{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000699","ANALYSIS_ID":"AN001087","VERSION":"1","CREATED_ON":"July 1, 2017, 4:55 pm"},

"PROJECT":{"PROJECT_TITLE":"Comparative Vitreous Analysis","PROJECT_TYPE":"MS analysis","PROJECT_SUMMARY":"Human vitreous collected in OR","INSTITUTE":"University of Michigan","DEPARTMENT":"Ophthalmology","LABORATORY":"Gardner","LAST_NAME":"Gardner","FIRST_NAME":"Thomas","ADDRESS":"Ann Arbor, MI","EMAIL":"tomwgard@umich.edu","PHONE":"734-232-8283"},

"STUDY":{"STUDY_TITLE":"Human vitreous amino acid & lipid analysis","STUDY_TYPE":"MS analysis","STUDY_SUMMARY":"Human vitreous was collected in the OR at time of indicated surgery. No treatments were involved. Diagnoses are: epiretinal membranes (ERM); proliferative diabetic retinopathy (PDR); retinal detachment (RD)","INSTITUTE":"University of Michigan","DEPARTMENT":"Biomedical Research Core Facilities","LABORATORY":"Metabolomics core","LAST_NAME":"Kachman","FIRST_NAME":"Maureen","ADDRESS":"6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714","EMAIL":"mkachman@med.umich.edu","PHONE":"(734) 232-8175","NUM_GROUPS":"3","TOTAL_SUBJECTS":"3"},

"SUBJECT":{"SUBJECT_TYPE":"Human","SUBJECT_SPECIES":"Homo sapiens","TAXONOMY_ID":"9606"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"SU0012423",
"Sample ID":"S00018821",
"Factors":{"Diagnosis":"ERM"}
},
{
"Subject ID":"SU0012423",
"Sample ID":"S00018822",
"Factors":{"Diagnosis":"ERM"}
},
{
"Subject ID":"SU0012423",
"Sample ID":"S00018823",
"Factors":{"Diagnosis":"ERM"}
},
{
"Subject ID":"SU0012423",
"Sample ID":"S00018824",
"Factors":{"Diagnosis":"ERM"}
},
{
"Subject ID":"SU0012423",
"Sample ID":"S00018825",
"Factors":{"Diagnosis":"ERM"}
},
{
"Subject ID":"SU0012424",
"Sample ID":"S00018826",
"Factors":{"Diagnosis":"PDR"}
},
{
"Subject ID":"SU0012424",
"Sample ID":"S00018827",
"Factors":{"Diagnosis":"PDR"}
},
{
"Subject ID":"SU0012424",
"Sample ID":"S00018828",
"Factors":{"Diagnosis":"PDR"}
},
{
"Subject ID":"SU0012424",
"Sample ID":"S00018829",
"Factors":{"Diagnosis":"PDR"}
},
{
"Subject ID":"SU0012425",
"Sample ID":"S00018830",
"Factors":{"Diagnosis":"RD"}
},
{
"Subject ID":"SU0012425",
"Sample ID":"S00018831",
"Factors":{"Diagnosis":"RD"}
},
{
"Subject ID":"SU0012425",
"Sample ID":"S00018832",
"Factors":{"Diagnosis":"RD"}
},
{
"Subject ID":"SU0012425",
"Sample ID":"S00018833",
"Factors":{"Diagnosis":"RD"}
},
{
"Subject ID":"SU0012425",
"Sample ID":"S00018834",
"Factors":{"Diagnosis":"RD"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"-"},

"TREATMENT":{"TREATMENT_SUMMARY":"-"},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"-","SAMPLEPREP_PROTOCOL_FILENAME":"A004 - Shotgun Lipidomics.pdf"},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"GC","INSTRUMENT_NAME":"Agilent 7890N","COLUMN_NAME":"Phenomenex Zebron ZB-AAA Amino Acid Analysis 10m x 0.25mm"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS","ANALYSIS_PROTOCOL_FILE":"A005 - Amino Acids.pdf"},

"MS":{"MS_COMMENTS":"-","INSTRUMENT_NAME":"Agilent 5975","INSTRUMENT_TYPE":"Single quadrupole","MS_TYPE":"EI","ION_MODE":"POSITIVE"},

"MS_METABOLITE_DATA":{
"Units":"uM",

"Data":[{"Metabolite":"SARCOSINE","S00018821":"","S00018822":"","S00018823":"","S00018824":"","S00018825":".203038158","S00018826":"","S00018827":"","S00018828":"","S00018829":"","S00018830":"","S00018831":"","S00018832":".177928813","S00018833":".034883882","S00018834":".310595132"},{"Metabolite":"L-PROLINE","S00018821":"7.062115984","S00018822":"29.33464394","S00018823":"5.634530694","S00018824":"8.369700567","S00018825":"69.79815391","S00018826":"26.37745179","S00018827":"99.14856487","S00018828":"55.76363095","S00018829":"20.48867674","S00018830":"16.68818551","S00018831":"7.095732106","S00018832":"13.62761937","S00018833":"6.399972155","S00018834":"7.822802194"},{"Metabolite":"L-GLUTAMIC 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"Metabolites":[{"Metabolite":"SARCOSINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"1088","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-PROLINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"145742","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-GLUTAMIC ACID","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"33032","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-ALANINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"5950","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-SERINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"5951","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-ASPARTIC ACID","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"5960","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-GLUTAMINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"5961","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-LYSINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"5962","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-TYROSINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"6057","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-LEUCINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"6106","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"2-AMINOISOBUTYRIC ACID","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"6119","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-METHIONINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"6137","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-PHENYLALANINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"6140","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-ORNITHINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"6262","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-ASPARAGINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"6267","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-HISTIDINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"6274","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-VALINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"6287","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-THREONINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"6288","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-TRYPTOPHAN","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"6305","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"L-ISOLEUCINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"6306","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"GLYCINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"750","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"4-HYDROXYPROLINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"825","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""}]
}

}