#METABOLOMICS WORKBENCH Jianzhi.Hu@pnnl.gov_20161031_162624 DATATRACK_ID:770 STUDY_ID:ST000500 ANALYSIS_ID:AN000769 PROJECT_ID:PR000378 VERSION 1 CREATED_ON October 31, 2016, 4:41 pm #PROJECT PR:PROJECT_TITLE Metabolomics Analysis of Kidney from C57BL/6 Mouse Exposed to Ionizing Radiation PR:PROJECT_SUMMARY NMR based Metabolomics Analysis of Kidney from C57BL/6 Mouse Exposed to Ionizing PR:PROJECT_SUMMARY Radiation PR:INSTITUTE Pacific Northwest National Laboratory PR:DEPARTMENT Fundamental & Computational Sciences PR:LAST_NAME Hu PR:FIRST_NAME Jian Zhi PR:ADDRESS 3335 Innovation Blvd, Richland, Washington, 99354, USA PR:EMAIL Jianzhi.Hu@pnnl.gov PR:PHONE (509)371-6544 #STUDY ST:STUDY_TITLE Metabolomics Analysis of Kidney from C57BL/6 Mouse Exposed to Ionizing Radiation ST:STUDY_TYPE Tissue Extracts Comparison ST:STUDY_SUMMARY Tissue extracts from ionizing readiation exposed mouse kidney and controls were ST:STUDY_SUMMARY compared via NMR based metabolomic analysis ST:INSTITUTE Pacific Northwest National Laboratory ST:LAST_NAME Hu ST:FIRST_NAME Jian Zhi ST:ADDRESS 3335 Innovation Blvd, Richland, Washington, 99354, USA ST:EMAIL Jianzhi.Hu@pnnl.gov ST:PHONE (509)371-6544 #SUBJECT SU:SUBJECT_TYPE Animal SU:SUBJECT_SPECIES Mus musculus #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Additional sample data SUBJECT_SAMPLE_FACTORS - G041 days post to radiation:4 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G042 days post to radiation:4 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G043 days post to radiation:4 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G044 days post to radiation:4 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G341 days post to radiation:4 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G342 days post to radiation:4 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G343 days post to radiation:4 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G344 days post to radiation:4 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G345 days post to radiation:4 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G741 days post to radiation:4 | radiation dose:7.8 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G742 days post to radiation:4 | radiation dose:7.8 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G743 days post to radiation:4 | radiation dose:7.8 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G744 days post to radiation:4 | radiation dose:7.8 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G011 days post to radiation:11 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G012 days post to radiation:11 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G013 days post to radiation:11 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G014 days post to radiation:11 | radiation dose:- | radiation source:sham SUBJECT_SAMPLE_FACTORS - G311 days post to radiation:11 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G312 days post to radiation:11 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G313 days post to radiation:11 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G314 days post to radiation:11 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - G315 days post to radiation:11 | radiation dose:3.0 | radiation source:gamma SUBJECT_SAMPLE_FACTORS - P311 days post to radiation:11 | radiation dose:3.0 | radiation source:proton SUBJECT_SAMPLE_FACTORS - P312 days post to radiation:11 | radiation dose:3.0 | radiation source:proton SUBJECT_SAMPLE_FACTORS - P313 days post to radiation:11 | radiation dose:3.0 | radiation source:proton SUBJECT_SAMPLE_FACTORS - P314 days post to radiation:11 | radiation dose:3.0 | radiation source:proton SUBJECT_SAMPLE_FACTORS - P315 days post to radiation:11 | radiation dose:3.0 | radiation source:proton #COLLECTION CO:COLLECTION_SUMMARY Kidneys were dissected and snap-frozen at -80°C before NMR spectroscopy and CO:COLLECTION_SUMMARY morphology analysis. #TREATMENT TR:TREATMENT_SUMMARY A total of 27 seven-week-old C57BL/6 female mice randomly into 6 groups, and TR:TREATMENT_SUMMARY then whole body being exposed to either gamma or proton radiation. The TR:TREATMENT_SUMMARY individually housed animals were fed a standard diet and maintained in an TR:TREATMENT_SUMMARY environment controlled facility with an ambient temperature of 22-25°C and 45% TR:TREATMENT_SUMMARY relative humidity on 12 h light-dark cycle. Mice were exposed to whole body TR:TREATMENT_SUMMARY gamma radiation using a high-activity source (1250 keV 60Co) with the linear TR:TREATMENT_SUMMARY energy transfer (LET) associated with these fields in the range of 0.2-2 TR:TREATMENT_SUMMARY keV/μm. The mice were isolated in the corner of their polymer cages and placed TR:TREATMENT_SUMMARY a minimum of 100 cm from the collimated 6000 Ci (222 TBq) 60Co source, and then TR:TREATMENT_SUMMARY irradiation to the proposed dosage, respectively. The result of absorbed dose TR:TREATMENT_SUMMARY rate at a depth of approximately 600 mg/cm2 were ~0.83 Gy/min relative to TR:TREATMENT_SUMMARY tissue. After irradiation the isolation barrier was removed and mice were TR:TREATMENT_SUMMARY transferred to Animal Facility.Mice placed into aerated polystyrene boxes TR:TREATMENT_SUMMARY immediately before exposure to the entrance region of proton at the BNL TR:TREATMENT_SUMMARY Alternating Gradient Synchrotron (AGS) (1055 MeV/nucleon at the target, with a TR:TREATMENT_SUMMARY track-averaged LET =148.2 keV/μm at target). Doses of 0 and 3.0 Gy were TR:TREATMENT_SUMMARY delivered to a maximum of four mice at ~0.83 Gy/min in a single fraction. All TR:TREATMENT_SUMMARY procedures (i.e., placement in aerated boxes and subsequent tissue harvesting) TR:TREATMENT_SUMMARY for the control mice were identical to those of irradiated animals, except that TR:TREATMENT_SUMMARY they received no radiation. #SAMPLEPREP SP:SAMPLEPREP_SUMMARY Step 1: After randomization of the samples, every preweighted intact frozen SP:SAMPLEPREP_SUMMARY kidney tissue was homogenized by a Tissue Tearsor in ice-cold after adding 4 ml SP:SAMPLEPREP_SUMMARY MeOH and 0.85 ml deionized H2O per gram of liver tissue, followed by vortexing SP:SAMPLEPREP_SUMMARY the mixture and then 2 ml chloroform per gram of tissue was added and vortexed SP:SAMPLEPREP_SUMMARY again. This process took 6 minutes and kept exactly the same for each sample. SP:SAMPLEPREP_SUMMARY Step 2: 2 ml chloroform and 2 ml deionized H2O per gram of tissue were added in SP:SAMPLEPREP_SUMMARY the mixture then vortexed again, followed by transferring the different layers SP:SAMPLEPREP_SUMMARY into glass vials separately with syringes after the mixture (in ice bath) SP:SAMPLEPREP_SUMMARY centrifuged. Finally, the solvents of hydrophilic metabolites were removed by SP:SAMPLEPREP_SUMMARY employing lyophilizer and then stored at -80°C freezer before NMR spectral SP:SAMPLEPREP_SUMMARY measurements. #CHROMATOGRAPHY CH:CHROMATOGRAPHY_TYPE - CH:INSTRUMENT_NAME - CH:COLUMN_NAME - #ANALYSIS AN:ANALYSIS_TYPE NMR #NMR NM:INSTRUMENT_NAME Varian INOVA 800 NM:INSTRUMENT_TYPE FT-NMR NM:NMR_EXPERIMENT_TYPE 1D-1H NM:SPECTROMETER_FREQUENCY 800MHz #NMR_METABOLITE_DATA NMR_METABOLITE_DATA:UNITS µM/mg NMR_METABOLITE_DATA_START metabolite_name G041 G042 G043 G044 G341 G342 G343 G344 G345 G741 G742 G743 G744 G011 G012 G013 G014 G311 G312 G313 G314 G315 P311 P312 P313 P314 P315 1,3-Diaminopropane 0.144 0.148 0.143 0.146 0.268 0.265 0.274 0.311 0.314 0.317 0.297 0.283 0.280 0.150 0.151 0.153 0.161 0.261 0.259 0.258 0.256 0.266 0.359 0.223 0.363 0.372 0.391 2-Aminobutyrate 0.272 0.278 0.255 0.259 0.194 0.221 0.201 0.226 0.238 0.201 0.182 0.175 0.173 0.280 0.289 0.283 0.280 0.232 0.227 0.227 0.213 0.213 0.189 0.205 0.190 0.198 0.212 2-Hydroxyvalerate 0.261 0.255 0.279 0.283 0.259 0.286 0.258 0.303 0.320 0.323 0.303 0.302 0.297 0.330 0.310 0.314 0.311 0.282 0.279 0.291 0.281 0.292 0.285 0.299 0.287 0.294 0.302 2-Oxobutyrate 0.072 0.086 0.073 0.081 0.101 0.088 0.100 0.088 0.092 0.089 0.077 0.072 0.082 0.072 0.081 0.078 0.072 0.096 0.080 0.114 0.094 0.080 0.058 0.053 0.061 0.058 0.054 3-Hydromuconate 0.077 0.073 0.076 0.067 0.068 0.083 0.070 0.076 0.080 0.081 0.076 0.099 0.079 0.066 0.071 0.071 0.066 0.067 0.071 0.077 0.066 0.065 0.061 0.070 0.065 0.069 0.055 3-Hydroxybutyrate 1.323 1.482 1.450 1.308 0.995 1.141 1.009 1.074 1.172 0.325 0.315 0.296 0.324 1.399 1.295 1.297 1.348 0.765 0.762 1.095 1.004 0.793 0.261 0.216 0.238 0.244 0.242 ADP 0.211 0.214 0.199 0.201 0.196 0.200 0.232 0.232 0.231 0.443 0.258 0.309 0.260 0.199 0.218 0.195 0.208 0.177 0.189 0.182 0.215 0.202 0.328 0.392 0.340 0.392 0.341 AMP 0.749 0.856 0.880 0.909 0.788 0.809 0.820 0.755 0.737 0.518 0.506 0.536 0.577 0.852 0.737 0.818 0.824 0.749 0.747 0.829 0.697 0.849 0.750 0.651 0.703 0.675 0.604 ATP 0.312 0.304 0.312 0.306 0.263 0.264 0.276 0.310 0.332 0.324 0.321 0.309 0.292 0.419 0.409 0.431 0.421 0.319 0.306 0.314 0.306 0.336 0.362 0.365 0.382 0.366 0.332 Adenosine 0.317 0.314 0.318 0.346 0.242 0.303 0.246 0.212 0.222 0.121 0.104 0.117 0.102 0.442 0.441 0.456 0.461 0.360 0.347 0.402 0.402 0.385 0.454 0.507 0.530 0.527 0.448 Alanine 0.897 1.156 1.067 1.003 1.114 1.265 1.400 1.358 1.360 2.011 2.053 1.716 1.702 1.199 1.030 1.210 1.228 1.107 1.336 1.104 1.324 1.308 1.524 1.768 1.665 1.707 1.793 Allantoin 0.152 0.158 0.159 0.143 0.146 0.171 0.147 0.161 0.169 0.201 0.207 0.192 0.182 0.151 0.139 0.157 0.142 0.150 0.145 0.145 0.139 0.148 0.182 0.197 0.183 0.150 0.170 Arginine 0.488 0.491 0.447 0.451 0.427 0.524 0.547 0.480 0.436 0.440 0.459 0.493 0.471 0.485 0.445 0.497 0.457 0.831 0.771 0.839 0.878 0.751 0.580 0.597 0.682 0.729 0.733 Ascorbate 2.012 2.113 1.997 1.952 1.646 1.606 1.525 1.668 1.749 1.600 1.273 1.599 1.292 2.157 1.981 1.992 1.930 1.799 1.748 1.744 1.796 1.804 1.648 1.786 1.660 1.713 1.798 Aspartate 1.877 2.371 2.150 1.969 1.532 1.613 1.428 1.506 1.981 5.025 5.231 5.007 5.015 2.295 1.805 2.365 1.855 1.469 1.824 1.711 1.860 1.465 1.761 3.013 2.844 2.881 2.849 Carnitine 0.963 0.946 0.908 0.894 0.811 1.120 1.214 1.227 1.048 1.056 1.292 1.200 0.938 0.973 0.974 0.998 1.124 1.425 1.106 1.199 1.424 1.325 1.424 1.396 1.145 1.547 1.425 Choline 0.154 0.149 0.149 0.159 0.161 0.186 0.136 0.149 0.133 0.129 0.121 0.141 0.137 0.152 0.168 0.182 0.198 0.202 0.202 0.214 0.211 0.210 0.256 0.187 0.174 0.183 0.192 Citrate 0.296 0.303 0.283 0.295 0.282 0.271 0.278 0.304 0.319 0.423 0.397 0.401 0.420 0.293 0.283 0.284 0.306 0.313 0.292 0.292 0.302 0.316 0.411 0.462 0.444 0.456 0.364 Creatine 1.213 1.348 1.345 1.234 0.975 1.088 1.119 1.071 0.983 0.727 0.652 0.699 0.650 1.167 1.190 1.147 1.300 0.995 1.134 1.089 1.058 1.048 0.667 0.782 0.727 0.835 0.856 Creatine phosphate 0.318 0.321 0.320 0.332 0.393 0.403 0.405 0.410 0.399 0.434 0.487 0.474 0.421 0.316 0.333 0.320 0.332 0.452 0.468 0.467 0.480 0.484 0.251 0.391 0.363 0.372 0.391 Creatinine 0.108 0.100 0.110 0.113 0.107 0.125 0.109 0.113 0.119 0.120 0.112 0.104 0.115 0.107 0.123 0.123 0.123 0.193 0.191 0.190 0.203 0.205 0.148 0.160 0.149 0.153 0.161 Ethanolamine 0.452 0.413 0.452 0.407 0.442 0.510 0.438 0.479 0.440 0.376 0.352 0.236 0.242 0.444 0.511 0.503 0.521 0.527 0.481 0.405 0.422 0.550 0.623 0.649 0.580 0.452 0.454 Fumarate 0.019 0.017 0.018 0.021 0.025 0.015 0.017 0.015 0.027 0.016 0.010 0.011 0.010 0.020 0.014 0.013 0.013 0.022 0.013 0.013 0.023 0.013 0.017 0.012 0.009 0.011 0.009 GTP 0.021 0.026 0.022 0.021 0.020 0.023 0.027 0.030 0.031 0.028 0.033 0.022 0.023 0.021 0.027 0.023 0.024 0.022 0.026 0.021 0.029 0.032 0.038 0.031 0.029 0.030 0.031 Glucose 1.666 1.732 1.596 1.851 1.030 1.124 1.514 1.350 1.322 1.059 1.199 0.993 0.803 1.999 1.510 1.621 1.937 1.972 1.807 1.790 1.996 2.055 2.233 1.974 1.607 1.574 2.365 Glucose-6-phosphate 2.416 2.402 2.265 2.498 1.839 2.055 2.505 2.739 2.106 1.432 1.814 1.783 1.392 3.374 3.218 2.987 2.522 3.293 3.845 3.300 3.912 3.804 3.303 3.256 3.135 3.166 2.232 Glutamate 5.097 5.332 5.500 5.516 5.556 6.026 6.445 6.567 5.527 7.267 6.974 6.891 6.629 5.417 5.123 6.074 6.158 4.514 4.386 5.257 4.999 5.610 5.619 6.546 5.592 5.488 6.505 Glutamine 1.318 1.192 1.112 1.140 1.217 1.388 1.208 1.321 1.365 1.633 1.532 1.547 1.555 1.379 1.431 1.423 1.305 1.485 1.467 1.478 1.391 1.500 1.284 1.391 1.293 1.238 1.300 Glutarate 0.198 0.206 0.202 0.203 0.273 0.300 0.300 0.298 0.295 0.791 0.949 0.753 0.811 0.224 0.225 0.219 0.213 0.238 0.216 0.394 0.281 0.266 0.258 0.258 0.324 0.291 0.306 Glutathione 1.013 1.074 1.000 1.015 0.699 0.672 1.000 0.829 1.017 1.319 1.284 1.192 1.210 0.999 0.952 1.166 1.237 1.092 1.111 1.205 0.911 0.989 1.270 1.349 1.326 1.255 0.919 Glycine 2.542 2.320 2.463 2.918 2.888 3.151 2.848 3.226 2.830 3.410 3.377 3.137 2.975 2.907 2.690 3.001 2.961 2.118 2.648 2.206 2.514 2.723 2.964 2.907 2.979 2.828 3.018 Glycolate 0.508 0.510 0.476 0.487 0.382 0.435 0.438 0.404 0.424 0.427 0.400 0.400 0.427 0.504 0.463 0.451 0.579 0.611 0.590 0.589 0.600 0.616 0.491 0.533 0.495 0.508 0.533 Histidine 0.061 0.073 0.065 0.054 0.058 0.055 0.059 0.056 0.058 0.061 0.051 0.072 0.050 0.063 0.052 0.062 0.070 0.068 0.052 0.056 0.069 0.060 0.081 0.078 0.094 0.076 0.073 Homoserine 2.878 2.943 2.805 3.039 1.965 2.293 2.286 2.127 2.274 2.292 2.150 1.997 1.985 3.064 3.108 3.148 3.018 3.845 3.390 3.790 3.459 3.692 3.554 3.983 4.216 4.370 3.865 Hypoxanthine 0.160 0.160 0.160 0.196 0.260 0.239 0.229 0.251 0.220 0.229 0.174 0.162 0.161 0.150 0.163 0.161 0.165 0.158 0.137 0.136 0.145 0.147 0.292 0.278 0.259 0.227 0.249 IMP 0.300 0.273 0.298 0.281 0.210 0.233 0.230 0.254 0.265 0.203 0.204 0.204 0.199 0.314 0.310 0.331 0.331 0.265 0.274 0.310 0.277 0.302 0.285 0.255 0.329 0.254 0.250 Isobutyrate 0.193 0.201 0.190 0.183 0.222 0.214 0.246 0.226 0.217 0.235 0.254 0.236 0.211 0.188 0.179 0.174 0.173 0.170 0.171 0.182 0.181 0.183 0.214 0.204 0.209 0.182 0.191 Isoleucine 0.181 0.155 0.171 0.175 0.197 0.201 0.213 0.207 0.160 0.231 0.265 0.268 0.229 0.154 0.150 0.147 0.143 0.180 0.190 0.209 0.206 0.199 0.183 0.191 0.192 0.197 0.207 Lactate 6.719 7.530 7.124 7.285 8.427 8.439 9.026 9.035 8.686 8.862 9.031 7.508 7.778 6.659 6.451 7.054 7.149 6.878 7.335 6.818 8.699 8.407 8.238 8.855 8.282 9.289 9.301 Leucine 0.456 0.442 0.485 0.411 0.428 0.482 0.568 0.518 0.459 0.499 0.483 0.432 0.428 0.485 0.408 0.431 0.418 0.378 0.371 0.460 0.434 0.428 0.455 0.415 0.472 0.404 0.413 Lysine 0.418 0.358 0.441 0.400 0.389 0.425 0.445 0.443 0.373 0.487 0.502 0.427 0.429 0.433 0.435 0.403 0.384 0.342 0.404 0.354 0.346 0.419 0.469 0.453 0.393 0.408 0.457 Mannitol 1.024 0.827 0.842 1.127 1.064 1.099 0.932 1.020 1.148 1.265 1.123 1.192 1.119 0.909 0.842 0.820 1.108 0.868 0.881 0.879 0.904 0.896 0.740 0.802 0.746 0.765 0.803 Mannose 0.037 0.035 0.032 0.033 0.036 0.040 0.034 0.035 0.036 0.035 0.033 0.031 0.036 0.037 0.034 0.033 0.035 0.031 0.035 0.039 0.042 0.042 0.033 0.036 0.033 0.034 0.036 NAD+ 0.875 0.806 0.852 0.771 0.773 0.741 0.787 1.240 1.237 0.953 1.233 1.046 1.170 0.809 0.799 0.885 0.798 0.780 0.801 0.852 0.829 0.778 0.689 0.628 0.675 0.641 0.685 NADH 0.096 0.095 0.091 0.112 0.115 0.129 0.122 0.122 0.145 0.143 0.103 0.140 0.116 0.090 0.117 0.118 0.111 0.130 0.124 0.141 0.145 0.143 0.202 0.195 0.228 0.219 0.238 NADP+ 0.111 0.115 0.123 0.130 0.125 0.142 0.156 0.155 0.161 0.162 0.155 0.141 0.136 0.138 0.130 0.128 0.140 0.144 0.168 0.154 0.175 0.185 0.176 0.146 0.169 0.149 0.176 NADPH 0.075 0.115 0.091 0.105 0.149 0.156 0.151 0.165 0.174 0.095 0.096 0.108 0.093 0.090 0.085 0.089 0.110 0.100 0.102 0.114 0.100 0.100 0.084 0.097 0.090 0.092 0.085 Niacinamide 0.044 0.056 0.045 0.038 0.061 0.056 0.054 0.055 0.068 0.046 0.047 0.032 0.027 0.052 0.030 0.048 0.038 0.038 0.030 0.035 0.045 0.032 0.046 0.030 0.035 0.025 0.036 Nicotinic acid adenine dinucleotide 0.034 0.043 0.035 0.038 0.040 0.038 0.033 0.039 0.031 0.046 0.033 0.031 0.029 0.043 0.033 0.038 0.032 0.024 0.024 0.028 0.030 0.035 0.034 0.036 0.034 0.032 0.045 O-Phosphocholine 0.741 0.801 0.923 0.827 1.401 1.359 1.547 1.559 1.194 0.722 0.706 0.625 0.650 0.736 0.734 0.750 0.817 0.808 0.734 0.701 0.749 0.831 0.950 0.665 0.743 0.676 0.922 O-Phosphoethanolamine 2.749 2.866 2.674 2.784 2.979 2.886 3.021 2.949 2.783 2.872 2.854 3.025 2.816 2.769 2.722 2.728 2.698 2.716 3.323 2.736 2.920 3.219 2.305 2.498 2.356 2.417 2.538 Oxypurinol 0.380 0.399 0.413 0.435 0.472 0.469 0.469 0.474 0.462 0.345 0.326 0.303 0.348 0.377 0.346 0.412 0.348 0.379 0.343 0.355 0.382 0.386 0.299 0.324 0.301 0.284 0.295 Phenylalanine 0.095 0.106 0.110 0.089 0.102 0.111 0.117 0.118 0.104 0.133 0.125 0.116 0.099 0.098 0.094 0.092 0.099 0.097 0.092 0.092 0.106 0.097 0.091 0.113 0.096 0.090 0.100 S-Adenosylhomocysteine 0.101 0.082 0.102 0.102 0.389 0.449 0.341 0.485 0.456 0.444 0.471 0.418 0.405 0.101 0.092 0.090 0.095 0.084 0.097 0.096 0.103 0.104 0.080 0.087 0.081 0.083 0.087 Serine 1.817 1.823 1.826 1.846 2.575 2.653 2.454 2.891 3.008 2.963 3.075 2.941 2.356 1.804 1.786 1.767 1.702 1.744 1.757 1.753 1.871 1.889 1.463 1.585 1.473 1.511 1.600 Succinate 1.759 1.922 1.823 2.019 2.000 2.027 2.350 2.343 2.198 2.198 1.874 1.802 1.750 1.816 1.744 1.796 1.924 2.008 1.854 1.708 1.921 1.951 1.713 1.634 1.518 1.861 1.566 Taurine 13.997 12.936 13.404 12.917 12.321 14.217 12.750 12.227 14.617 12.822 12.026 11.234 10.896 13.897 13.180 13.473 13.463 12.937 13.797 13.710 13.883 13.004 14.822 11.696 13.088 11.368 12.898 Theophylline 0.055 0.049 0.056 0.068 0.056 0.060 0.085 0.083 0.066 0.067 0.063 0.068 0.059 0.062 0.057 0.055 0.053 0.047 0.054 0.054 0.064 0.063 0.067 0.073 0.090 0.075 0.078 Threonine 1.438 1.499 1.615 1.535 1.745 1.566 1.695 1.704 1.873 1.980 1.860 1.891 1.813 1.598 1.744 1.570 1.624 1.800 1.845 1.777 1.897 1.915 2.348 2.335 2.016 2.068 2.242 Thymidine 0.028 0.030 0.047 0.031 0.052 0.062 0.053 0.047 0.059 0.044 0.062 0.052 0.056 0.029 0.038 0.049 0.031 0.046 0.039 0.038 0.039 0.037 0.047 0.043 0.039 0.039 0.040 Tryptophan 0.057 0.065 0.068 0.054 0.061 0.063 0.066 0.072 0.066 0.069 0.067 0.069 0.054 0.062 0.057 0.058 0.060 0.058 0.061 0.058 0.055 0.049 0.059 0.063 0.058 0.055 0.044 Tyrosine 0.074 0.074 0.078 0.076 0.128 0.120 0.135 0.149 0.133 0.113 0.112 0.128 0.103 0.073 0.066 0.074 0.073 0.119 0.078 0.083 0.088 0.103 0.102 0.115 0.122 0.124 0.115 UDP-N-Acetylglucosamine 0.137 0.136 0.123 0.122 0.099 0.111 0.124 0.106 0.101 0.107 0.096 0.102 0.098 0.146 0.141 0.142 0.146 0.144 0.141 0.146 0.154 0.140 0.163 0.144 0.154 0.140 0.123 UDP-galactose 0.111 0.117 0.108 0.109 0.092 0.109 0.126 0.122 0.112 0.107 0.106 0.131 0.125 0.109 0.125 0.123 0.116 0.091 0.098 0.114 0.112 0.088 0.081 0.094 0.114 0.108 0.157 UDP-glucose 0.223 0.191 0.193 0.202 0.147 0.162 0.182 0.169 0.192 0.219 0.241 0.253 0.222 0.192 0.225 0.221 0.221 0.201 0.199 0.215 0.223 0.213 0.218 0.217 0.259 0.213 0.243 UDP-glucuronate 0.129 0.146 0.132 0.126 0.122 0.134 0.123 0.128 0.126 0.102 0.113 0.108 0.092 0.129 0.150 0.147 0.151 0.123 0.146 0.122 0.146 0.145 0.131 0.117 0.117 0.123 0.121 UMP 0.218 0.195 0.202 0.199 0.145 0.144 0.140 0.141 0.141 0.131 0.111 0.124 0.120 0.216 0.203 0.200 0.193 0.170 0.160 0.199 0.196 0.187 0.141 0.139 0.129 0.117 0.121 Uracil 0.087 0.090 0.092 0.095 0.112 0.103 0.113 0.123 0.095 0.088 0.076 0.078 0.073 0.071 0.068 0.073 0.091 0.067 0.062 0.064 0.059 0.073 0.091 0.084 0.087 0.093 0.103 Uridine 0.149 0.148 0.160 0.147 0.167 0.167 0.178 0.202 0.185 0.199 0.219 0.212 0.184 0.142 0.145 0.147 0.140 0.125 0.128 0.118 0.137 0.152 0.165 0.144 0.143 0.166 0.157 Valine 0.217 0.221 0.225 0.212 0.241 0.253 0.299 0.264 0.298 0.226 0.212 0.213 0.200 0.215 0.220 0.215 0.205 0.203 0.201 0.207 0.201 0.203 0.242 0.214 0.224 0.174 0.183 myo-Inositol 7.560 7.886 7.794 7.688 8.815 8.145 8.370 8.225 8.168 8.706 8.845 7.110 7.194 7.567 7.001 7.209 7.490 7.029 7.806 7.261 6.976 7.116 9.343 7.409 8.870 7.798 7.395 sn-Glycero-3-phosphocholine 9.790 10.045 10.045 10.337 9.996 9.017 9.962 9.159 9.333 10.194 10.386 8.383 7.886 10.185 10.132 10.565 10.812 8.983 10.205 9.587 10.450 10.711 10.763 10.065 10.296 9.306 12.147 β-Alanine 0.327 0.328 0.306 0.314 0.409 0.438 0.478 0.507 0.502 0.672 0.630 0.871 0.746 0.335 0.320 0.315 0.326 0.249 0.228 0.237 0.253 0.234 0.181 0.203 0.188 0.193 0.203 π-Methylhistidine 0.050 0.050 0.060 0.061 0.061 0.037 0.075 0.095 0.086 0.074 0.081 0.072 0.077 0.059 0.064 0.062 0.066 0.045 0.061 0.062 0.075 0.074 0.072 0.078 0.080 0.082 0.079 τ-Methylhistidine 0.053 0.057 0.059 0.061 0.044 0.057 0.089 0.059 0.083 0.102 0.084 0.129 0.060 0.067 0.049 0.063 0.068 0.031 0.031 0.057 0.065 0.035 0.024 0.031 0.045 0.038 0.023 NMR_METABOLITE_DATA_END #METABOLITES METABOLITES_START metabolite_name PubChem ID KEGG ID 1,3-Diaminopropane 428 C00986 2-Aminobutyrate 5493 C02356 2-Hydroxyvalerate 98009 2-Oxobutyrate 51 C00026 3-Hydromuconate 107550 3-Hydroxybutyrate 441 C01089 ADP 6022 C00008 AMP 6083 C00020 ATP 5957 C00002 Adenosine 60961 C00212 Alanine 5950 C00041 Allantoin 204 C01551 Arginine 6322 C00062 Ascorbate 5785 C00072 Aspartate 5960 C00049 Carnitine 10917 C00318 Choline 305 C00114 Citrate 311 C00158 Creatine 586 C00300 Creatine phosphate 587 C02305 Creatinine 588 C00791 Ethanolamine 700 C00189 Fumarate 284 C00058 GTP 6830 C00044 Glucose 5793 C00031 Glucose-6-phosphate 5958 C00092 Glutamate 33032 C00025 Glutamine 5961 C00064 Glutarate 3772 C00489 Glutathione 124886 C00051 Glycine 750 C00037 Glycolate 757 C00160 Histidine 6274 C00135 Homoserine 3561 C00263 Hypoxanthine 790 C00262 IMP 8582 C00130 Isobutyrate 6590 C02632 Isoleucine 6306 C00407 Lactate 107689 C00186 Leucine 6106 C00123 Lysine 5962 C00047 Mannitol 6251 C00392 Mannose 18950 C00159 NAD+ 5893 C00003 NADH 439153 C00004 NADP+ 5886 C00006 NADPH 5884 C00005 Niacinamide 936 C00153 Nicotinic acid adenine dinucleotide 165490 C00857 O-Phosphocholine 1014 C00588 O-Phosphoethanolamine 1015 C00346 Oxypurinol 4644 C07599 Phenylalanine 6140 C00079 S-Adenosylhomocysteine 439155 C00021 Serine 5951 C00065 Succinate 1110 C00042 Taurine 1123 C00245 Theophylline 9340 C07130 Threonine 6288 C00188 Thymidine 5789 C00214 Tryptophan 6305 C00078 Tyrosine 3382 C00082 UDP-N-Acetylglucosamine 445675 C00043 UDP-galactose 18069 C00052 UDP-glucose 8629 C00029 UDP-glucuronate 17473 C00167 UMP 3405 C00105 Uracil 1174 C00106 Uridine 6029 C00299 Valine 6287 C00183 myo-Inositol 892 C00137 sn-Glycero-3-phosphocholine 439285 C00670 β-Alanine 239 C00099 π-Methylhistidine 4381 C01152 τ-Methylhistidine 92105 C01152 METABOLITES_END #END