{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000828","ANALYSIS_ID":"AN001835","VERSION":"1","CREATED_ON":"January 15, 2019, 12:36 pm"},

"PROJECT":{"PROJECT_TITLE":"Metabolic regulation by PARP-1 in myofibroblast differentiation and fibrosis","PROJECT_TYPE":"MS analysis","PROJECT_SUMMARY":"Analysis of wild type lung tissue after saline or bleomycin treatment","INSTITUTE":"University of Michigan","DEPARTMENT":"Deaprtment of Pathology","LABORATORY":"Sem H. Phan","LAST_NAME":"Hu","FIRST_NAME":"Biao","ADDRESS":"Ann Arbor, MI","EMAIL":"biaohu@med.umich.edu","PHONE":"734-7635731"},

"STUDY":{"STUDY_TITLE":"Metabolic analysis of Parp1 ko/wt Saline & Bleo Mouse Lung Fiboblasts and Human IPF & Normal Lung Fiboblasts 3","STUDY_TYPE":"MS analysis","STUDY_SUMMARY":"Glycolysis/TCA/Nucleotide analysis (especially interested in alpha-ketoglutarate) and NAD+ and related metabolite analysis for all samples","INSTITUTE":"University of Michigan","DEPARTMENT":"Biomedical Research Core Facilities","LABORATORY":"Metabolomics core","LAST_NAME":"Kachman","FIRST_NAME":"Maureen","ADDRESS":"6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714","EMAIL":"mkachman@med.umich.edu","PHONE":"(734) 232-8175","NUM_GROUPS":"6","TOTAL_SUBJECTS":"16"},

"SUBJECT":{"SUBJECT_TYPE":"HUMAN","SUBJECT_SPECIES":"Homo sapiens","TAXONOMY_ID":"9606"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"SU0004492",
"Sample ID":"S00015469",
"Factors":{"Sample type":"Tissues","Species":"Mus musculus","bleomycin/IPF":"N","saline/HLF":"Y","wt B6":"Y"}
},
{
"Subject ID":"SU0004493",
"Sample ID":"S00015470",
"Factors":{"Sample type":"Tissues","Species":"Mus musculus","bleomycin/IPF":"N","saline/HLF":"Y","wt B6":"Y"}
},
{
"Subject ID":"SU0004494",
"Sample ID":"S00015471",
"Factors":{"Sample type":"Tissues","Species":"Mus musculus","bleomycin/IPF":"Y","saline/HLF":"N","wt B6":"Y"}
},
{
"Subject ID":"SU0004495",
"Sample ID":"S00015472",
"Factors":{"Sample type":"Tissues","Species":"Mus musculus","bleomycin/IPF":"Y","saline/HLF":"N","wt B6":"Y"}
},
{
"Subject ID":"SU0004496",
"Sample ID":"S00015473",
"Factors":{"Sample type":"Tissues","Species":"Mus musculus","bleomycin/IPF":"Y","saline/HLF":"N","wt B6":"Y"}
},
{
"Subject ID":"SU0004497",
"Sample ID":"S00015474",
"Factors":{"Sample type":"Tissues","Species":"Mus musculus","bleomycin/IPF":"Y","saline/HLF":"N","wt B6":"Y"}
},
{
"Subject ID":"SU0004498",
"Sample ID":"S00015475",
"Factors":{"Sample type":"Cells","Species":"Homo sapiens","bleomycin/IPF":"N","saline/HLF":"Y","wt B6":"N"}
},
{
"Subject ID":"SU0004499",
"Sample ID":"S00015476",
"Factors":{"Sample type":"Cells","Species":"Homo sapiens","bleomycin/IPF":"N","saline/HLF":"Y","wt B6":"N"}
},
{
"Subject ID":"SU0004500",
"Sample ID":"S00015477",
"Factors":{"Sample type":"Cells","Species":"Homo sapiens","bleomycin/IPF":"N","saline/HLF":"Y","wt B6":"N"}
},
{
"Subject ID":"SU0004501",
"Sample ID":"S00015478",
"Factors":{"Sample type":"Cells","Species":"Homo sapiens","bleomycin/IPF":"N","saline/HLF":"Y","wt B6":"N"}
},
{
"Subject ID":"SU0004502",
"Sample ID":"S00015479",
"Factors":{"Sample type":"Cells","Species":"Homo sapiens","bleomycin/IPF":"N","saline/HLF":"Y","wt B6":"N"}
},
{
"Subject ID":"SU0004503",
"Sample ID":"S00015480",
"Factors":{"Sample type":"Cells","Species":"Homo sapiens","bleomycin/IPF":"Y","saline/HLF":"N","wt B6":"N"}
},
{
"Subject ID":"SU0004504",
"Sample ID":"S00015481",
"Factors":{"Sample type":"Cells","Species":"Homo sapiens","bleomycin/IPF":"Y","saline/HLF":"N","wt B6":"N"}
},
{
"Subject ID":"SU0004505",
"Sample ID":"S00015482",
"Factors":{"Sample type":"Cells","Species":"Homo sapiens","bleomycin/IPF":"Y","saline/HLF":"N","wt B6":"N"}
},
{
"Subject ID":"SU0004506",
"Sample ID":"S00015483",
"Factors":{"Sample type":"Cells","Species":"Homo sapiens","bleomycin/IPF":"Y","saline/HLF":"N","wt B6":"N"}
},
{
"Subject ID":"SU0004507",
"Sample ID":"S00015484",
"Factors":{"Sample type":"Cells","Species":"Homo sapiens","bleomycin/IPF":"Y","saline/HLF":"N","wt B6":"N"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"-","SAMPLE_TYPE":"Cultured cells"},

"TREATMENT":{"TREATMENT_SUMMARY":"-"},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"-","SAMPLEPREP_PROTOCOL_FILENAME":"A010-Ceramides.pdf"},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"Phenyl","INSTRUMENT_NAME":"Agilent","COLUMN_NAME":"Pinnacle DB Biphenyl, 140A, 1.9mkm, 2.1mm X 50mm (Restek)"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS","ANALYSIS_PROTOCOL_FILE":"A010-Ceramides.pdf","ACQUISITION_PARAMETERS_FILE":"QM033_2mmC18_Ceramide_MRM"},

"MS":{"INSTRUMENT_NAME":"Agilent 6490A QQQ","INSTRUMENT_TYPE":"Triple quadrupole","MS_TYPE":"ESI","ION_MODE":"POSITIVE","MS_COMMENTS":"none"},

"MS_METABOLITE_DATA":{
"Units":"uM",

"Data":[{"Metabolite":"C14 CER","S00015469":"13.18467456","S00015470":"11.3554499","S00015471":"16.71693126","S00015472":"17.5211094","S00015473":"14.99545025","S00015474":"16.52230241","S00015475":"4.341071808","S00015476":"4.523389516","S00015477":"3.910946385","S00015478":"3.72642603","S00015479":"3.686349582","S00015480":"2.567389296","S00015481":"2.579638735","S00015482":"3.295066866","S00015483":"3.169451064","S00015484":"2.82618964"},{"Metabolite":"N-(OLEOYL)-CERAMIDE","S00015469":"60.09308441","S00015470":"56.13348308","S00015471":"79.88984208","S00015472":"80.01543077","S00015473":"47.18888104","S00015474":"52.99986529","S00015475":"8.563245435","S00015476":"8.477443107","S00015477":"8.287113223","S00015478":"8.085358","S00015479":"8.100988521","S00015480":"7.322380042","S00015481":"7.567238928","S00015482":"7.561450824","S00015483":"7.569146526","S00015484":"7.309183262"},{"Metabolite":"N-PALMITOYLSPHINGOSINE","S00015469":"3589.962036","S00015470":"3102.803433","S00015471":"5239.218675","S00015472":"4368.8023","S00015473":"2968.105857","S00015474":"3291.572604","S00015475":"111.2430941","S00015476":"134.7340545","S00015477":"102.0941312","S00015478":"106.2026024","S00015479":"96.60617206","S00015480":"129.5525361","S00015481":"121.4395177","S00015482":"158.712242","S00015483":"153.9979781","S00015484":"138.7477852"},{"Metabolite":"N-STEAROYLSPHINGOSINE","S00015469":"541.0739629","S00015470":"408.8605058","S00015471":"688.209609","S00015472":"530.1515236","S00015473":"523.4719251","S00015474":"650.0436023","S00015475":"6.172734398","S00015476":"8.660236358","S00015477":"6.583264455","S00015478":"6.456199665","S00015479":"5.610454373","S00015480":"3.182783523","S00015481":"2.541264579","S00015482":"3.43938129","S00015483":"3.66297448","S00015484":"3.129887079"},{"Metabolite":"N-ICOSANOYLSPHINGOSINE","S00015469":"842.957053","S00015470":"842.3758328","S00015471":"982.6844946","S00015472":"833.68724","S00015473":"916.7110151","S00015474":"1578.309097","S00015475":"7.319720471","S00015476":"8.581557899","S00015477":"7.358170248","S00015478":"6.659164131","S00015479":"6.719343166","S00015480":"6.324317278","S00015481":"5.929982975","S00015482":"6.889094001","S00015483":"7.170088474","S00015484":"6.964446368"},{"Metabolite":"C24 CER","S00015469":"1279.74824","S00015470":"1379.284799","S00015471":"542.9248375","S00015472":"1478.376646","S00015473":"1147.90664","S00015474":"1505.891429","S00015475":"130.060554","S00015476":"159.1229516","S00015477":"308.3833215","S00015478":"112.5124306","S00015479":"292.9832778","S00015480":"32.53552938","S00015481":"30.83932337","S00015482":"37.78045285","S00015483":"41.90340042","S00015484":"35.88320168"}],

"Metabolites":[{"Metabolite":"C14 CER","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"5282310","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"N-(OLEOYL)-CERAMIDE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"5283563","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"N-PALMITOYLSPHINGOSINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"5283564","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"N-STEAROYLSPHINGOSINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"5283565","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"N-ICOSANOYLSPHINGOSINE","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"5283566","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""},{"Metabolite":"C24 CER","moverz_quant":"","ri":"","ri_type":"","pubchem_id":"5283571","inchi_key":"","kegg_id":"","other_id":"","other_id_type":""}]
}

}