#METABOLOMICS WORKBENCH JKubanek_20210715_060800 DATATRACK_ID:2746 STUDY_ID:ST001880 ANALYSIS_ID:AN003046 PROJECT_ID:PR001186
VERSION             	1
CREATED_ON             	July 21, 2021, 1:17 pm
#PROJECT
PR:PROJECT_TITLE                 	Predator Cues Target Signaling Pathways in Toxic Algal Metabolome
PR:PROJECT_TYPE                  	Metabolomics to elucidate signaling pathway
PR:PROJECT_SUMMARY               	Early detection of predators is critical to the survival of all living
PR:PROJECT_SUMMARY               	organisms. For phytoplankton, recognition and response to chemical cues from
PR:PROJECT_SUMMARY               	predators, as evidence of predation risk, is particularly crucial. The
PR:PROJECT_SUMMARY               	phytoplankton Alexandrium minutum upregulates its toxicity when exposed to
PR:PROJECT_SUMMARY               	copepodamides, a suite of compounds released by copepod predators. However, how
PR:PROJECT_SUMMARY               	A. minutum perceives these predatory cues and what metabolic pathways are
PR:PROJECT_SUMMARY               	involved in initiating toxin induction remains unknown. In this study LC/MS and
PR:PROJECT_SUMMARY               	NMR-based metabolomics uncovered subtle physiological responses of A. minutum to
PR:PROJECT_SUMMARY               	copepodamides, including dysregulation of valine biosynthesis and enhancement of
PR:PROJECT_SUMMARY               	butanoate metabolism and arginine biosynthesis. While we have yet to identify a
PR:PROJECT_SUMMARY               	chemoreceptor directly activated by copepod cues, based on the results of
PR:PROJECT_SUMMARY               	inhibition experiments detection of copepodamides appears to disrupt the
PR:PROJECT_SUMMARY               	activity of serine/threonine phosphatases leading to increased jasmonic acid
PR:PROJECT_SUMMARY               	biosynthesis and signaling, which leads to amplified gonyautoxin biosynthesis in
PR:PROJECT_SUMMARY               	A. minutum. This study is an important step toward a better understanding of
PR:PROJECT_SUMMARY               	chemosensory ecology of predator-prey interactions in phytoplankton.
PR:INSTITUTE                     	Georgia Institute of Technology
PR:DEPARTMENT                    	School of Biological Sciences, School of Chemistry and Biochemistry, Center for
PR:DEPARTMENT                    	Microbial Dynamics and Infection, Parker H. Petit Institute for Bioengineering
PR:DEPARTMENT                    	and Bioscience
PR:LABORATORY                    	Kubanek Lab
PR:LAST_NAME                     	Brown
PR:FIRST_NAME                    	Emily
PR:ADDRESS                       	950 Atlantic Dr Atlanta, GA, 30332, USA
PR:EMAIL                         	julia.kubanek@biosci.gatech.edu
PR:PHONE                         	404-894-8424
PR:PROJECT_COMMENTS              	This study has 3 parts: 2 NMR (polar and non-polar metabolites) and MS
PR:CONTRIBUTORS                  	Emily R. Brown, Sam G. Moore, David A. Gaul, and Julia Kubanek
#STUDY
ST:STUDY_TITLE                   	NMR Predator Cues Target Signaling Pathways in Toxic Algal Metabolome (Polar
ST:STUDY_TITLE                   	metabolites)
ST:STUDY_TYPE                    	1H NMR Metabolomics to elucidate signaling pathway
ST:STUDY_SUMMARY                 	Metabolomics investigation of the phytoplankton Alexandrium minutum with and
ST:STUDY_SUMMARY                 	without copepod cues in order to explore cell signaling involved in toxin
ST:STUDY_SUMMARY                 	induction.
ST:INSTITUTE                     	Georgia Institute of Technology
ST:DEPARTMENT                    	School of Biological Sciences, School of Chemistry and Biochemistry, Center for
ST:DEPARTMENT                    	Microbial Dynamics and Infection, Parker H. Petit Institute for Bioengineering
ST:DEPARTMENT                    	and Bioscience
ST:LABORATORY                    	Kubanek Lab
ST:LAST_NAME                     	Brown
ST:FIRST_NAME                    	Emily
ST:ADDRESS                       	950 Atlantic Dr Atlanta, Georgia USA 30332
ST:EMAIL                         	julia.kubanek@biosci.gatech.edu
ST:PHONE                         	404-894-8424
ST:NUM_GROUPS                    	2
ST:TOTAL_SUBJECTS                	40
ST:STUDY_COMMENTS                	Part 1 of 3. This part includes NMR analysis of polar metabolites using oPLSDA.
ST:STUDY_COMMENTS                	Parts 2 and 3 inlcude NMR analysis of nonpolar metabolites and the corresponding
ST:STUDY_COMMENTS                	mass spectrometry metabolomics for both polar and non-polar metabolites.
#SUBJECT
SU:SUBJECT_TYPE                  	Other organism
SU:SUBJECT_SPECIES               	Alexandrium minutum
SU:TAXONOMY_ID                   	39455
SU:GENOTYPE_STRAIN               	CCMP 113
SU:GENDER                        	Not applicable
#SUBJECT_SAMPLE_FACTORS:         	SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data
SUBJECT_SAMPLE_FACTORS           	-	Control 1	Treatment:Control	RAW_FILE_NAME=Control 1; Cellular_toxicity (fmol)=0.3; Cells_per_mL=20547; Cells_in_polar_NMR_analysis=3821742; Polar_NMR_solvent_volume (uL)=224; Cells_in_polar_MS_analysis=1273914; Polar_MS_solvent_volume (uL)=280
SUBJECT_SAMPLE_FACTORS           	-	Control 2	Treatment:Control	RAW_FILE_NAME=Control 2; Cellular_toxicity (fmol)=0.36; Cells_per_mL=20299; Cells_in_polar_NMR_analysis=3775614; Polar_NMR_solvent_volume (uL)=222; Cells_in_polar_MS_analysis=1258538; Polar_MS_solvent_volume (uL)=277
SUBJECT_SAMPLE_FACTORS           	-	Control 3	Treatment:Control	RAW_FILE_NAME=Control 3; Cellular_toxicity (fmol)=0.4; Cells_per_mL=20670; Cells_in_polar_NMR_analysis=3844620; Polar_NMR_solvent_volume (uL)=226; Cells_in_polar_MS_analysis=1281540; Polar_MS_solvent_volume (uL)=282
SUBJECT_SAMPLE_FACTORS           	-	Control 4	Treatment:Control	RAW_FILE_NAME=Control 4; Cellular_toxicity (fmol)=0.45; Cells_per_mL=20299; Cells_in_polar_NMR_analysis=3775614; Polar_NMR_solvent_volume (uL)=222; Cells_in_polar_MS_analysis=1258538; Polar_MS_solvent_volume (uL)=277
SUBJECT_SAMPLE_FACTORS           	-	Control 5	Treatment:Control	RAW_FILE_NAME=Control 5; Cellular_toxicity (fmol)=0.29; Cells_per_mL=20670; Cells_in_polar_NMR_analysis=3844620; Polar_NMR_solvent_volume (uL)=226; Cells_in_polar_MS_analysis=1281540; Polar_MS_solvent_volume (uL)=282
SUBJECT_SAMPLE_FACTORS           	-	Control 6	Treatment:Control	RAW_FILE_NAME=Control 6; Cellular_toxicity (fmol)=0.46; Cells_per_mL=21165; Cells_in_polar_NMR_analysis=3936690; Polar_NMR_solvent_volume (uL)=231; Cells_in_polar_MS_analysis=1312230; Polar_MS_solvent_volume (uL)=289
SUBJECT_SAMPLE_FACTORS           	-	Control 7	Treatment:Control	RAW_FILE_NAME=Control 7; Cellular_toxicity (fmol)=0.43; Cells_per_mL=20299; Cells_in_polar_NMR_analysis=3775614; Polar_NMR_solvent_volume (uL)=222; Cells_in_polar_MS_analysis=1258538; Polar_MS_solvent_volume (uL)=277
SUBJECT_SAMPLE_FACTORS           	-	Control 8	Treatment:Control	RAW_FILE_NAME=Control 8; Cellular_toxicity (fmol)=0.41; Cells_per_mL=20794; Cells_in_polar_NMR_analysis=3867684; Polar_NMR_solvent_volume (uL)=227; Cells_in_polar_MS_analysis=1289228; Polar_MS_solvent_volume (uL)=284
SUBJECT_SAMPLE_FACTORS           	-	Control 9	Treatment:Control	RAW_FILE_NAME=Control 9; Cellular_toxicity (fmol)=0.34; Cells_per_mL=20423; Cells_in_polar_NMR_analysis=3798678; Polar_NMR_solvent_volume (uL)=223; Cells_in_polar_MS_analysis=1266226; Polar_MS_solvent_volume (uL)=279
SUBJECT_SAMPLE_FACTORS           	-	Control 10	Treatment:Control	RAW_FILE_NAME=Control 10; Cellular_toxicity (fmol)=0.34; Cells_per_mL=20670; Cells_in_polar_NMR_analysis=3844620; Polar_NMR_solvent_volume (uL)=226; Cells_in_polar_MS_analysis=1281540; Polar_MS_solvent_volume (uL)=282
SUBJECT_SAMPLE_FACTORS           	-	Control 11	Treatment:Control	RAW_FILE_NAME=Control 11; Cellular_toxicity (fmol)=0.4; Cells_per_mL=19433; Cells_in_polar_NMR_analysis=3614538; Polar_NMR_solvent_volume (uL)=212; Cells_in_polar_MS_analysis=1204846; Polar_MS_solvent_volume (uL)=265
SUBJECT_SAMPLE_FACTORS           	-	Control 12	Treatment:Control	RAW_FILE_NAME=Control 12; Cellular_toxicity (fmol)=0.43; Cells_per_mL=20423; Cells_in_polar_NMR_analysis=3798678; Polar_NMR_solvent_volume (uL)=223; Cells_in_polar_MS_analysis=1266226; Polar_MS_solvent_volume (uL)=279
SUBJECT_SAMPLE_FACTORS           	-	Control 13	Treatment:Control	RAW_FILE_NAME=N/A; Cellular_toxicity (fmol)=0.31; Cells_per_mL=20299; Cells_in_polar_NMR_analysis=3775614; Polar_NMR_solvent_volume (uL)=222; Cells_in_polar_MS_analysis=1258538; Polar_MS_solvent_volume (uL)=277
SUBJECT_SAMPLE_FACTORS           	-	Control 14	Treatment:Control	RAW_FILE_NAME=Control 14; Cellular_toxicity (fmol)=0.36; Cells_per_mL=20175; Cells_in_polar_NMR_analysis=3752550; Polar_NMR_solvent_volume (uL)=220; Cells_in_polar_MS_analysis=1250850; Polar_MS_solvent_volume (uL)=275
SUBJECT_SAMPLE_FACTORS           	-	Control 15	Treatment:Control	RAW_FILE_NAME=Control 15; Cellular_toxicity (fmol)=0.37; Cells_per_mL=20052; Cells_in_polar_NMR_analysis=3729672; Polar_NMR_solvent_volume (uL)=219; Cells_in_polar_MS_analysis=1243224; Polar_MS_solvent_volume (uL)=274
SUBJECT_SAMPLE_FACTORS           	-	Control 16	Treatment:Control	RAW_FILE_NAME=Control 16; Cellular_toxicity (fmol)=0.43; Cells_per_mL=20670; Cells_in_polar_NMR_analysis=3844620; Polar_NMR_solvent_volume (uL)=226; Cells_in_polar_MS_analysis=1281540; Polar_MS_solvent_volume (uL)=282
SUBJECT_SAMPLE_FACTORS           	-	Control 17	Treatment:Control	RAW_FILE_NAME=Control 17; Cellular_toxicity (fmol)=0.43; Cells_per_mL=21165; Cells_in_polar_NMR_analysis=3936690; Polar_NMR_solvent_volume (uL)=231; Cells_in_polar_MS_analysis=1312230; Polar_MS_solvent_volume (uL)=289
SUBJECT_SAMPLE_FACTORS           	-	Control 18	Treatment:Control	RAW_FILE_NAME=Control 18; Cellular_toxicity (fmol)=0.34; Cells_per_mL=21165; Cells_in_polar_NMR_analysis=3936690; Polar_NMR_solvent_volume (uL)=231; Cells_in_polar_MS_analysis=1312230; Polar_MS_solvent_volume (uL)=289
SUBJECT_SAMPLE_FACTORS           	-	Control 19	Treatment:Control	RAW_FILE_NAME=Control 19; Cellular_toxicity (fmol)=0.41; Cells_per_mL=20547; Cells_in_polar_NMR_analysis=3821742; Polar_NMR_solvent_volume (uL)=224; Cells_in_polar_MS_analysis=1273914; Polar_MS_solvent_volume (uL)=280
SUBJECT_SAMPLE_FACTORS           	-	Control 20	Treatment:Control	RAW_FILE_NAME=Control 20; Cellular_toxicity (fmol)=0.35; Cells_per_mL=19309; Cells_in_polar_NMR_analysis=3591474; Polar_NMR_solvent_volume (uL)=211; Cells_in_polar_MS_analysis=1197158; Polar_MS_solvent_volume (uL)=264
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 1	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 1; Cellular_toxicity (fmol)=0.95; Cells_per_mL=19804; Cells_in_polar_NMR_analysis=3683544; Polar_NMR_solvent_volume (uL)=216; Cells_in_polar_MS_analysis=1227848; Polar_MS_solvent_volume (uL)=270
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 2	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 2; Cellular_toxicity (fmol)=0.78; Cells_per_mL=19309; Cells_in_polar_NMR_analysis=3591474; Polar_NMR_solvent_volume (uL)=211; Cells_in_polar_MS_analysis=1197158; Polar_MS_solvent_volume (uL)=264
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 3	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 3; Cellular_toxicity (fmol)=0.64; Cells_per_mL=21165; Cells_in_polar_NMR_analysis=3936690; Polar_NMR_solvent_volume (uL)=231; Cells_in_polar_MS_analysis=1312230; Polar_MS_solvent_volume (uL)=289
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 4	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 4; Cellular_toxicity (fmol)=1.02; Cells_per_mL=18938; Cells_in_polar_NMR_analysis=3522468; Polar_NMR_solvent_volume (uL)=207; Cells_in_polar_MS_analysis=1174156; Polar_MS_solvent_volume (uL)=228
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 5	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 5; Cellular_toxicity (fmol)=0.69; Cells_per_mL=20299; Cells_in_polar_NMR_analysis=3775614; Polar_NMR_solvent_volume (uL)=222; Cells_in_polar_MS_analysis=1258538; Polar_MS_solvent_volume (uL)=277
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 6	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 6; Cellular_toxicity (fmol)=0.74; Cells_per_mL=18938; Cells_in_polar_NMR_analysis=3522468; Polar_NMR_solvent_volume (uL)=207; Cells_in_polar_MS_analysis=1174156; Polar_MS_solvent_volume (uL)=258
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 7	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 7; Cellular_toxicity (fmol)=0.7; Cells_per_mL=19061; Cells_in_polar_NMR_analysis=3545346; Polar_NMR_solvent_volume (uL)=208; Cells_in_polar_MS_analysis=1181782; Polar_MS_solvent_volume (uL)=260
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 8	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 8; Cellular_toxicity (fmol)=0.74; Cells_per_mL=19433; Cells_in_polar_NMR_analysis=3614538; Polar_NMR_solvent_volume (uL)=212; Cells_in_polar_MS_analysis=1204846; Polar_MS_solvent_volume (uL)=265
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 9	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 9; Cellular_toxicity (fmol)=0.89; Cells_per_mL=20299; Cells_in_polar_NMR_analysis=3775614; Polar_NMR_solvent_volume (uL)=222; Cells_in_polar_MS_analysis=1258538; Polar_MS_solvent_volume (uL)=277
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 10	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 10; Cellular_toxicity (fmol)=0.85; Cells_per_mL=19928; Cells_in_polar_NMR_analysis=3706608; Polar_NMR_solvent_volume (uL)=218; Cells_in_polar_MS_analysis=1235536; Polar_MS_solvent_volume (uL)=272
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 11	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 11; Cellular_toxicity (fmol)=0.86; Cells_per_mL=19928; Cells_in_polar_NMR_analysis=3706608; Polar_NMR_solvent_volume (uL)=218; Cells_in_polar_MS_analysis=1235536; Polar_MS_solvent_volume (uL)=272
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 12	Treatment:Copepodamide	RAW_FILE_NAME=N/A; Cellular_toxicity (fmol)=0.82; Cells_per_mL=19061; Cells_in_polar_NMR_analysis=3545346; Polar_NMR_solvent_volume (uL)=208; Cells_in_polar_MS_analysis=1181782; Polar_MS_solvent_volume (uL)=260
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 13	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 13; Cellular_toxicity (fmol)=0.83; Cells_per_mL=18566; Cells_in_polar_NMR_analysis=3453276; Polar_NMR_solvent_volume (uL)=203; Cells_in_polar_MS_analysis=1151092; Polar_MS_solvent_volume (uL)=253
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 14	Treatment:Copepodamide	RAW_FILE_NAME=N/A; Cellular_toxicity (fmol)=0.71; Cells_per_mL=18319; Cells_in_polar_NMR_analysis=3407334; Polar_NMR_solvent_volume (uL)=200; Cells_in_polar_MS_analysis=1135778; Polar_MS_solvent_volume (uL)=250
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 15	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 15; Cellular_toxicity (fmol)=0.87; Cells_per_mL=19433; Cells_in_polar_NMR_analysis=3614538; Polar_NMR_solvent_volume (uL)=212; Cells_in_polar_MS_analysis=1204846; Polar_MS_solvent_volume (uL)=265
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 16	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 16; Cellular_toxicity (fmol)=0.59; Cells_per_mL=19433; Cells_in_polar_NMR_analysis=3614538; Polar_NMR_solvent_volume (uL)=212; Cells_in_polar_MS_analysis=1204846; Polar_MS_solvent_volume (uL)=265
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 17	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 17; Cellular_toxicity (fmol)=0.71; Cells_per_mL=19185; Cells_in_polar_NMR_analysis=3568410; Polar_NMR_solvent_volume (uL)=209; Cells_in_polar_MS_analysis=1189470; Polar_MS_solvent_volume (uL)=262
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 18	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 18; Cellular_toxicity (fmol)=0.62; Cells_per_mL=19928; Cells_in_polar_NMR_analysis=3706608; Polar_NMR_solvent_volume (uL)=218; Cells_in_polar_MS_analysis=1235536; Polar_MS_solvent_volume (uL)=272
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 19	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 19; Cellular_toxicity (fmol)=0.88; Cells_per_mL=18442; Cells_in_polar_NMR_analysis=3430212; Polar_NMR_solvent_volume (uL)=201; Cells_in_polar_MS_analysis=1143404; Polar_MS_solvent_volume (uL)=252
SUBJECT_SAMPLE_FACTORS           	-	Copepodamide 20	Treatment:Copepodamide	RAW_FILE_NAME=Copepodamide 20; Cellular_toxicity (fmol)=0.6; Cells_per_mL=18814; Cells_in_polar_NMR_analysis=3499404; Polar_NMR_solvent_volume (uL)=205; Cells_in_polar_MS_analysis=1166468; Polar_MS_solvent_volume (uL)=257
#COLLECTION
CO:COLLECTION_SUMMARY            	Alexandrium minutum cells were collected by vacuum filtration onto GF/F filters
CO:COLLECTION_SUMMARY            	and quenched with liquid nitrogen. Frozen cells with filters were stored in foil
CO:COLLECTION_SUMMARY            	(previously muffled for 3 h at 450 °C) at -80 °C until extraction.
CO:COLLECTION_PROTOCOL_FILENAME  	Predator Cues Target Signaling Pathways in Toxic Algal Metabolome_protocol.pdf
CO:SAMPLE_TYPE                   	Algae
CO:COLLECTION_METHOD             	Filtration and Freeze
CO:STORAGE_CONDITIONS            	-80℃
#TREATMENT
TR:TREATMENT_SUMMARY             	Twice, first at the start of the experiment and again 24 h later, 1.5 mL of
TR:TREATMENT_SUMMARY             	either 0.2 µM copepodamides (copepod cue) in DMSO (treatment, n=20) or DMSO
TR:TREATMENT_SUMMARY             	alone (control, n=20) were added aseptically to 300 mL cultures of Alexandrium
TR:TREATMENT_SUMMARY             	minutum resulting in a final concentration of 1 nM copepodamides.
TR:TREATMENT_PROTOCOL_FILENAME   	Predator Cues Target Signaling Pathways in Toxic Algal Metabolome_protocol.pdf
#SAMPLEPREP
SP:SAMPLEPREP_SUMMARY            	Polar extracts were dissolved at a concentration equivalent to 1.70 x 10^7 A.
SP:SAMPLEPREP_SUMMARY            	minutum cells mL-1 in 90:10 H2O/D2O (99.96% atom D2O; Cambridge Isotope Labs)
SP:SAMPLEPREP_SUMMARY            	with 0.2 mM phosphate buffer (pH 7.4) and 0.25 mM 3 (trimethylsilyl)propionic
SP:SAMPLEPREP_SUMMARY            	2,2,3,3d 4 acid (TMSP), as internal standard, for 1H NMR spectroscopy analysis.
SP:SAMPLEPREP_SUMMARY            	The media blank extract was prepared in the smallest volume of solvent possible
SP:SAMPLEPREP_SUMMARY            	(175 µL). Particulates were excluded by briefly centrifuging the samples and
SP:SAMPLEPREP_SUMMARY            	then carefully transferring the extracts into 3 mm NMR tubes. The extracts were
SP:SAMPLEPREP_SUMMARY            	analyzed using a Bruker Avance IIIHD 800 MHz NMR spectrometer equipped with a 3
SP:SAMPLEPREP_SUMMARY            	mm triple resonance broadband cryoprobe. Spectra for the polar extracts were
SP:SAMPLEPREP_SUMMARY            	acquired using a 1D water presaturation (Bruker zgpr pulse sequence) with a
SP:SAMPLEPREP_SUMMARY            	spectral width of 12 kHz centered at 3758.36 Hz, with a relaxation delay 3 s,
SP:SAMPLEPREP_SUMMARY            	over 480 scans.
SP:SAMPLEPREP_PROTOCOL_FILENAME  	Predator Cues Target Signaling Pathways in Toxic Algal Metabolome_protocol.pdf
SP:EXTRACT_STORAGE               	-80℃
#ANALYSIS
AN:ANALYSIS_TYPE                 	NMR
#NMR
NM:INSTRUMENT_NAME               	Bruker Avance IIIHD
NM:INSTRUMENT_TYPE               	FT-NMR
NM:NMR_EXPERIMENT_TYPE           	1D-1H
NM:SPECTROMETER_FREQUENCY        	800 MHz
NM:NMR_PROBE                     	3 mm triple resonance broadband cryoprobe
NM:NMR_SOLVENT                   	90:10 H2O/D2O (99.96% atom D2O; Cambridge Isotope Labs) with 0.2 mM phosphate
NM:NMR_SOLVENT                   	buffer (pH 7.4) and 0.25 mM 3-(trimethylsilyl)propionic-2,2,3,3d4-acid
NM:NMR_TUBE_SIZE                 	3 mm
NM:PULSE_SEQUENCE                	zgpr
NM:NUMBER_OF_SCANS               	480
NM:RELAXATION_DELAY              	3s
NM:SPECTRAL_WIDTH                	12 kHz
NM:BASELINE_CORRECTION_METHOD    	Spline
NM:BINNED_INCREMENT              	0.005 ppm
NM:NMR_RESULTS_FILE              	Preprocessed_binned_polar_NMRmetabolomics.txt	UNITS:area under the curve
#END