#METABOLOMICS WORKBENCH nmach_20180315_075909_mwtab.txt DATATRACK_ID:1344 STUDY_ID:ST000945 ANALYSIS_ID:AN001551 PROJECT_ID:PR000650
VERSION             	1
CREATED_ON             	March 15, 2018, 1:44 pm
#PROJECT
PR:PROJECT_TITLE                 	The gut microbiota influence the basal physiological parameters in equine
PR:PROJECT_TITLE                 	athletes
PR:PROJECT_TYPE                  	Comparison metabolome time
PR:PROJECT_SUMMARY               	Comparison of serum metabolome and feces metagenome data from 52 horses before
PR:PROJECT_SUMMARY               	and after an endurance competition.
PR:INSTITUTE                     	INRA
PR:LAST_NAME                     	Mach
PR:FIRST_NAME                    	Núria
PR:ADDRESS                       	Domaine Vilvert, 78352 Jouy en Josas, France
PR:EMAIL                         	nuria.mach@inra.fr
PR:PHONE                         	+33 (0)1 34 65 26 75
#STUDY
ST:STUDY_TITLE                   	The gut microbiota influence the basal physiological parameters in equine
ST:STUDY_TITLE                   	athletes
ST:STUDY_SUMMARY                 	Comparison of serum metabolome and feces metagenome data from 52 horses before
ST:STUDY_SUMMARY                 	and after an endurance competition.
ST:INSTITUTE                     	INRA
ST:LAST_NAME                     	Mach
ST:FIRST_NAME                    	Núria
ST:ADDRESS                       	Domaine de Vilvert, 78352 Jouy en Josas, France
ST:EMAIL                         	nuria.mach@inra.fr
ST:PHONE                         	+33 (0)1 34 65 26 75
#SUBJECT
SU:SUBJECT_TYPE                  	Mammal
SU:SUBJECT_SPECIES               	Equus caballus
SU:TAXONOMY_ID                   	9796
#SUBJECT_SAMPLE_FACTORS:         	SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Additional sample data
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.201	ECAOMIC.201_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.201	ECAOMIC.201_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.202	ECAOMIC.202_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.202	ECAOMIC.202_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.203	ECAOMIC.203_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.203	ECAOMIC.203_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.204	ECAOMIC.204_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.204	ECAOMIC.204_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.205	ECAOMIC.205_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.205	ECAOMIC.205_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.206	ECAOMIC.206_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.206	ECAOMIC.206_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.209	ECAOMIC.209_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.209	ECAOMIC.209_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.210	ECAOMIC.210_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.210	ECAOMIC.210_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.211	ECAOMIC.211_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.211	ECAOMIC.211_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.212	ECAOMIC.212_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.212	ECAOMIC.212_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.213	ECAOMIC.213_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.213	ECAOMIC.213_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.214	ECAOMIC.214_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.214	ECAOMIC.214_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.215	ECAOMIC.215_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.215	ECAOMIC.215_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.216	ECAOMIC.216_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.216	ECAOMIC.216_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.217	ECAOMIC.217_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.217	ECAOMIC.217_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.218	ECAOMIC.218_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.218	ECAOMIC.218_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.220	ECAOMIC.220_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.220	ECAOMIC.220_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.221	ECAOMIC.221_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.221	ECAOMIC.221_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.222	ECAOMIC.222_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.222	ECAOMIC.222_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.224	ECAOMIC.224_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.224	ECAOMIC.224_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.226	ECAOMIC.226_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.226	ECAOMIC.226_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.227	ECAOMIC.227_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.227	ECAOMIC.227_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.228	ECAOMIC.228_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.228	ECAOMIC.228_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.229	ECAOMIC.229_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.229	ECAOMIC.229_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.231	ECAOMIC.231_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.231	ECAOMIC.231_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.232	ECAOMIC.232_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.232	ECAOMIC.232_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.233	ECAOMIC.233_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.233	ECAOMIC.233_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.234	ECAOMIC.234_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.234	ECAOMIC.234_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.235	ECAOMIC.235_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.235	ECAOMIC.235_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.236	ECAOMIC.236_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.236	ECAOMIC.236_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.237	ECAOMIC.237_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.237	ECAOMIC.237_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.238	ECAOMIC.238_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.238	ECAOMIC.238_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.239	ECAOMIC.239_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.239	ECAOMIC.239_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.241	ECAOMIC.241_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.241	ECAOMIC.241_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.242	ECAOMIC.242_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.242	ECAOMIC.242_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.243	ECAOMIC.243_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.243	ECAOMIC.243_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.244	ECAOMIC.244_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.244	ECAOMIC.244_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.245	ECAOMIC.245_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.245	ECAOMIC.245_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.246	ECAOMIC.246_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.246	ECAOMIC.246_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.247	ECAOMIC.247_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.247	ECAOMIC.247_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.248	ECAOMIC.248_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.248	ECAOMIC.248_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.249	ECAOMIC.249_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.249	ECAOMIC.249_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.250	ECAOMIC.250_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.250	ECAOMIC.250_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.251	ECAOMIC.251_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.251	ECAOMIC.251_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.253	ECAOMIC.253_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.253	ECAOMIC.253_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.254	ECAOMIC.254_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.254	ECAOMIC.254_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.255	ECAOMIC.255_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.255	ECAOMIC.255_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.256	ECAOMIC.256_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.256	ECAOMIC.256_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.257	ECAOMIC.257_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.257	ECAOMIC.257_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.259	ECAOMIC.259_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.259	ECAOMIC.259_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.260	ECAOMIC.260_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.260	ECAOMIC.260_T1	Time:T1	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.262	ECAOMIC.262_T0	Time:T0	Dataset=experimental
SUBJECT_SAMPLE_FACTORS           	ECAOMIC.262	ECAOMIC.262_T1	Time:T1	Dataset=experimental
#COLLECTION
CO:COLLECTION_SUMMARY            	"Blood samples for metabolome pofiling were obtained from the jugular vein at
CO:COLLECTION_SUMMARY            	rest (Basal, T0) and/or immediately after the end of the competition (T1).
CO:COLLECTION_SUMMARY            	Pretreatment of the blood samples was carried out immediately after the
CO:COLLECTION_SUMMARY            	collection because the access to refrigeration and electrical power supply was
CO:COLLECTION_SUMMARY            	available under the field conditions. Briefly, whole blood samples from each
CO:COLLECTION_SUMMARY            	horse were collected in sodium fluoride and oxalate tubes for metabolome
CO:COLLECTION_SUMMARY            	profiling in order to inhibit further glycolysis that may increase the lactate
CO:COLLECTION_SUMMARY            	levels after sampling. Whole blood draw for plasma generation was put at once at
CO:COLLECTION_SUMMARY            	4ºC to minimize the metabolic activity of cells and enzymes and kept the
CO:COLLECTION_SUMMARY            	metabolite pattern almost stable. Clotting time at 4ºC was strictly controlled
CO:COLLECTION_SUMMARY            	for all samples to avoid cell lyses and affect the components of the metabolome.
CO:COLLECTION_SUMMARY            	After clotting at 4ºC, the plasma was separated from the blood cells,
CO:COLLECTION_SUMMARY            	subsequently transported to the lab at 4ºC and frozen at -80 °C (no more
CO:COLLECTION_SUMMARY            	than 5 h later, in all cases)."
CO:SAMPLE_TYPE                   	Blood (whole)
#TREATMENT
TR:TREATMENT_SUMMARY             	Two time course comparison of metabolome: T1 (post-endurance competition)
TR:TREATMENT_SUMMARY             	relative to T0 (baseline, pre- endurance competition).
#SAMPLEPREP
SP:SAMPLEPREP_SUMMARY            	The plasmas were thawed at room temperature. In the 5 mm NMR tubes, 600 µL of
SP:SAMPLEPREP_SUMMARY            	plasma was added with 100 µL deuterium oxide for field locking.
#CHROMATOGRAPHY
CH:CHROMATOGRAPHY_TYPE           	-
CH:INSTRUMENT_NAME               	-
CH:COLUMN_NAME                   	-
#ANALYSIS
AN:ANALYSIS_TYPE                 	NMR
#NMR
NM:INSTRUMENT_NAME               	Bruker Avance III
NM:INSTRUMENT_TYPE               	FT-NMR
NM:NMR_EXPERIMENT_TYPE           	1D-1H
NM:SPECTROMETER_FREQUENCY        	500
NM:NMR_RESULTS_FILE              	ST000945_AN001551_Results.txt	UNITS:ppm
#END