{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000530","ANALYSIS_ID":"AN000808","VERSION":"1","CREATED_ON":"January 5, 2017, 2:24 pm"},

"PROJECT":{"PROJECT_TITLE":"Effects of herb DG and KK01 on Type 2 Diabetes Mellitus (T2DM)","PROJECT_TYPE":"LC-MS Lipidomics","PROJECT_SUMMARY":"The long-term goal of this research is to use a system pharmacology approach to investigate novel drugs for type 2 diabetes based on the experience of Traditional Chinese Medicine (TCM). The aim of the current study is to use lipidomics to evaluate the anti-diabetic efficacy of DG extract and its major compounds and to interpret the drug targets and mechanisms. DG is a typical “heat clearing” herb in TCM, and has long been used as a treatment for type 2 diabetes. Phytochemicals with KK structure are the predominant constituents in DG extract, and KK01 is the major form, with a content of around 2% of dry herb. To verify that KK01 is the bioactive compound responsible for the effect of DG, we designed an animal experiment to investigate the efficacies of DG and KK01 on db/db mice in comparison to two first-line anti-diabetic drugs, metformin and rosiglitazone. It was found that after 9 weeks of treatments, KK01 was effective in inhibiting the increase of blood glucose of db/db mice, with effects comparable to metformin and rosiglitazone. To understand the mechanism, the mice blood was collected in fasting status, and the serum was separated and divided into three aliquots for lipidomics, cytokine array and Biocrates analysis. This study will focus on lipidomics analysis.","INSTITUTE":"RTI International","DEPARTMENT":"Systems and Translational Sciences (STS)","LABORATORY":"RTI Eastern Regional Comprehensive Metabolomics Resource Core (RTI ERCMRC)","LAST_NAME":"Li","FIRST_NAME":"Yuanyuan","ADDRESS":"3040 East Cornwallis Road, Research Triangle Park, NC 27709, USA","EMAIL":"yli@rti.org","PHONE":"9199908327"},

"STUDY":{"STUDY_TITLE":"Effects of herb DG and KK01 on Type 2 Diabetes Mellitus (T2DM) through Lipidomics","STUDY_TYPE":"LC-MS lipidomics","STUDY_SUMMARY":"According to the results in animal test, KK01 is effective in controlling blood glucose increase with comparable effect as metformin and rosiglitazone. This study will conduct lipid profile comparison for serum samples generated from the animal tests. The comparison will be based on the following groups: 1) db/db mice + DG-high dose; 2) db/db mice +DG-low dose; 3) db/db mice + KK01-high dose; 4) db/db mice + KK01-low dose; 5) db/db mice + metformin; 6) db/db mice + rosiglitazone; 7) db/db mice + saline (disease model); and 8) wild type mice + saline (healthy model). The determined lipid marker(s) will be applied to elucidate the drug target(s) and mechanisms of DG and KK01. Furthermore, comparison of target(s) between KK01 and the first line drugs in diabetic treatment, e.g., metformin and rosiglitazone, will facilitate the finding of featured pathway(s) of KK01 differentiated from the established drugs. Comparison of drug target(s) between KK01 and DG can help to understand the synergistic effects of multiple constituents in the herb.","INSTITUTE":"RTI International","DEPARTMENT":"Systems and Translational Sciences (STS)","LABORATORY":"RTI Eastern Regional Comprehensive Metabolomics Resource Core (RTI RCMRC)","LAST_NAME":"Sumner","FIRST_NAME":"Susan","ADDRESS":"3040 East Cornwallis Road, Research Triangle Park, NC 27709, USA","EMAIL":"ssumner@rti.org","PHONE":"919-541-7479","NUM_GROUPS":"10","TOTAL_SUBJECTS":"93 samples for positive mode and 80 samples for negative mode"},

"SUBJECT":{"SUBJECT_TYPE":"Serum","SUBJECT_SPECIES":"Mus musculus","TAXONOMY_ID":"10090","GENOTYPE_STRAIN":"C57BLKsJ-db/db (disease model) and C57BLKsJ wild type (wild type)","AGE_OR_AGE_RANGE":"14 weeks; drug administration since the 5th week","WEIGHT_OR_WEIGHT_RANGE":"37-58 g for db/db mice; 18-25 g for wild type mice","GENDER":"Male"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"-",
"Sample ID":"S_56",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group1, DG extract high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_53",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group1, DG extract high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_7",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group1, DG extract high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_47",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group1, DG extract high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_19",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group1, DG extract high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_60",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group1, DG extract high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_67",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group1, DG extract high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_34",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group1, DG extract high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_28",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group1, DG extract high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_42",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group1, DG extract high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_25",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 2, DG extract low dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_4",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 2, DG extract low dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_54",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 2, DG extract low dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_16",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 2, DG extract low dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_73",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 2, DG extract low dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_77",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 2, DG extract low dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_38",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 2, DG extract low dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_3",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 2, DG extract low dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_36",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 2, DG extract low dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_57",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 2, DG extract low dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_15",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 3, KK 01 high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_61",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 3, KK 01 high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_20",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 3, KK 01 high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_59",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 3, KK 01 high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_66",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 3, KK 01 high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_48",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 3, KK 01 high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_5",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 3, KK 01 high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_33",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 3, KK 01 high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_76",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 3, KK 01 high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_51",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 3, KK 01 high dose"}
},
{
"Subject ID":"-",
"Sample ID":"S_29",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 4, KK 01 low dose  (i.p.)"}
},
{
"Subject ID":"-",
"Sample ID":"S_43",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 4, KK 01 low dose  (i.p.)"}
},
{
"Subject ID":"-",
"Sample ID":"S_39",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 4, KK 01 low dose  (i.p.)"}
},
{
"Subject ID":"-",
"Sample ID":"S_12",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 4, KK 01 low dose  (i.p.)"}
},
{
"Subject ID":"-",
"Sample ID":"S_50",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 4, KK 01 low dose  (i.p.)"}
},
{
"Subject ID":"-",
"Sample ID":"S_37",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 4, KK 01 low dose  (i.p.)"}
},
{
"Subject ID":"-",
"Sample ID":"S_14",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 4, KK 01 low dose  (i.p.)"}
},
{
"Subject ID":"-",
"Sample ID":"S_79",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 4, KK 01 low dose  (i.p.)"}
},
{
"Subject ID":"-",
"Sample ID":"S_82",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 4, KK 01 low dose  (i.p.)"}
},
{
"Subject ID":"-",
"Sample ID":"S_23",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 4, KK 01 low dose  (i.p.)"}
},
{
"Subject ID":"-",
"Sample ID":"S_74",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 5, metformin"}
},
{
"Subject ID":"-",
"Sample ID":"S_58",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 5, metformin"}
},
{
"Subject ID":"-",
"Sample ID":"S_1",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 5, metformin"}
},
{
"Subject ID":"-",
"Sample ID":"S_8",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 5, metformin"}
},
{
"Subject ID":"-",
"Sample ID":"S_49",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 5, metformin"}
},
{
"Subject ID":"-",
"Sample ID":"S_13",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 5, metformin"}
},
{
"Subject ID":"-",
"Sample ID":"S_75",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 5, metformin"}
},
{
"Subject ID":"-",
"Sample ID":"S_44",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 5, metformin"}
},
{
"Subject ID":"-",
"Sample ID":"S_71",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 5, metformin"}
},
{
"Subject ID":"-",
"Sample ID":"S_52",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 6,  rosiglitazone"}
},
{
"Subject ID":"-",
"Sample ID":"S_21",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 6,  rosiglitazone"}
},
{
"Subject ID":"-",
"Sample ID":"S_65",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 6,  rosiglitazone"}
},
{
"Subject ID":"-",
"Sample ID":"S_32",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 6,  rosiglitazone"}
},
{
"Subject ID":"-",
"Sample ID":"S_72",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 6,  rosiglitazone"}
},
{
"Subject ID":"-",
"Sample ID":"S_69",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 6,  rosiglitazone"}
},
{
"Subject ID":"-",
"Sample ID":"S_2",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 6,  rosiglitazone"}
},
{
"Subject ID":"-",
"Sample ID":"S_45",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 6,  rosiglitazone"}
},
{
"Subject ID":"-",
"Sample ID":"S_46",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 6,  rosiglitazone"}
},
{
"Subject ID":"-",
"Sample ID":"S_18",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 6,  rosiglitazone"}
},
{
"Subject ID":"-",
"Sample ID":"S_62",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 7,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_24",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 7,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_40",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 7,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_27",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 7,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_64",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 7,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_41",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 7,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_68",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 7,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_70",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 7,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_22",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 7,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_17",
"Factors":{"Gene type":"C57BLKsJ (WT)","Phenotypic grouping and treaments":"Group 8,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_78",
"Factors":{"Gene type":"C57BLKsJ (WT)","Phenotypic grouping and treaments":"Group 8,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_9",
"Factors":{"Gene type":"C57BLKsJ (WT)","Phenotypic grouping and treaments":"Group 8,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_55",
"Factors":{"Gene type":"C57BLKsJ (WT)","Phenotypic grouping and treaments":"Group 8,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_11",
"Factors":{"Gene type":"C57BLKsJ (WT)","Phenotypic grouping and treaments":"Group 8,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_30",
"Factors":{"Gene type":"C57BLKsJ (WT)","Phenotypic grouping and treaments":"Group 8,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_6",
"Factors":{"Gene type":"C57BLKsJ (WT)","Phenotypic grouping and treaments":"Group 8,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_80",
"Factors":{"Gene type":"C57BLKsJ (WT)","Phenotypic grouping and treaments":"Group 8,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_63",
"Factors":{"Gene type":"C57BLKsJ (WT)","Phenotypic grouping and treaments":"Group 8,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_26",
"Factors":{"Gene type":"C57BLKsJ (WT)","Phenotypic grouping and treaments":"Group 8,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_35",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 8,  saline"}
},
{
"Subject ID":"-",
"Sample ID":"S_81",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 9,  saline (i.p.)"}
},
{
"Subject ID":"-",
"Sample ID":"S_10",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 9,  saline (i.p.)"}
},
{
"Subject ID":"-",
"Sample ID":"S_83",
"Factors":{"Gene type":"C57BLKsJ-db/db","Phenotypic grouping and treaments":"Group 9,  saline (i.p.)"}
},
{
"Subject ID":"-",
"Sample ID":"P_1",
"Factors":{"Gene type":"Pool serum from Sigma","Phenotypic grouping and treaments":"-"}
},
{
"Subject ID":"-",
"Sample ID":"P_2",
"Factors":{"Gene type":"Pool serum from Sigma","Phenotypic grouping and treaments":"-"}
},
{
"Subject ID":"-",
"Sample ID":"P_3",
"Factors":{"Gene type":"Pool serum from Sigma","Phenotypic grouping and treaments":"-"}
},
{
"Subject ID":"-",
"Sample ID":"P_4",
"Factors":{"Gene type":"Pool serum from Sigma","Phenotypic grouping and treaments":"-"}
},
{
"Subject ID":"-",
"Sample ID":"P_5",
"Factors":{"Gene type":"Pool serum from Sigma","Phenotypic grouping and treaments":"-"}
},
{
"Subject ID":"-",
"Sample ID":"P_6",
"Factors":{"Gene type":"Pool serum from Sigma","Phenotypic grouping and treaments":"-"}
},
{
"Subject ID":"-",
"Sample ID":"P_7",
"Factors":{"Gene type":"Pool serum from Sigma","Phenotypic grouping and treaments":"-"}
},
{
"Subject ID":"-",
"Sample ID":"P_8",
"Factors":{"Gene type":"Pool serum from Sigma","Phenotypic grouping and treaments":"-"}
},
{
"Subject ID":"-",
"Sample ID":"P_9",
"Factors":{"Gene type":"Pool serum from Sigma","Phenotypic grouping and treaments":"-"}
},
{
"Subject ID":"-",
"Sample ID":"P_10",
"Factors":{"Gene type":"Pool serum from Sigma","Phenotypic grouping and treaments":"-"}
},
{
"Subject ID":"-",
"Sample ID":"P_11",
"Factors":{"Gene type":"Pool serum from Sigma","Phenotypic grouping and treaments":"-"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"Mice were fasting over night and then sacrified to collect blood.","SAMPLE_TYPE":"Serum","COLLECTION_LOCATION":"Wuhan Institute of Drug and Device Control, China","STORAGE_CONDITIONS":"Frozen -80oC","COLLECTION_VIALS":"Eppendorf tube 1 mL","STORAGE_VIALS":"Eppendorf tube 0.5 mL","COLLECTION_TUBE_TEMP":"Room temperature","BLOOD_SERUM_OR_PLASMA":"Serum"},

"TREATMENT":{"TREATMENT_SUMMARY":"C57BLKsJ-db/db mice were classified randomly into 8 groups. Seven groups were with 9~10 mice for each and one group with 4 mice. Mice were treated with DG extract (5 g/Kg), DG extract (1 g/Kg), KK01 (50 mg/Kg), KK01 (20 mg/Kg), metformin (5 mg/Kg); rotaglitazone (5 mg/Kg); and saline. Group treated with KK01(20 mg/Kg) and the group with 4 mice treated by saline were used intraperitoneal injection. Other groups were in intragastric administration. Also, a group with ten C57BLKsJ mice fedding with saline was used as healthy control. The drug administration were started with the 5th week of the age and lasted for 9 weeks.","TREATMENT_ROUTE":"Intragastric administration for all except for group of KK01 low-dose (20 mg/Kg), and 4 db/db mice treated with saline which were treated by intraperitoneal injection.","TREATMENT_DOSE":"5 g/Kg for DG high dose; 1 g/Kg for DG low dose; 50 mg/Kg for KK01 high dose; 20 mg/Kg (i.p.) for KK01 low dose; 5 mg/Kg for metformin, 5 mg /Kg for rosiglitazone","TREATMENT_DOSEVOLUME":"0.5 mL","TREATMENT_DOSEDURATION":"9 weeks","TREATMENT_VEHICLE":"saline","ANIMAL_FASTING":"Over night","ANIMAL_ENDP_TISSUE_COLL_LIST":"liver, kidney, brain, white fat, brown fat, pancreas"},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"In lipidomics analysis, samples were first thawed on ice, and then mixed by vortex for 4 min at 4,000 rpm, followed by centrifugation for 4 min at 4, 000 rcf to spin down particulate. Pooled mouse serum from Sigma Aldrich (S7273) were used as QC samples. A 30 µL aliquot of each serum sample (including QC sample and real sample) was transferred to a 2.0 mL Eppendorf Lo-Bind tube and extracted by 600 µL of 2:1 dichloromethane: methanol (DCM) via vortex-mixing for 2 min at 4,000 rpm. Then, 120 µL of H2O was added and repeated the vortex-mixing for 1 min at 4,000 rpm. After placing the sample at room temperature for 10 min, the tube was centrifuged at 16,000 rcf for 10 minutes at 10 °C. A 370 µL aliquot of the lower lipid-rich DCM layer was transferred to a new labeled 2.0 mL Eppendorf Lo-Bind tubes and then lyophilized to complete dryness overnight. For immediate analysis, 300 µL of acetonitrile:isopropanol:H2O (65:30:5, v/v/v) was added to reconstitute the dried tissue extract, and the samples were thoroughly mixed on a multi-tube vortexer for 10 min at 5000 rpm and centrifuged at 16,000 rcf for 4 min. The supernatants were transferred to labeled autosampler vials for data acquisition by LC-MS.","EXTRACTION_METHOD":"cold 2:1 dichloromethane: methanol vortex extraction","EXTRACT_STORAGE":"-80 oC","SAMPLE_RESUSPENSION":"acetonitrile:isopropanol:H2O (65:30:5, v/v/v)","SAMPLE_SPIKING":"1,2-diheptadecanoyl-sn-glycero-3-phosphocholine"},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"Reversed phase","INSTRUMENT_NAME":"Waters Acquity","COLUMN_NAME":"Waters Acquity CSH C18 (100 x 2.1mm, 1.7um)","FLOW_RATE":"0.25 mL/min","COLUMN_TEMPERATURE":"50 oC","SOLVENT_A":"10 Mm Ammonium formate in 60:40 H2O/ Acetonitrile with 0.1% formic acid","SOLVENT_B":"10 mM Ammonium formate in 90:10 Isopropanol/ Acetonitrile with 0.1% formic acid","COLUMN_PRESSURE":"6000-10000","INJECTION_TEMPERATURE":"4 oC","INTERNAL_STANDARD":"1,2-diheptadecanoyl-sn-glycero-3-phosphocholine","ANALYTICAL_TIME":"30 min","WEAK_WASH_SOLVENT_NAME":"60:40 water/acetonitrile in 10 mM ammonium formate with 0.1% formic acid","WEAK_WASH_VOLUME":"1200 uL","STRONG_WASH_SOLVENT_NAME":"90:10 isopropanol/acetonitrile in 10 mM ammonium formate with 0.1% formic acid","STRONG_WASH_VOLUME":"600 uL","SAMPLE_LOOP_SIZE":"10 uL","SAMPLE_SYRINGE_SIZE":"100 uL","RANDOMIZATION_ORDER":"Yes"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS","OPERATOR_NAME":"Yuanyuan Li","DATA_FORMAT":"Profile"},

"MS":{"MS_COMMENTS":"-","INSTRUMENT_NAME":"Thermo Orbitrap","INSTRUMENT_TYPE":"Orbitrap","MS_TYPE":"ESI","ION_MODE":"POSITIVE","CAPILLARY_TEMPERATURE":"250 oC","COLLISION_ENERGY":"35","FRAGMENTATION_METHOD":"CID","ION_SOURCE_TEMPERATURE":"400 oC","ION_SPRAY_VOLTAGE":"4.0 kV","IONIZATION":"ES+","MASS_ACCURACY":"10 ppm","DESOLVATION_GAS_FLOW":"50 arbitary unit","DESOLVATION_TEMPERATURE":"400 oC","RESOLUTION_SETTING":"30000","SCAN_RANGE_MOVERZ":"120-2000 m/s"},

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