{
"METABOLOMICS WORKBENCH":{"STUDY_ID":"ST000830","ANALYSIS_ID":"AN001323","VERSION":"1","CREATED_ON":"August 8, 2017, 12:26 pm"},

"PROJECT":{"PROJECT_TITLE":"CD47 (integrin associated protein) metabolomics","PROJECT_TYPE":"MS analysis","PROJECT_SUMMARY":"CD47 WT/KO quad/serum (RNAseq mice)","INSTITUTE":"University of Michigan","DEPARTMENT":"Metabolism, Endo & Diabetes","LABORATORY":"Chun Lab","LAST_NAME":"Chun","FIRST_NAME":"Taehwa","ADDRESS":"Ann Arbor, MI","EMAIL":"taehwa@med.umich.edu","PHONE":"734-763-3056"},

"STUDY":{"STUDY_TITLE":"CD47 WT/KO muscle and serum acyl-carnitine assay","STUDY_TYPE":"MS analysis","STUDY_SUMMARY":"These mice were fed a high-fat diet for 3 weeks, fast for 5 hours, dissected, and quadriceps were snap-frozen in LN2.","INSTITUTE":"University of Michigan","DEPARTMENT":"Biomedical Research Core Facilities","LABORATORY":"Metabolomics core","LAST_NAME":"Kachman","FIRST_NAME":"Maureen","ADDRESS":"6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714","EMAIL":"mkachman@med.umich.edu","PHONE":"(734) 232-8175","NUM_GROUPS":"7","TOTAL_SUBJECTS":"9"},

"SUBJECT":{"SUBJECT_TYPE":"MOUSE","SUBJECT_SPECIES":"Mus musculus","TAXONOMY_ID":"10090"},
"SUBJECT_SAMPLE_FACTORS":[
{
"Subject ID":"SU0013199",
"Sample ID":"S00019644",
"Factors":{"Sample type":"Quadriceps Muscle","Type":"WT"}
},
{
"Subject ID":"SU0013200",
"Sample ID":"S00019645",
"Factors":{"Sample type":"Quadriceps Muscle","Type":"WT"}
},
{
"Subject ID":"SU0013201",
"Sample ID":"S00019646",
"Factors":{"Sample type":"Quadriceps Muscle","Type":"WT"}
},
{
"Subject ID":"SU0013202",
"Sample ID":"S00019647",
"Factors":{"Sample type":"Quadriceps Muscle","Type":"WT"}
},
{
"Subject ID":"SU0013203",
"Sample ID":"S00019648",
"Factors":{"Sample type":"Quadriceps Muscle","Type":"KO"}
},
{
"Subject ID":"SU0013204",
"Sample ID":"S00019649",
"Factors":{"Sample type":"Quadriceps Muscle","Type":"KO"}
},
{
"Subject ID":"SU0013205",
"Sample ID":"S00019650",
"Factors":{"Sample type":"Quadriceps Muscle","Type":"KO"}
},
{
"Subject ID":"SU0013206",
"Sample ID":"S00019651",
"Factors":{"Sample type":"Quadriceps Muscle","Type":"KO"}
},
{
"Subject ID":"SU0013199",
"Sample ID":"S00019652",
"Factors":{"Sample type":"Serum","Type":"WT"}
},
{
"Subject ID":"SU0013200",
"Sample ID":"S00019653",
"Factors":{"Sample type":"Serum","Type":"WT"}
},
{
"Subject ID":"SU0013201",
"Sample ID":"S00019654",
"Factors":{"Sample type":"Serum","Type":"WT"}
},
{
"Subject ID":"SU0013202",
"Sample ID":"S00019655",
"Factors":{"Sample type":"Serum","Type":"WT"}
},
{
"Subject ID":"SU0013203",
"Sample ID":"S00019656",
"Factors":{"Sample type":"Serum","Type":"KO"}
},
{
"Subject ID":"SU0013204",
"Sample ID":"S00019657",
"Factors":{"Sample type":"Serum","Type":"KO"}
},
{
"Subject ID":"SU0013205",
"Sample ID":"S00019658",
"Factors":{"Sample type":"Serum","Type":"KO"}
},
{
"Subject ID":"SU0013206",
"Sample ID":"S00019659",
"Factors":{"Sample type":"Serum","Type":"KO"}
},
{
"Subject ID":"SU9999996",
"Sample ID":"S00020332",
"Factors":{"Sample type":"Pooled sample","Type":"Pooled quadriceps muscle"}
},
{
"Subject ID":"SU9999996",
"Sample ID":"S00020333",
"Factors":{"Sample type":"Pooled sample","Type":"Pooled serum"}
}
],
"COLLECTION":{"COLLECTION_SUMMARY":"-"},

"TREATMENT":{"TREATMENT_SUMMARY":"-"},

"SAMPLEPREP":{"SAMPLEPREP_SUMMARY":"-","SAMPLEPREP_PROTOCOL_FILENAME":"A008_Acyl_Carnitines.pdf"},

"CHROMATOGRAPHY":{"CHROMATOGRAPHY_TYPE":"Reversed phase","INSTRUMENT_NAME":"Agilent","COLUMN_NAME":"Waters Xbridge BEH C18 (50 x 1mm, 3.5um)"},

"ANALYSIS":{"ANALYSIS_TYPE":"MS","ANALYSIS_PROTOCOL_FILE":"A008 - Acyl Carnitines.pdf"},

"MS":{"MS_COMMENTS":"-","INSTRUMENT_NAME":"Agilent 6490A QQQ","INSTRUMENT_TYPE":"Triple quadrupole","MS_TYPE":"ESI","ION_MODE":"POSITIVE"},

"MS_METABOLITE_DATA":{
"Units":"pmol/mg",

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}

}