{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000296","ANALYSIS_ID":"AN000474","VERSION":"1","CREATED_ON":"December 28, 2015, 9:25 am"},

"PROJECT":{"PROJECT_TITLE":"Brain-Immune-Gut Interaction Studies","PROJECT_SUMMARY":"Brain-Immune-Gut Interaction in Chronic Mild Stress","INSTITUTE":"University of Virginia","DEPARTMENT":"Neuroscience","LABORATORY":"Kipnis Lab","LAST_NAME":"Kipnis","FIRST_NAME":"Jonathan","ADDRESS":"Charlottesville, VA","EMAIL":"kipnis@virginia.edu","PHONE":"434-982-3858"},

"STUDY":{"STUDY_TITLE":"Chronic mild stress and Lactobacillus experiments on mice","STUDY_SUMMARY":"Mice were devided into three groups (Naive untreated, Stressed untreated, Stressed + Lacto). The stressed groups were subjected to unpredictable chronic mild stress for seven weeks. Three weeks into the protocol, the +Lacto groups were administered probiotic Lactobacillus daily.","INSTITUTE":"University of Michigan","DEPARTMENT":"Biomedical Research Core Facilities","LABORATORY":"Metabolomics core","LAST_NAME":"Kachman","FIRST_NAME":"Maureen","ADDRESS":"6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714","EMAIL":"mkachman@med.umich.edu","PHONE":"(734) 232-8175","NUM_GROUPS":"4","TOTAL_SUBJECTS":"16"},

"SUBJECT":{"SUBJECT_TYPE":"Animal","SUBJECT_SPECIES":"Mus musculus","TAXONOMY_ID":"10090"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"SU0005237",
"Sample ID":"S00016738",
"Factors":{"Lactobacillus":"N","Stress":"N"}
},
{
"Subject ID":"SU0005238",
"Sample ID":"S00016739",
"Factors":{"Lactobacillus":"N","Stress":"N"}
},
{
"Subject ID":"SU0005239",
"Sample ID":"S00016740",
"Factors":{"Lactobacillus":"N","Stress":"N"}
},
{
"Subject ID":"SU0005240",
"Sample ID":"S00016741",
"Factors":{"Lactobacillus":"N","Stress":"N"}
},
{
"Subject ID":"SU0005241",
"Sample ID":"S00016742",
"Factors":{"Lactobacillus":"N","Stress":"N"}
},
{
"Subject ID":"SU0005242",
"Sample ID":"S00016743",
"Factors":{"Lactobacillus":"N","Stress":"Y"}
},
{
"Subject ID":"SU0005243",
"Sample ID":"S00016744",
"Factors":{"Lactobacillus":"N","Stress":"Y"}
},
{
"Subject ID":"SU0005244",
"Sample ID":"S00016745",
"Factors":{"Lactobacillus":"N","Stress":"Y"}
},
{
"Subject ID":"SU0005245",
"Sample ID":"S00016746",
"Factors":{"Lactobacillus":"N","Stress":"Y"}
},
{
"Subject ID":"SU0005246",
"Sample ID":"S00016747",
"Factors":{"Lactobacillus":"N","Stress":"Y"}
},
{
"Subject ID":"SU0005247",
"Sample ID":"S00016748",
"Factors":{"Lactobacillus":"Y","Stress":"Y"}
},
{
"Subject ID":"SU0005248",
"Sample ID":"S00016749",
"Factors":{"Lactobacillus":"Y","Stress":"Y"}
},
{
"Subject ID":"SU0005249",
"Sample ID":"S00016750",
"Factors":{"Lactobacillus":"Y","Stress":"Y"}
},
{
"Subject ID":"SU0005250",
"Sample ID":"S00016751",
"Factors":{"Lactobacillus":"Y","Stress":"Y"}
},
{
"Subject ID":"SU0005251",
"Sample ID":"S00016752",
"Factors":{"Lactobacillus":"Y","Stress":"Y"}
},
{
"Subject ID":"SU9999996",
"Sample ID":"S00017167",
"Factors":{"Lactobacillus":"POOLED","Stress":"POOLED"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"-","SAMPLE_TYPE":"Serum"},

"TREATMENT":{"TREATMENT_SUMMARY":"-"},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"-","SAMPLEPREP_PROTOCOL_FILENAME":"ShortChainFattyAcids-20150305.docx"},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"GC","INSTRUMENT_NAME":"Agilent 7890A","COLUMN_NAME":"Phenomenex Zebron ZB-WAXplus (30m x 0.25mm, 0.25um)","METHODS_FILENAME":"WAXPLUS_100-200C_2_SIM.M"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS"},

"MS":{"INSTRUMENT_TYPE":"Single quadrupole","MS_TYPE":"EI","ION_MODE":"POSITIVE","MS_COMMENTS":"GCMS method","INSTRUMENT_NAME":"Agilent 5975C Agilent 5975C MS"},

"MS_METABOLITE_DATA":{
"Units":"uM",

"Data":[{"Metabolite":"acetic acid","S00016738":"6072.723","S00016739":"3470.08","S00016740":"1152.224","S00016741":"2396.397","S00016742":"2159.74","S00016743":"4137.853","S00016744":"2449.86","S00016745":"2047.229","S00016746":"2427.287","S00016747":"2628.231","S00016748":"1687.438","S00016749":"2894.744","S00016750":"2070.666","S00016751":"987.787","S00016752":"1077.45"},{"Metabolite":"butyric acid","S00016738":"33.494","S00016739":"25.51","S00016740":"16.505","S00016741":"66.207","S00016742":"36.846","S00016743":"32.786","S00016744":"21.664","S00016745":"17.511","S00016746":"15.958","S00016747":"17.531","S00016748":"17.286","S00016749":"22.716","S00016750":"177.01","S00016751":"14.269","S00016752":"89.634"},{"Metabolite":"heptanoic acid","S00016738":"2.974","S00016739":"0","S00016740":"0","S00016741":"3.551","S00016742":"0","S00016743":"3.115","S00016744":"3.591","S00016745":"0","S00016746":"0","S00016747":"0","S00016748":"0","S00016749":"0","S00016750":"10.332","S00016751":"0","S00016752":"4.265"},{"Metabolite":"hexanoic acid","S00016738":"4.545","S00016739":"3.675","S00016740":"3.818","S00016741":"7.815","S00016742":"3.752","S00016743":"5.404","S00016744":"7.428","S00016745":"5.022","S00016746":"3.145","S00016747":"3.633","S00016748":"4.217","S00016749":"3.594","S00016750":"28.825","S00016751":"2.331","S00016752":"9.412"},{"Metabolite":"iso-butyric acid","S00016738":"50.678","S00016739":"36.645","S00016740":"29.595","S00016741":"33.792","S00016742":"28.488","S00016743":"32.147","S00016744":"32.945","S00016745":"30.028","S00016746":"27.93","S00016747":"36.146","S00016748":"28.158","S00016749":"26.364","S00016750":"41.203","S00016751":"23.818","S00016752":"24.503"},{"Metabolite":"isovaleric acid","S00016738":"5.626","S00016739":"7.25","S00016740":"5.115","S00016741":"16.705","S00016742":"3.681","S00016743":"7.582","S00016744":"5.376","S00016745":"4.476","S00016746":"3.891","S00016747":"5.123","S00016748":"4.13","S00016749":"5.129","S00016750":"92.921","S00016751":"3.07","S00016752":"25.273"},{"Metabolite":"propionic acid","S00016738":"129.95","S00016739":"124.606","S00016740":"81.927","S00016741":"137.829","S00016742":"109.818","S00016743":"121.756","S00016744":"102.759","S00016745":"87.732","S00016746":"74.897","S00016747":"94.027","S00016748":"98.216","S00016749":"95.196","S00016750":"304.038","S00016751":"83.13","S00016752":"154.179"},{"Metabolite":"valeric acid","S00016738":"9.704","S00016739":"6.91","S00016740":"2.506","S00016741":"25.18","S00016742":"3.628","S00016743":"10.277","S00016744":"10.367","S00016745":"4.786","S00016746":"2.982","S00016747":"2.164","S00016748":"3.951","S00016749":"5.139","S00016750":"123.288","S00016751":"2.667","S00016752":"35.923"}],

"Metabolites":[{"Metabolite":"acetic acid","PubChem CID":"176"},{"Metabolite":"propionic acid","PubChem CID":"1032"},{"Metabolite":"iso-butyric acid","PubChem CID":"6590"},{"Metabolite":"butyric acid","PubChem CID":"20975673"},{"Metabolite":"isovaleric acid","PubChem CID":"10430"},{"Metabolite":"valeric acid","PubChem CID":"7991"},{"Metabolite":"hexanoic acid","PubChem CID":"8892"},{"Metabolite":"heptanoic acid","PubChem CID":"8094"}]
}

}