{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000563","ANALYSIS_ID":"AN000865","VERSION":"1","CREATED_ON":"February 22, 2017, 4:27 pm"},

"PROJECT":{"PROJECT_TITLE":"Stool and microbial metabolomics","PROJECT_SUMMARY":"Digestive tract metabolomics in the context of diet","INSTITUTE":"The Forsyth Institute","LAST_NAME":"Izard","FIRST_NAME":"Jacques","ADDRESS":"Cambridge, MA","EMAIL":"jizard@forsyth.org","PHONE":"617-892-8279"},

"STUDY":{"STUDY_TITLE":"Meat intake on stool metabolites","STUDY_SUMMARY":"Methods of stool fixation (RNAlater versus ethanol versus no fixative by freezing) influence the ability of metabolite recovery and discovery","INSTITUTE":"University of Michigan","DEPARTMENT":"Biomedical Research Core Facilities","LABORATORY":"Metabolomics core","LAST_NAME":"Kachman","FIRST_NAME":"Maureen","ADDRESS":"6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714","EMAIL":"mkachman@med.umich.edu","PHONE":"734-232-8175"},

"SUBJECT":{"SUBJECT_TYPE":"Human","SUBJECT_SPECIES":"Homo sapiens","TAXONOMY_ID":"9606"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"SU0004153",
"Sample ID":"S00014767",
"Factors":{"Treatment":"None"},
"Additional sample data":{"YOGURT":"2","ALCOHOL":"4","LONG TERM RED MEAT INTAKE":"0.7","SHORT TERM RED MEAT":"2","ANTIBIOTICS":"2"}
},
{
"Subject ID":"SU0004155",
"Sample ID":"S00014772",
"Factors":{"Treatment":"None"},
"Additional sample data":{"YOGURT":"1","ALCOHOL":"3","LONG TERM RED MEAT INTAKE":"0.42","SHORT TERM RED MEAT":"4","ANTIBIOTICS":"2"}
},
{
"Subject ID":"SU0004156",
"Sample ID":"S00014775",
"Factors":{"Treatment":"None"},
"Additional sample data":{"YOGURT":"1","ALCOHOL":"1","LONG TERM RED MEAT INTAKE":"0.57","SHORT TERM RED MEAT":"4","ANTIBIOTICS":"2"}
},
{
"Subject ID":"SU0004157",
"Sample ID":"S00014778",
"Factors":{"Treatment":"None"},
"Additional sample data":{"YOGURT":"3","ALCOHOL":"3","LONG TERM RED MEAT INTAKE":"-","SHORT TERM RED MEAT":"1","ANTIBIOTICS":"2"}
},
{
"Subject ID":"SU0004158",
"Sample ID":"S00014781",
"Factors":{"Treatment":"None"},
"Additional sample data":{"YOGURT":"2","ALCOHOL":"2","LONG TERM RED MEAT INTAKE":"0.35","SHORT TERM RED MEAT":"1","ANTIBIOTICS":"2"}
},
{
"Subject ID":"SU0004159",
"Sample ID":"S00014784",
"Factors":{"Treatment":"None"},
"Additional sample data":{"YOGURT":"4","ALCOHOL":"2","LONG TERM RED MEAT INTAKE":"-","SHORT TERM RED MEAT":"1","ANTIBIOTICS":"2"}
},
{
"Subject ID":"SU0004161",
"Sample ID":"S00014788",
"Factors":{"Treatment":"None"},
"Additional sample data":{"YOGURT":"1","ALCOHOL":"2","LONG TERM RED MEAT INTAKE":"1.14","SHORT TERM RED MEAT":"4","ANTIBIOTICS":"2"}
},
{
"Subject ID":"SU0004162",
"Sample ID":"S00014791",
"Factors":{"Treatment":"None"},
"Additional sample data":{"YOGURT":"2","ALCOHOL":"1","LONG TERM RED MEAT INTAKE":"1.06","SHORT TERM RED MEAT":"4","ANTIBIOTICS":"1"}
},
{
"Subject ID":"SU0004163",
"Sample ID":"S00014794",
"Factors":{"Treatment":"None"},
"Additional sample data":{"YOGURT":"4","ALCOHOL":"4","LONG TERM RED MEAT INTAKE":"1.06","SHORT TERM RED MEAT":"4","ANTIBIOTICS":"1"}
},
{
"Subject ID":"SU0004164",
"Sample ID":"S00014797",
"Factors":{"Treatment":"None"},
"Additional sample data":{"YOGURT":"2","ALCOHOL":"3","LONG TERM RED MEAT INTAKE":"0.21","SHORT TERM RED MEAT":"1","ANTIBIOTICS":"2"}
},
{
"Subject ID":"SU0004165",
"Sample ID":"S00014799",
"Factors":{"Treatment":"None"},
"Additional sample data":{"YOGURT":"2","ALCOHOL":"4","LONG TERM RED MEAT INTAKE":"0.28","SHORT TERM RED MEAT":"3","ANTIBIOTICS":"2"}
},
{
"Subject ID":"SU0004166",
"Sample ID":"S00014802",
"Factors":{"Treatment":"None"},
"Additional sample data":{"YOGURT":"2","ALCOHOL":"3","LONG TERM RED MEAT INTAKE":"1.63","SHORT TERM RED MEAT":"3","ANTIBIOTICS":"2"}
},
{
"Subject ID":"SU9999996",
"Sample ID":"S00017887",
"Factors":{"Treatment":"None"},
"Additional sample data":{"YOGURT":"Pooled","ALCOHOL":"Pooled","LONG TERM RED MEAT INTAKE":"Pooled","SHORT TERM RED MEAT":"Pooled","ANTIBIOTICS":"Pooled"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"None","SAMPLE_TYPE":"Feces"},

"TREATMENT":{"TREATMENT_SUMMARY":"None"},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"None","SAMPLEPREP_PROTOCOL_FILENAME":"ShortChainFattyAcids-20150305.docx"},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_SUMMARY":"None","CHROMATOGRAPHY_TYPE":"GC","INSTRUMENT_NAME":"Agilent 7890A","COLUMN_NAME":"Phenomenex Zebron ZB-WAXplus (30m x 0.25mm, 0.25um)","METHODS_FILENAME":"WAXPLUS_100-200C_2_SIM.M","METHODS_ID":"AQM030"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS"},

"MS":{"MS_COMMENTS":"-","INSTRUMENT_NAME":"Agilent 5975C","INSTRUMENT_TYPE":"Single quadrupole","MS_TYPE":"EI","ION_MODE":"POSITIVE"},

"MS_METABOLITE_DATA":{
"Units":"nmol/mg sample",

"Data":[{"Metabolite":"acetic acid","S00014767":"7.791","S00014772":"11.824","S00014775":"14.404","S00014778":"5.579","S00014781":"11.194","S00014784":"22.995","S00014788":"2.438","S00014791":"10.559","S00014794":"7.334","S00014797":"8.986","S00014799":"2.452","S00014802":"3.551","S00017887":"817.858"},{"Metabolite":"butyric acid","S00014767":"3.336","S00014772":"1.326","S00014775":"6.100","S00014778":"1.894","S00014781":"2.613","S00014784":"12.625","S00014788":"2.049","S00014791":"5.675","S00014794":"3.173","S00014797":"9.809","S00014799":"1.912","S00014802":"1.594","S00017887":"366.782"},{"Metabolite":"heptanoic acid","S00014767":"0.815","S00014772":"0.227","S00014775":"0.207","S00014778":"0.160","S00014781":"0.195","S00014784":"0.258","S00014788":"0.099","S00014791":"0.005","S00014794":"0.503","S00014797":"0.554","S00014799":"0.212","S00014802":"0.043","S00017887":"16.746"},{"Metabolite":"hexanoic acid","S00014767":"0.489","S00014772":"0.213","S00014775":"0.268","S00014778":"0.234","S00014781":"0.425","S00014784":"0.200","S00014788":"0.387","S00014791":"0.232","S00014794":"0.361","S00014797":"0.676","S00014799":"0.286","S00014802":"0.238","S00017887":"22.473"},{"Metabolite":"isovaleric acid","S00014767":"1.644","S00014772":"0.980","S00014775":"2.927","S00014778":"1.176","S00014781":"1.532","S00014784":"5.834","S00014788":"1.093","S00014791":"2.724","S00014794":"1.907","S00014797":"4.628","S00014799":"1.116","S00014802":"0.965","S00017887":"179.457"},{"Metabolite":"propionic acid","S00014767":"2.627","S00014772":"2.387","S00014775":"4.211","S00014778":"1.831","S00014781":"4.042","S00014784":"4.375","S00014788":"2.161","S00014791":"5.995","S00014794":"1.816","S00014797":"5.482","S00014799":"0.894","S00014802":"1.230","S00017887":"274.286"},{"Metabolite":"valeric acid","S00014767":"0.598","S00014772":"0.234","S00014775":"0.256","S00014778":"0.577","S00014781":"0.670","S00014784":"0.141","S00014788":"0.580","S00014791":"0.396","S00014794":"0.417","S00014797":"0.408","S00014799":"0.422","S00014802":"0.618","S00017887":"30.013"}],

"Metabolites":[{"Metabolite":"acetic acid","PubChem CID":"176","Local ID":"Acetate"},{"Metabolite":"propionic acid","PubChem CID":"1032","Local ID":"Propionate"},{"Metabolite":"butyric acid","PubChem CID":"20975673","Local ID":"Butyrate"},{"Metabolite":"isovaleric acid","PubChem CID":"10430","Local ID":"Isovalerate"},{"Metabolite":"valeric acid","PubChem CID":"7991","Local ID":"Valerate"},{"Metabolite":"hexanoic acid","PubChem CID":"8892","Local ID":"Hexanoate"},{"Metabolite":"heptanoic acid","PubChem CID":"8094","Local ID":"Heptanoate"}]
}

}