment ions. And then peaks were matched with
MS:MS_COMMENTS                   	the mzCloud (https://www.mzcloud.org/),mzVault and MassList database to obtain
MS:MS_COMMENTS                   	the accurate qualitative and relative quantitative results.Statistical analyses
MS:MS_COMMENTS                   	were performed using the statistical software R (R version R-3.4.3),Python
MS:MS_COMMENTS                   	(Python 2.7.6 version) and CentOS (CentOS release 6.6),When data were not
MS:MS_COMMENTS                   	normally distributed, normal transformations were attempted using of area
MS:MS_COMMENTS                   	normalization method.
MS:MS_RESULTS_FILE               	ST003300_AN005407_Results.txt	UNITS:Peak area	Has m/z:Yes	Has RT:Yes	RT units:Minutes
#END