{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000190","ANALYSIS_ID":"AN000291","VERSION":"1","CREATED_ON":"2016-09-17"},

"PROJECT":{"PROJECT_TITLE":"Zinc Studies","PROJECT_SUMMARY":"Zinc Deficiency and SCFA","INSTITUTE":"USDA-ARS, Cornell University","DEPARTMENT":"Trace minerals and Nutrition","LABORATORY":"Tako Lab","LAST_NAME":"Tako","FIRST_NAME":"Elad","ADDRESS":"Ithaca, New York","EMAIL":"et79@cornell.edu","PHONE":"607-255-5434"},

"STUDY":{"STUDY_TITLE":"Trace minerals and Nutrition Zinc study","STUDY_TYPE":"Assessment of dietary zinc on SCFA cecal production","STUDY_SUMMARY":"Assessment of dietary zinc on SCFA cecal production","INSTITUTE":"University of Michigan","DEPARTMENT":"Biomedical Research Core Facilities","LABORATORY":"Metabolomics core","LAST_NAME":"Kachman","FIRST_NAME":"Maureen","ADDRESS":"6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714","EMAIL":"mkachman@umich.edu","PHONE":"-","NUM_GROUPS":"2","TOTAL_SUBJECTS":"12"},

"SUBJECT":{"SUBJECT_TYPE":"-","SUBJECT_SPECIES":"Gallus gallus","TAXONOMY_ID":"9031"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"SU0005095",
"Sample ID":"S00016508",
"Factors":{"Zink":"MINUS"}
},
{
"Subject ID":"SU0005095",
"Sample ID":"S00016509",
"Factors":{"Zink":"MINUS"}
},
{
"Subject ID":"SU0005095",
"Sample ID":"S00016510",
"Factors":{"Zink":"MINUS"}
},
{
"Subject ID":"SU0005095",
"Sample ID":"S00016511",
"Factors":{"Zink":"MINUS"}
},
{
"Subject ID":"SU0005095",
"Sample ID":"S00016512",
"Factors":{"Zink":"MINUS"}
},
{
"Subject ID":"SU0005095",
"Sample ID":"S00016513",
"Factors":{"Zink":"MINUS"}
},
{
"Subject ID":"SU0005096",
"Sample ID":"S00016514",
"Factors":{"Zink":"PLUS"}
},
{
"Subject ID":"SU0005096",
"Sample ID":"S00016515",
"Factors":{"Zink":"PLUS"}
},
{
"Subject ID":"SU0005096",
"Sample ID":"S00016516",
"Factors":{"Zink":"PLUS"}
},
{
"Subject ID":"SU0005096",
"Sample ID":"S00016517",
"Factors":{"Zink":"PLUS"}
},
{
"Subject ID":"SU0005096",
"Sample ID":"S00016518",
"Factors":{"Zink":"PLUS"}
},
{
"Subject ID":"SU0005096",
"Sample ID":"S00016519",
"Factors":{"Zink":"PLUS"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"-","SAMPLE_TYPE":"Intestinal Secretions"},

"TREATMENT":{"TREATMENT_SUMMARY":"-"},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"-","SAMPLEPREP_PROTOCOL_FILENAME":"SCFA_analysis_protocol-2015-03-10.docx"},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"GC","INSTRUMENT_NAME":"-","COLUMN_NAME":"Phenomenex Zebron ZB-WAXplus (30m x 0.25mm, 0.25um)","METHODS_ID":"AQM030","METHODS_FILENAME":"WAXPLUS_100-200C_2_SIM.txt"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS","LABORATORY_NAME":"MRC2 (University of Michigan)","ACQUISITION_PARAMETERS_FILE":"WAXPLUS_100-200C_2_SIM.txt","PROCESSING_PARAMETERS_FILE":"EX00360-SCFA-Quant-methods.m.zip"},

"MS":{"MS_COMMENTS":"-","INSTRUMENT_NAME":"Agilent 5975C","INSTRUMENT_TYPE":"Single quadrupole","MS_TYPE":"EI","ION_MODE":"POSITIVE"},

"MS_METABOLITE_DATA":{
"Units":"pmol/mg dry weight",

"Data":[{"Metabolite":"aceticacid","S00016508":"28.7142","S00016509":"40.5676","S00016510":"74.1352","S00016511":"139.9315","S00016512":"15.0318","S00016513":"41.1993","S00016514":"279.2641","S00016515":"49.7022","S00016516":"85.5670","S00016517":"59.3735","S00016518":"58.7670","S00016519":"63.7693"},{"Metabolite":"butyricacid","S00016508":"0.0000","S00016509":"7.6274","S00016510":"79.6318","S00016511":"63.6687","S00016512":"0.0000","S00016513":"12.8285","S00016514":"77.0638","S00016515":"29.1437","S00016516":"29.2628","S00016517":"61.9841","S00016518":"52.4931","S00016519":"38.6904"},{"Metabolite":"heptanoicacid","S00016508":"0.9106","S00016509":"0.0000","S00016510":"0.0000","S00016511":"0.0000","S00016512":"0.7165","S00016513":"1.0420","S00016514":"1.2446","S00016515":"0.0000","S00016516":"0.0000","S00016517":"0.0000","S00016518":"0.0000","S00016519":"0.0000"},{"Metabolite":"hexanoicacid","S00016508":"0.0000","S00016509":"0.0000","S00016510":"0.0000","S00016511":"0.0000","S00016512":"0.2308","S00016513":"0.0000","S00016514":"0.0000","S00016515":"0.5359","S00016516":"0.0000","S00016517":"0.0000","S00016518":"0.2765","S00016519":"0.6925"},{"Metabolite":"iso-butyricacid","S00016508":"1.2490","S00016509":"1.0271","S00016510":"5.4886","S00016511":"4.6484","S00016512":"0.2300","S00016513":"1.3585","S00016514":"2.8931","S00016515":"1.2484","S00016516":"0.9720","S00016517":"1.4107","S00016518":"2.2637","S00016519":"1.8591"},{"Metabolite":"isovalericacid","S00016508":"0.0000","S00016509":"0.0000","S00016510":"0.0000","S00016511":"0.0000","S00016512":"0.0000","S00016513":"0.0000","S00016514":"0.0000","S00016515":"0.0000","S00016516":"0.0000","S00016517":"0.0000","S00016518":"0.0000","S00016519":"0.0000"},{"Metabolite":"propionicacid","S00016508":"0.0000","S00016509":"0.4267","S00016510":"5.4279","S00016511":"17.7967","S00016512":"0.0000","S00016513":"15.7052","S00016514":"7.7284","S00016515":"1.9782","S00016516":"0.4145","S00016517":"2.3924","S00016518":"5.9496","S00016519":"4.3529"},{"Metabolite":"valericacid","S00016508":"1.3545","S00016509":"0.6144","S00016510":"3.0860","S00016511":"3.1713","S00016512":"1.0288","S00016513":"1.2744","S00016514":"3.8695","S00016515":"0.8166","S00016516":"1.0214","S00016517":"1.1353","S00016518":"1.0462","S00016519":"0.9725"}],

"Metabolites":[{"Metabolite":"aceticacid","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"176","inchi_key":"","kegg_id":"","other_id":"Acetate","other_id_type":"UM_Target_ID"},{"Metabolite":"butyricacid","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"20975673","inchi_key":"","kegg_id":"","other_id":"Butyrate","other_id_type":"UM_Target_ID"},{"Metabolite":"heptanoicacid","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"8094","inchi_key":"","kegg_id":"","other_id":"Heptanoate","other_id_type":"UM_Target_ID"},{"Metabolite":"hexanoicacid","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"8892","inchi_key":"","kegg_id":"","other_id":"Hexanoate","other_id_type":"UM_Target_ID"},{"Metabolite":"iso-butyricacid","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"6590","inchi_key":"","kegg_id":"","other_id":"iso-butyrate","other_id_type":"UM_Target_ID"},{"Metabolite":"isovalericacid","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"10430","inchi_key":"","kegg_id":"","other_id":"Isovalerate","other_id_type":"UM_Target_ID"},{"Metabolite":"propionicacid","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"1032","inchi_key":"","kegg_id":"","other_id":"Propionate","other_id_type":"UM_Target_ID"},{"Metabolite":"valericacid","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"7991","inchi_key":"","kegg_id":"","other_id":"Valerate","other_id_type":"UM_Target_ID"}]
}

}