{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000727","ANALYSIS_ID":"AN001140","VERSION":"1","CREATED_ON":"July 2, 2017, 10:19 pm"},

"PROJECT":{"PROJECT_TITLE":"Bariatric Surgery and Breast Cancer","PROJECT_TYPE":"MS analysis","PROJECT_SUMMARY":"Measure Short chain Fatty Acids in colon","INSTITUTE":"University of Michigan","DEPARTMENT":"Surgery","LABORATORY":"Seeley Lab","LAST_NAME":"Seeley","FIRST_NAME":"Randy","ADDRESS":"Ann Arbor, MI","EMAIL":"seeleyrj@umich.edu","PHONE":"734-615-2880"},

"STUDY":{"STUDY_TITLE":"Bariatric surgery and breast cancer","STUDY_TYPE":"MS analysis","STUDY_SUMMARY":"This is a double blind study, to measure short chain fatty acids in colons of mouse that have gone through bariatric surgery and the mouse that have gone through sham surgery (as control group). We would like to get a ratio of different types of fatty acids in the colons of these animals. This project looks at the effects of bariatric surgery on short chain fatty acids produced by microbiota ultimately the effects on the growth and suppression of breast cancer.","INSTITUTE":"University of Michigan","DEPARTMENT":"Biomedical Research Core Facilities","LABORATORY":"Metabolomics core","LAST_NAME":"Kachman","FIRST_NAME":"Maureen","ADDRESS":"6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714","EMAIL":"mkachman@med.umich.edu","PHONE":"(734) 232-8175","NUM_GROUPS":"2","TOTAL_SUBJECTS":"27"},

"SUBJECT":{"SUBJECT_TYPE":"Mouse","SUBJECT_SPECIES":"Mus musculus","TAXONOMY_ID":"10090"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"SU0013476",
"Sample ID":"S00020243",
"Factors":{"Treatment":"Sham"}
},
{
"Subject ID":"SU0013477",
"Sample ID":"S00020244",
"Factors":{"Treatment":"Sham"}
},
{
"Subject ID":"SU0013478",
"Sample ID":"S00020245",
"Factors":{"Treatment":"Sham"}
},
{
"Subject ID":"SU0013479",
"Sample ID":"S00020246",
"Factors":{"Treatment":"Sham"}
},
{
"Subject ID":"SU0013480",
"Sample ID":"S00020247",
"Factors":{"Treatment":"Sham"}
},
{
"Subject ID":"SU0013481",
"Sample ID":"S00020248",
"Factors":{"Treatment":"Sham"}
},
{
"Subject ID":"SU0013482",
"Sample ID":"S00020249",
"Factors":{"Treatment":"Sham"}
},
{
"Subject ID":"SU0013483",
"Sample ID":"S00020250",
"Factors":{"Treatment":"Sham"}
},
{
"Subject ID":"SU0013484",
"Sample ID":"S00020251",
"Factors":{"Treatment":"Sham"}
},
{
"Subject ID":"SU0013485",
"Sample ID":"S00020252",
"Factors":{"Treatment":"Sham"}
},
{
"Subject ID":"SU0013486",
"Sample ID":"S00020253",
"Factors":{"Treatment":"Sham"}
},
{
"Subject ID":"SU0013487",
"Sample ID":"S00020254",
"Factors":{"Treatment":"Sham"}
},
{
"Subject ID":"SU0013488",
"Sample ID":"S00020255",
"Factors":{"Treatment":"Sham"}
},
{
"Subject ID":"SU0013489",
"Sample ID":"S00020256",
"Factors":{"Treatment":"Sham"}
},
{
"Subject ID":"SU0013490",
"Sample ID":"S00020257",
"Factors":{"Treatment":"Sham"}
},
{
"Subject ID":"SU0013491",
"Sample ID":"S00020258",
"Factors":{"Treatment":"VSG"}
},
{
"Subject ID":"SU0013492",
"Sample ID":"S00020259",
"Factors":{"Treatment":"VSG"}
},
{
"Subject ID":"SU0013493",
"Sample ID":"S00020260",
"Factors":{"Treatment":"VSG"}
},
{
"Subject ID":"SU0013494",
"Sample ID":"S00020261",
"Factors":{"Treatment":"VSG"}
},
{
"Subject ID":"SU0013495",
"Sample ID":"S00020262",
"Factors":{"Treatment":"VSG"}
},
{
"Subject ID":"SU0013496",
"Sample ID":"S00020263",
"Factors":{"Treatment":"VSG"}
},
{
"Subject ID":"SU0013497",
"Sample ID":"S00020264",
"Factors":{"Treatment":"VSG"}
},
{
"Subject ID":"SU0013498",
"Sample ID":"S00020265",
"Factors":{"Treatment":"VSG"}
},
{
"Subject ID":"SU0013499",
"Sample ID":"S00020266",
"Factors":{"Treatment":"VSG"}
},
{
"Subject ID":"SU0013500",
"Sample ID":"S00020267",
"Factors":{"Treatment":"VSG"}
},
{
"Subject ID":"SU0013501",
"Sample ID":"S00020268",
"Factors":{"Treatment":"VSG"}
},
{
"Subject ID":"SU0013502",
"Sample ID":"S00020269",
"Factors":{"Treatment":"VSG"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"-"},

"TREATMENT":{"TREATMENT_SUMMARY":"-"},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"-","SAMPLEPREP_PROTOCOL_FILENAME":"A007 - Short Chain Fatty Acids.pdf"},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"GC","INSTRUMENT_NAME":"Agilent 7890N","COLUMN_NAME":"Phenomenex Zebron ZB-WAXplus (30m x 0.25mm, 0.25um)"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS","ANALYSIS_PROTOCOL_FILE":"A007 - Short Chain Fatty Acids.pdf"},

"MS":{"MS_COMMENTS":"-","INSTRUMENT_NAME":"Agilent 5975","INSTRUMENT_TYPE":"Single quadrupole","MS_TYPE":"EI","ION_MODE":"POSITIVE"},

"MS_METABOLITE_DATA":{
"Units":"pmol/mg",

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}

}