#METABOLOMICS WORKBENCH iuk41_20240328_121846 DATATRACK_ID:4749 STUDY_ID:ST003149 ANALYSIS_ID:AN005167 PROJECT_ID:PR001958 VERSION 1 CREATED_ON 08-28-2024 #PROJECT PR:PROJECT_TITLE Impact of early-life exposure to a potent aryl hydrocarbon receptor ligand on PR:PROJECT_TITLE gut microbiota and host glucose homeostasis in C57BL/6J male mice PR:PROJECT_SUMMARY This study aimed to explore the association between early-life exposure to a PR:PROJECT_SUMMARY potent aryl hydrocarbon receptor (AHR) agonist and persistent disruptions in the PR:PROJECT_SUMMARY microbiota, leading to impaired metabolic homeostasis later in life. This study PR:PROJECT_SUMMARY utilized metagenomics, NMR- and mass spectrometry-based metabolomics, and PR:PROJECT_SUMMARY biochemical assays to analyze the gut microbiome composition and function, as PR:PROJECT_SUMMARY well as the physiological and metabolic effects of early-life exposure to PR:PROJECT_SUMMARY 2,3,7,8-tetrachlorodibenzofuran (TCDF) in conventional, germ-free (GF), and PR:PROJECT_SUMMARY Ahr-null mice. The impact of TCDF on Akkermansia muciniphila (A. muciniphila) in PR:PROJECT_SUMMARY vitro was assessed using optical density (OD 600), flow cytometry, PR:PROJECT_SUMMARY transcriptomics, and mass spectrometry-based metabolomics. TCDF-exposed mice PR:PROJECT_SUMMARY exhibited disruption in the gut microbiome community structure and function, PR:PROJECT_SUMMARY characterized by lower abundances of A. muciniphila, lower levels of cecal short PR:PROJECT_SUMMARY chain fatty acids (SCFAs) and indole-3-lactic acid (ILA), and a reduction in gut PR:PROJECT_SUMMARY hormones GLP-1 and PYY. Importantly, microbial and metabolic phenotypes PR:PROJECT_SUMMARY associated with early-life POP exposure were transferable to GF recipients in PR:PROJECT_SUMMARY the absence of POP carry-over. In addition, AHR-independent interactions between PR:PROJECT_SUMMARY POPs and the microbiota were observed, significantly affected the growth, PR:PROJECT_SUMMARY physiology, gene expression, and metabolic activity of A. muciniphila, resulting PR:PROJECT_SUMMARY in suppressed activity along the ILA pathway. PR:INSTITUTE Pennsylvania State University PR:DEPARTMENT Department of Veterinary and Biomedical Sciences PR:LAST_NAME Koo PR:FIRST_NAME Imhoi PR:ADDRESS 307B Life Science Building PR:EMAIL iuk41@psu.edu PR:PHONE +1 814-865-7803 PR:DOI http://dx.doi.org/10.21228/M8MX5P #STUDY ST:STUDY_TITLE Impact of early-life exposure to a potent aryl hydrocarbon receptor ligand on ST:STUDY_TITLE gut microbiota and host glucose homeostasis in C57BL/6J male mice (Part I) ST:STUDY_SUMMARY This study aimed to explore the association between early-life exposure to a ST:STUDY_SUMMARY potent aryl hydrocarbon receptor (AHR) agonist and persistent disruptions in the ST:STUDY_SUMMARY microbiota, leading to impaired metabolic homeostasis later in life. This study ST:STUDY_SUMMARY utilized metagenomics, NMR- and mass spectrometry-based metabolomics, and ST:STUDY_SUMMARY biochemical assays to analyze the gut microbiome composition and function, as ST:STUDY_SUMMARY well as the physiological and metabolic effects of early-life exposure to ST:STUDY_SUMMARY 2,3,7,8-tetrachlorodibenzofuran (TCDF) in conventional, germ-free (GF), and ST:STUDY_SUMMARY Ahr-null mice. The impact of TCDF on Akkermansia muciniphila (A. muciniphila) in ST:STUDY_SUMMARY vitro was assessed using optical density (OD 600), flow cytometry, ST:STUDY_SUMMARY transcriptomics, and mass spectrometry-based metabolomics. TCDF-exposed mice ST:STUDY_SUMMARY exhibited disruption in the gut microbiome community structure and function, ST:STUDY_SUMMARY characterized by lower abundances of A. muciniphila, lower levels of cecal short ST:STUDY_SUMMARY chain fatty acids (SCFAs) and indole-3-lactic acid (ILA), and a reduction in gut ST:STUDY_SUMMARY hormones GLP-1 and PYY. Importantly, microbial and metabolic phenotypes ST:STUDY_SUMMARY associated with early-life POP exposure were transferable to GF recipients in ST:STUDY_SUMMARY the absence of POP carry-over. In addition, AHR-independent interactions between ST:STUDY_SUMMARY POPs and the microbiota were observed, significantly affected the growth, ST:STUDY_SUMMARY physiology, gene expression, and metabolic activity of A. muciniphila, resulting ST:STUDY_SUMMARY in suppressed activity along the ILA pathway. ST:INSTITUTE Pennsylvania State University ST:DEPARTMENT Department of Veterinary and Biomedical Sciences ST:LAST_NAME Koo ST:FIRST_NAME Imhoi ST:ADDRESS 307B Life Science Building ST:EMAIL iuk41@psu.edu ST:PHONE +1 814-865-7803 ST:SUBMIT_DATE 2024-03-28 #SUBJECT SU:SUBJECT_TYPE Mammal SU:SUBJECT_SPECIES Mus musculus SU:TAXONOMY_ID 10090 SU:AGE_OR_AGE_RANGE 4 weeks to 5 months SU:GENDER Male #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Additional sample data SUBJECT_SAMPLE_FACTORS GF.cecal.content_Akkermansia__10 GF.cecal.content_Akkermansia__10 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:ABX water RAW_FILE_NAME=2.GF mice cecal content_Akkermansia transplantation.10.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_Akkermansia__8 GF.cecal.content_Akkermansia__8 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:ABX water RAW_FILE_NAME=2.GF mice cecal content_Akkermansia transplantation.8.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_Akkermansia__9 GF.cecal.content_Akkermansia__9 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:ABX water RAW_FILE_NAME=2.GF mice cecal content_Akkermansia transplantation.9.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_Akkermansia__1 GF.cecal.content_Akkermansia__1 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia RAW_FILE_NAME=2.GF mice cecal content_Akkermansia transplantation.1.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_Akkermansia__2 GF.cecal.content_Akkermansia__2 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia RAW_FILE_NAME=2.GF mice cecal content_Akkermansia transplantation.2.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_Akkermansia__3 GF.cecal.content_Akkermansia__3 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia RAW_FILE_NAME=2.GF mice cecal content_Akkermansia transplantation.3.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_Akkermansia__4 GF.cecal.content_Akkermansia__4 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia RAW_FILE_NAME=2.GF mice cecal content_Akkermansia transplantation.4.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_Akkermansia__5 GF.cecal.content_Akkermansia__5 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia RAW_FILE_NAME=2.GF mice cecal content_Akkermansia transplantation.5.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_Akkermansia__11 GF.cecal.content_Akkermansia__11 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia +ABX water RAW_FILE_NAME=2.GF mice cecal content_Akkermansia transplantation.11.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_Akkermansia__12 GF.cecal.content_Akkermansia__12 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia +ABX water RAW_FILE_NAME=2.GF mice cecal content_Akkermansia transplantation.12.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_Akkermansia__6 GF.cecal.content_Akkermansia__6 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia +ABX water RAW_FILE_NAME=2.GF mice cecal content_Akkermansia transplantation.6.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_Akkermansia__7 GF.cecal.content_Akkermansia__7 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia +ABX water RAW_FILE_NAME=2.GF mice cecal content_Akkermansia transplantation.7.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_cecal.bacteria__6 GF.cecal.content_cecal.bacteria__6 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group RAW_FILE_NAME=3.GF mice cecal content_cecal bacteria transplantantion.6.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_cecal.bacteria__7 GF.cecal.content_cecal.bacteria__7 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group RAW_FILE_NAME=3.GF mice cecal content_cecal bacteria transplantantion.7.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_cecal.bacteria__8 GF.cecal.content_cecal.bacteria__8 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group RAW_FILE_NAME=3.GF mice cecal content_cecal bacteria transplantantion.8.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_cecal.bacteria__9 GF.cecal.content_cecal.bacteria__9 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group RAW_FILE_NAME=3.GF mice cecal content_cecal bacteria transplantantion.9.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_cecal.bacteria__1 GF.cecal.content_cecal.bacteria__1 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group RAW_FILE_NAME=3.GF mice cecal content_cecal bacteria transplantantion.1.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_cecal.bacteria__2 GF.cecal.content_cecal.bacteria__2 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group RAW_FILE_NAME=3.GF mice cecal content_cecal bacteria transplantantion.2.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_cecal.bacteria__3 GF.cecal.content_cecal.bacteria__3 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group RAW_FILE_NAME=3.GF mice cecal content_cecal bacteria transplantantion.3.fid SUBJECT_SAMPLE_FACTORS GF.cecal.content_cecal.bacteria__4 GF.cecal.content_cecal.bacteria__4 Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group RAW_FILE_NAME=3.GF mice cecal content_cecal bacteria transplantantion.4.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_long__10 cecal.content.with.TCDF_long__10 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=7.mice cecal content with TCDF_long.10.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_long__11 cecal.content.with.TCDF_long__11 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=7.mice cecal content with TCDF_long.11.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_long__12 cecal.content.with.TCDF_long__12 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=7.mice cecal content with TCDF_long.12.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_long__7 cecal.content.with.TCDF_long__7 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=7.mice cecal content with TCDF_long.7.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_long__8 cecal.content.with.TCDF_long__8 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=7.mice cecal content with TCDF_long.8.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_long__9 cecal.content.with.TCDF_long__9 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=7.mice cecal content with TCDF_long.9.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_short__10 cecal.content.with.TCDF_short__10 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=8.mice cecal content with TCDF_short.10.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_short__11 cecal.content.with.TCDF_short__11 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=8.mice cecal content with TCDF_short.11.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_short__12 cecal.content.with.TCDF_short__12 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=8.mice cecal content with TCDF_short.12.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_short__7 cecal.content.with.TCDF_short__7 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=8.mice cecal content with TCDF_short.7.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_short__8 cecal.content.with.TCDF_short__8 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=8.mice cecal content with TCDF_short.8.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_short__9 cecal.content.with.TCDF_short__9 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=8.mice cecal content with TCDF_short.9.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_long__1 cecal.content.with.TCDF_long__1 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=7.mice cecal content with TCDF_long.1.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_long__2 cecal.content.with.TCDF_long__2 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=7.mice cecal content with TCDF_long.2.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_long__3 cecal.content.with.TCDF_long__3 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=7.mice cecal content with TCDF_long.3.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_long__4 cecal.content.with.TCDF_long__4 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=7.mice cecal content with TCDF_long.4.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_long__5 cecal.content.with.TCDF_long__5 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=7.mice cecal content with TCDF_long.5.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_long__6 cecal.content.with.TCDF_long__6 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=7.mice cecal content with TCDF_long.6.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_short__1 cecal.content.with.TCDF_short__1 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=8.mice cecal content with TCDF_short.1.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_short__2 cecal.content.with.TCDF_short__2 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=8.mice cecal content with TCDF_short.2.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_short__3 cecal.content.with.TCDF_short__3 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=8.mice cecal content with TCDF_short.3.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_short__4 cecal.content.with.TCDF_short__4 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=8.mice cecal content with TCDF_short.4.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_short__5 cecal.content.with.TCDF_short__5 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=8.mice cecal content with TCDF_short.5.fid SUBJECT_SAMPLE_FACTORS cecal.content.with.TCDF_short__6 cecal.content.with.TCDF_short__6 Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=8.mice cecal content with TCDF_short.6.fid SUBJECT_SAMPLE_FACTORS AHR.KO.liver.lipid.with.TCDF__4 AHR.KO.liver.lipid.with.TCDF__4 Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=1.AHR KO mice liver lipid with TCDF.4.fid SUBJECT_SAMPLE_FACTORS AHR.KO.liver.lipid.with.TCDF__5 AHR.KO.liver.lipid.with.TCDF__5 Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=1.AHR KO mice liver lipid with TCDF.5.fid SUBJECT_SAMPLE_FACTORS AHR.KO.liver.lipid.with.TCDF__6 AHR.KO.liver.lipid.with.TCDF__6 Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=1.AHR KO mice liver lipid with TCDF.6.fid SUBJECT_SAMPLE_FACTORS AHR.KO.liver.lipid.with.TCDF__8 AHR.KO.liver.lipid.with.TCDF__8 Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=1.AHR KO mice liver lipid with TCDF.8.fid SUBJECT_SAMPLE_FACTORS AHR.KO.liver.lipid.with.TCDF__1 AHR.KO.liver.lipid.with.TCDF__1 Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=1.AHR KO mice liver lipid with TCDF.1.fid SUBJECT_SAMPLE_FACTORS AHR.KO.liver.lipid.with.TCDF__2 AHR.KO.liver.lipid.with.TCDF__2 Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=1.AHR KO mice liver lipid with TCDF.2.fid SUBJECT_SAMPLE_FACTORS AHR.KO.liver.lipid.with.TCDF__3 AHR.KO.liver.lipid.with.TCDF__3 Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=1.AHR KO mice liver lipid with TCDF.3.fid SUBJECT_SAMPLE_FACTORS AHR.KO.liver.lipid.with.TCDF__7 AHR.KO.liver.lipid.with.TCDF__7 Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=1.AHR KO mice liver lipid with TCDF.7.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid._cecal.bacteria__10 GF.liver.lipid._cecal.bacteria__10 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group RAW_FILE_NAME=4.GF mice liver lipid _cecal bacteria transplantantion.10.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid._cecal.bacteria__6 GF.liver.lipid._cecal.bacteria__6 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group RAW_FILE_NAME=4.GF mice liver lipid _cecal bacteria transplantantion.6.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid._cecal.bacteria__7 GF.liver.lipid._cecal.bacteria__7 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group RAW_FILE_NAME=4.GF mice liver lipid _cecal bacteria transplantantion.7.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid._cecal.bacteria__8 GF.liver.lipid._cecal.bacteria__8 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group RAW_FILE_NAME=4.GF mice liver lipid _cecal bacteria transplantantion.8.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid._cecal.bacteria__9 GF.liver.lipid._cecal.bacteria__9 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group RAW_FILE_NAME=4.GF mice liver lipid _cecal bacteria transplantantion.9.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid._cecal.bacteria__1 GF.liver.lipid._cecal.bacteria__1 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group RAW_FILE_NAME=4.GF mice liver lipid _cecal bacteria transplantantion.1.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid._cecal.bacteria__2 GF.liver.lipid._cecal.bacteria__2 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group RAW_FILE_NAME=4.GF mice liver lipid _cecal bacteria transplantantion.2.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid._cecal.bacteria__3 GF.liver.lipid._cecal.bacteria__3 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group RAW_FILE_NAME=4.GF mice liver lipid _cecal bacteria transplantantion.3.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid._cecal.bacteria__4 GF.liver.lipid._cecal.bacteria__4 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group RAW_FILE_NAME=4.GF mice liver lipid _cecal bacteria transplantantion.4.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid._cecal.bacteria__5 GF.liver.lipid._cecal.bacteria__5 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group RAW_FILE_NAME=4.GF mice liver lipid _cecal bacteria transplantantion.5.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid.with.TCDF__5 GF.liver.lipid.with.TCDF__5 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=5.GF mice liver lipid with TCDF.5.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid.with.TCDF__6 GF.liver.lipid.with.TCDF__6 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=5.GF mice liver lipid with TCDF.6.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid.with.TCDF__7 GF.liver.lipid.with.TCDF__7 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=5.GF mice liver lipid with TCDF.7.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid.with.TCDF__8 GF.liver.lipid.with.TCDF__8 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=5.GF mice liver lipid with TCDF.8.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid.with.TCDF__1 GF.liver.lipid.with.TCDF__1 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=5.GF mice liver lipid with TCDF.1.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid.with.TCDF__2 GF.liver.lipid.with.TCDF__2 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=5.GF mice liver lipid with TCDF.2.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid.with.TCDF__3 GF.liver.lipid.with.TCDF__3 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=5.GF mice liver lipid with TCDF.3.fid SUBJECT_SAMPLE_FACTORS GF.liver.lipid.with.TCDF__4 GF.liver.lipid.with.TCDF__4 Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=5.GF mice liver lipid with TCDF.4.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_long__207 liver.lipid.with.TCDF_long__207 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=9.mice liver lipid with TCDF_long.207.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_long__208 liver.lipid.with.TCDF_long__208 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=9.mice liver lipid with TCDF_long.208.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_long__209 liver.lipid.with.TCDF_long__209 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=9.mice liver lipid with TCDF_long.209.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_long__210 liver.lipid.with.TCDF_long__210 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=9.mice liver lipid with TCDF_long.210.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_long__211 liver.lipid.with.TCDF_long__211 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=9.mice liver lipid with TCDF_long.211.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_long__212 liver.lipid.with.TCDF_long__212 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=9.mice liver lipid with TCDF_long.212.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_short__107 liver.lipid.with.TCDF_short__107 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=10.mice liver lipid with TCDF_short.107.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_short__108 liver.lipid.with.TCDF_short__108 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=10.mice liver lipid with TCDF_short.108.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_short__109 liver.lipid.with.TCDF_short__109 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=10.mice liver lipid with TCDF_short.109.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_short__110 liver.lipid.with.TCDF_short__110 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=10.mice liver lipid with TCDF_short.110.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_short__111 liver.lipid.with.TCDF_short__111 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=10.mice liver lipid with TCDF_short.111.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_short__112 liver.lipid.with.TCDF_short__112 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=10.mice liver lipid with TCDF_short.112.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_.long__10 liver.with.TCDF_.long__10 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=11.mice liver with TCDF_ long.10.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_.long__11 liver.with.TCDF_.long__11 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=11.mice liver with TCDF_ long.11.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_.long__12 liver.with.TCDF_.long__12 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=11.mice liver with TCDF_ long.12.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_.long__7 liver.with.TCDF_.long__7 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=11.mice liver with TCDF_ long.7.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_.long__8 liver.with.TCDF_.long__8 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=11.mice liver with TCDF_ long.8.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_.long__9 liver.with.TCDF_.long__9 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=11.mice liver with TCDF_ long.9.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_short__10 liver.with.TCDF_short__10 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=12.mice liver with TCDF_short.10.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_short__11 liver.with.TCDF_short__11 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=12.mice liver with TCDF_short.11.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_short__12 liver.with.TCDF_short__12 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=12.mice liver with TCDF_short.12.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_short__7 liver.with.TCDF_short__7 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=12.mice liver with TCDF_short.7.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_short__8 liver.with.TCDF_short__8 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=12.mice liver with TCDF_short.8.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_short__9 liver.with.TCDF_short__9 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=12.mice liver with TCDF_short.9.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_long__201 liver.lipid.with.TCDF_long__201 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=9.mice liver lipid with TCDF_long.201.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_long__202 liver.lipid.with.TCDF_long__202 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=9.mice liver lipid with TCDF_long.202.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_long__203 liver.lipid.with.TCDF_long__203 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=9.mice liver lipid with TCDF_long.203.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_long__204 liver.lipid.with.TCDF_long__204 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=9.mice liver lipid with TCDF_long.204.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_long__205 liver.lipid.with.TCDF_long__205 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=9.mice liver lipid with TCDF_long.205.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_long__206 liver.lipid.with.TCDF_long__206 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=9.mice liver lipid with TCDF_long.206.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_short__101 liver.lipid.with.TCDF_short__101 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=10.mice liver lipid with TCDF_short.101.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_short__102 liver.lipid.with.TCDF_short__102 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=10.mice liver lipid with TCDF_short.102.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_short__103 liver.lipid.with.TCDF_short__103 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=10.mice liver lipid with TCDF_short.103.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_short__104 liver.lipid.with.TCDF_short__104 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=10.mice liver lipid with TCDF_short.104.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_short__105 liver.lipid.with.TCDF_short__105 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=10.mice liver lipid with TCDF_short.105.fid SUBJECT_SAMPLE_FACTORS liver.lipid.with.TCDF_short__106 liver.lipid.with.TCDF_short__106 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=10.mice liver lipid with TCDF_short.106.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_.long__1 liver.with.TCDF_.long__1 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=11.mice liver with TCDF_ long.1.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_.long__2 liver.with.TCDF_.long__2 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=11.mice liver with TCDF_ long.2.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_.long__3 liver.with.TCDF_.long__3 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=11.mice liver with TCDF_ long.3.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_.long__4 liver.with.TCDF_.long__4 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=11.mice liver with TCDF_ long.4.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_.long__5 liver.with.TCDF_.long__5 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=11.mice liver with TCDF_ long.5.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_.long__6 liver.with.TCDF_.long__6 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=11.mice liver with TCDF_ long.6.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_short__1 liver.with.TCDF_short__1 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=12.mice liver with TCDF_short.1.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_short__2 liver.with.TCDF_short__2 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=12.mice liver with TCDF_short.2.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_short__3 liver.with.TCDF_short__3 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=12.mice liver with TCDF_short.3.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_short__4 liver.with.TCDF_short__4 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=12.mice liver with TCDF_short.4.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_short__5 liver.with.TCDF_short__5 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=12.mice liver with TCDF_short.5.fid SUBJECT_SAMPLE_FACTORS liver.with.TCDF_short__6 liver.with.TCDF_short__6 Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=12.mice liver with TCDF_short.6.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_long__10 urine.with.TCDF_long__10 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=13.mice urine with TCDF_long.10.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_long__11 urine.with.TCDF_long__11 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=13.mice urine with TCDF_long.11.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_long__12 urine.with.TCDF_long__12 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=13.mice urine with TCDF_long.12.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_long__7 urine.with.TCDF_long__7 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=13.mice urine with TCDF_long.7.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_long__8 urine.with.TCDF_long__8 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=13.mice urine with TCDF_long.8.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_long__9 urine.with.TCDF_long__9 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=13.mice urine with TCDF_long.9.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_short__10 urine.with.TCDF_short__10 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=14.mice urine with TCDF_short.10.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_short__11 urine.with.TCDF_short__11 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=14.mice urine with TCDF_short.11.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_short__12 urine.with.TCDF_short__12 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=14.mice urine with TCDF_short.12.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_short__7 urine.with.TCDF_short__7 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=14.mice urine with TCDF_short.7.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_short__8 urine.with.TCDF_short__8 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=14.mice urine with TCDF_short.8.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_short__9 urine.with.TCDF_short__9 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF RAW_FILE_NAME=14.mice urine with TCDF_short.9.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_long__1 urine.with.TCDF_long__1 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=13.mice urine with TCDF_long.1.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_long__2 urine.with.TCDF_long__2 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=13.mice urine with TCDF_long.2.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_long__3 urine.with.TCDF_long__3 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=13.mice urine with TCDF_long.3.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_long__4 urine.with.TCDF_long__4 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=13.mice urine with TCDF_long.4.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_long__5 urine.with.TCDF_long__5 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=13.mice urine with TCDF_long.5.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_long__6 urine.with.TCDF_long__6 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=13.mice urine with TCDF_long.6.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_short__1 urine.with.TCDF_short__1 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=14.mice urine with TCDF_short.1.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_short__2 urine.with.TCDF_short__2 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=14.mice urine with TCDF_short.2.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_short__3 urine.with.TCDF_short__3 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=14.mice urine with TCDF_short.3.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_short__4 urine.with.TCDF_short__4 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=14.mice urine with TCDF_short.4.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_short__5 urine.with.TCDF_short__5 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=14.mice urine with TCDF_short.5.fid SUBJECT_SAMPLE_FACTORS urine.with.TCDF_short__6 urine.with.TCDF_short__6 Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle RAW_FILE_NAME=14.mice urine with TCDF_short.6.fid #COLLECTION CO:COLLECTION_SUMMARY Liver, cecal content, and intestinal tissue samples were collected immediately CO:COLLECTION_SUMMARY after sacrifice by carbon dioxide asphyxiation and kept at -80°C. Urine and CO:COLLECTION_SUMMARY feces were collected using separate cages before sacrifice and kept at -80°C. CO:SAMPLE_TYPE liver, cecal content, urine #TREATMENT TR:TREATMENT_SUMMARY 1. After feed training, mice were fed pills containing TCDF (dissolved in TR:TREATMENT_SUMMARY acetone) or acetone alone as vehicle, and one pill uniformly contained 0.46 µg TR:TREATMENT_SUMMARY TCDF (24 µg/kg as final dose). Mice were housed singly in an empty cage and TR:TREATMENT_SUMMARY monitored to ensure the pill was consumed in the morning for 5 days. 2. TCDF (24 TR:TREATMENT_SUMMARY µg/kg) or corn oil as vehicle were administered to age-matched male GF and TR:TREATMENT_SUMMARY Ahr-/- mice by oral gavage once daily for five days (n = 4 per group). 3. TR:TREATMENT_SUMMARY Four-week-old male GF C57BL/6J mice were orally gavaged with 100 µL of cecal TR:TREATMENT_SUMMARY suspension (100 mg in 1 mL sterile BHI CHV media) from vehicle or TCDF treated TR:TREATMENT_SUMMARY mice in long-duration model. 4. A. muciniphila was administered to GF mice by TR:TREATMENT_SUMMARY oral gavage at one dose 107 CFU/0.1 mL suspended in sterile BHI CHV media TR:TREATMENT_SUMMARY containing an end concentration of glycerol (15% vol/vol). #SAMPLEPREP SP:SAMPLEPREP_SUMMARY For preparation of urine samples, 550 μL urine was blended with 55 μL of SP:SAMPLEPREP_SUMMARY phosphate buffer (K2HPO4/NaH2PO4, 1.5 M, pH 7.4, 100% D2O) containing 0.01% TSP SP:SAMPLEPREP_SUMMARY for chemical shift reference (δ0.00). After centrifugation (11 180 ×g, 4 SP:SAMPLEPREP_SUMMARY °C) for 10 min, 550 μL supernatant was transferred into 5 mm NMR tubes for NMR SP:SAMPLEPREP_SUMMARY analysis. Each liver tissue sample (55 ± 5 mg) was extracted three times with SP:SAMPLEPREP_SUMMARY 600 μL of methanol/H2O (2:1) using a Qiagen tissue-lyzer. Three resultant SP:SAMPLEPREP_SUMMARY supernatants were combined and subjected to centrifugation (16 099 ×g, 4 °C, SP:SAMPLEPREP_SUMMARY 10 min). After removing methanol in vacuo, the resultant supernatant was SP:SAMPLEPREP_SUMMARY lyophilized, weighed, and reconstituted into 600 μL phosphate buffer (0.1 M, SP:SAMPLEPREP_SUMMARY K2HPO4/NaH2PO4, pH 7.4) containing 0.005% TSP, 50% D2O and 0.01% NaN3. After SP:SAMPLEPREP_SUMMARY final centrifugation (16 099 ×g, 4 °C, 10 min), each supernatant (550 μL) SP:SAMPLEPREP_SUMMARY was transferred into a 5 mm NMR tube for NMR analysis. Each fecal sample (55 ± SP:SAMPLEPREP_SUMMARY 5 mg) were extracted twice with 500 μL phosphate buffer (0.1 M, K2HPO4/NaH2PO4, SP:SAMPLEPREP_SUMMARY pH 7.4) containing 0.005% TSP, 30% D2O and 0.01% NaN3. After centrifugation SP:SAMPLEPREP_SUMMARY (16 099 ×g, 4 °C, 10 min), 600 μL combined supernatants were transferred SP:SAMPLEPREP_SUMMARY into 5 mm NMR tubes for NMR analysis. For liver lipid quantification, 50 mg of SP:SAMPLEPREP_SUMMARY liver tissue was homogenized in 1 mL pre-cooled chloroform/methanol mix [1:1 SP:SAMPLEPREP_SUMMARY (v/v)], followed by adding 296 µL water. After centrifugation (10,000 g, 4°C) SP:SAMPLEPREP_SUMMARY for 10 min, the lower phase was dried in a vacuum and reconstituted in 600 µL SP:SAMPLEPREP_SUMMARY of deuterated chloroform containing 0.03% (v/v) tetramethylsilane (TMS). #CHROMATOGRAPHY #ANALYSIS AN:ANALYSIS_TYPE NMR AN:ANALYSIS_PROTOCOL_FILE PSU_Protocol_for_NMR_metabolomics.pdf #NMR NM:INSTRUMENT_NAME Bruker Avance NEO 600 MHz NM:INSTRUMENT_TYPE FT-NMR NM:NMR_EXPERIMENT_TYPE 1D-1H NM:SPECTROMETER_FREQUENCY 600 MHz #NMR_METABOLITE_DATA NMR_METABOLITE_DATA:UNITS µmol/g NMR_METABOLITE_DATA_START Samples GF.cecal.content_Akkermansia__10 GF.cecal.content_Akkermansia__8 GF.cecal.content_Akkermansia__9 GF.cecal.content_Akkermansia__1 GF.cecal.content_Akkermansia__2 GF.cecal.content_Akkermansia__3 GF.cecal.content_Akkermansia__4 GF.cecal.content_Akkermansia__5 GF.cecal.content_Akkermansia__11 GF.cecal.content_Akkermansia__12 GF.cecal.content_Akkermansia__6 GF.cecal.content_Akkermansia__7 GF.cecal.content_cecal.bacteria__6 GF.cecal.content_cecal.bacteria__7 GF.cecal.content_cecal.bacteria__8 GF.cecal.content_cecal.bacteria__9 GF.cecal.content_cecal.bacteria__1 GF.cecal.content_cecal.bacteria__2 GF.cecal.content_cecal.bacteria__3 GF.cecal.content_cecal.bacteria__4 cecal.content.with.TCDF_long__10 cecal.content.with.TCDF_long__11 cecal.content.with.TCDF_long__12 cecal.content.with.TCDF_long__7 cecal.content.with.TCDF_long__8 cecal.content.with.TCDF_long__9 cecal.content.with.TCDF_short__10 cecal.content.with.TCDF_short__11 cecal.content.with.TCDF_short__12 cecal.content.with.TCDF_short__7 cecal.content.with.TCDF_short__8 cecal.content.with.TCDF_short__9 cecal.content.with.TCDF_long__1 cecal.content.with.TCDF_long__2 cecal.content.with.TCDF_long__3 cecal.content.with.TCDF_long__4 cecal.content.with.TCDF_long__5 cecal.content.with.TCDF_long__6 cecal.content.with.TCDF_short__1 cecal.content.with.TCDF_short__2 cecal.content.with.TCDF_short__3 cecal.content.with.TCDF_short__4 cecal.content.with.TCDF_short__5 cecal.content.with.TCDF_short__6 AHR.KO.liver.lipid.with.TCDF__4 AHR.KO.liver.lipid.with.TCDF__5 AHR.KO.liver.lipid.with.TCDF__6 AHR.KO.liver.lipid.with.TCDF__8 AHR.KO.liver.lipid.with.TCDF__1 AHR.KO.liver.lipid.with.TCDF__2 AHR.KO.liver.lipid.with.TCDF__3 AHR.KO.liver.lipid.with.TCDF__7 GF.liver.lipid._cecal.bacteria__10 GF.liver.lipid._cecal.bacteria__6 GF.liver.lipid._cecal.bacteria__7 GF.liver.lipid._cecal.bacteria__8 GF.liver.lipid._cecal.bacteria__9 GF.liver.lipid._cecal.bacteria__1 GF.liver.lipid._cecal.bacteria__2 GF.liver.lipid._cecal.bacteria__3 GF.liver.lipid._cecal.bacteria__4 GF.liver.lipid._cecal.bacteria__5 GF.liver.lipid.with.TCDF__5 GF.liver.lipid.with.TCDF__6 GF.liver.lipid.with.TCDF__7 GF.liver.lipid.with.TCDF__8 GF.liver.lipid.with.TCDF__1 GF.liver.lipid.with.TCDF__2 GF.liver.lipid.with.TCDF__3 GF.liver.lipid.with.TCDF__4 liver.lipid.with.TCDF_long__207 liver.lipid.with.TCDF_long__208 liver.lipid.with.TCDF_long__209 liver.lipid.with.TCDF_long__210 liver.lipid.with.TCDF_long__211 liver.lipid.with.TCDF_long__212 liver.lipid.with.TCDF_short__107 liver.lipid.with.TCDF_short__108 liver.lipid.with.TCDF_short__109 liver.lipid.with.TCDF_short__110 liver.lipid.with.TCDF_short__111 liver.lipid.with.TCDF_short__112 liver.with.TCDF_.long__10 liver.with.TCDF_.long__11 liver.with.TCDF_.long__12 liver.with.TCDF_.long__7 liver.with.TCDF_.long__8 liver.with.TCDF_.long__9 liver.with.TCDF_short__10 liver.with.TCDF_short__11 liver.with.TCDF_short__12 liver.with.TCDF_short__7 liver.with.TCDF_short__8 liver.with.TCDF_short__9 liver.lipid.with.TCDF_long__201 liver.lipid.with.TCDF_long__202 liver.lipid.with.TCDF_long__203 liver.lipid.with.TCDF_long__204 liver.lipid.with.TCDF_long__205 liver.lipid.with.TCDF_long__206 liver.lipid.with.TCDF_short__101 liver.lipid.with.TCDF_short__102 liver.lipid.with.TCDF_short__103 liver.lipid.with.TCDF_short__104 liver.lipid.with.TCDF_short__105 liver.lipid.with.TCDF_short__106 liver.with.TCDF_.long__1 liver.with.TCDF_.long__2 liver.with.TCDF_.long__3 liver.with.TCDF_.long__4 liver.with.TCDF_.long__5 liver.with.TCDF_.long__6 liver.with.TCDF_short__1 liver.with.TCDF_short__2 liver.with.TCDF_short__3 liver.with.TCDF_short__4 liver.with.TCDF_short__5 liver.with.TCDF_short__6 urine.with.TCDF_long__10 urine.with.TCDF_long__11 urine.with.TCDF_long__12 urine.with.TCDF_long__7 urine.with.TCDF_long__8 urine.with.TCDF_long__9 urine.with.TCDF_short__10 urine.with.TCDF_short__11 urine.with.TCDF_short__12 urine.with.TCDF_short__7 urine.with.TCDF_short__8 urine.with.TCDF_short__9 urine.with.TCDF_long__1 urine.with.TCDF_long__2 urine.with.TCDF_long__3 urine.with.TCDF_long__4 urine.with.TCDF_long__5 urine.with.TCDF_long__6 urine.with.TCDF_short__1 urine.with.TCDF_short__2 urine.with.TCDF_short__3 urine.with.TCDF_short__4 urine.with.TCDF_short__5 urine.with.TCDF_short__6 Factors Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:ABX water Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:ABX water Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:ABX water Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia +ABX water Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia +ABX water Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia +ABX water Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:Akkermansia +ABX water Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group Sample source:cecal content | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:cecal content | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:Ahr-/- C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from TCDF group Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:cecal gavage from vehicle group Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:GF C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:liver | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:TCDF Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle Sample source:urine | Genotype:WT C57BL/6J mice | Treatment:vehicle Acetate 0.3242 0.2712 0.3681 0.6139 0.6503 0.6513 0.8700 0.9264 0.5088 0.5242 0.3444 0.3467 19.6036 12.5509 16.9418 12.6709 23.4873 25.2327 17.2582 24.8836 33.3520 36.1478 36.1800 34.0301 35.5678 28.1112 31.9056 26.1715 37.3935 37.9734 26.6431 47.4504 38.7861 41.4265 38.9737 31.4177 44.1592 43.8440 18.3657 39.4154 30.1678 24.8776 41.7682 52.3333 Butyrate 0.0545 0.0237 0.0663 0.1861 0.1587 0.1855 0.0767 0.0704 0.0386 0.0860 0.0508 0.0578 4.3200 2.2527 3.0164 2.4600 5.0073 6.9873 4.2164 5.4818 7.7072 6.1657 6.5431 7.1402 7.7763 5.8007 10.6161 8.6549 11.9579 9.8158 6.3736 17.7630 11.3048 11.0566 8.7557 8.2091 9.5981 9.9659 3.6191 7.9807 6.3384 6.7676 10.5811 15.6128 CE 3.6985 3.8762 2.6368 2.7538 3.5352 3.6760 5.1862 1.8728 2.8486 2.8185 3.7359 2.6941 2.7779 3.2074 1.9648 3.0481 2.7137 3.2914 2.9609 3.3193 2.9806 3.0572 2.8943 3.0480 2.9429 3.0425 3.6241 2.9748 3.7603 3.4581 3.9784 3.2034 3.6672 4.1514 3.1919 3.3706 3.2619 3.6500 2.7468 2.7578 3.1478 3.0261 3.3200 3.4994 2.3737 3.4097 2.5228 2.7647 2.7677 2.0986 FC 6.7912 6.6551 7.3752 7.5820 5.9566 6.4135 5.2054 5.7618 5.0177 4.9221 5.6774 4.3720 4.5424 5.3542 3.1340 4.7060 4.9006 4.9703 5.5467 6.9827 5.8209 6.3354 6.2194 6.4845 5.5284 6.0592 5.7448 4.2790 5.1085 6.9800 5.4374 4.7119 6.6897 7.7951 6.2700 6.1370 6.0428 7.3663 3.8296 3.2064 5.0640 4.0061 4.8741 4.2676 4.6502 5.9292 5.6509 5.2965 5.3817 4.0699 Glucose 39.7111 78.7489 47.7767 81.0128 30.3362 37.2586 38.4041 40.2208 144.8771 135.6114 132.9753 123.8619 121.5149 126.8191 74.7347 62.4669 70.5491 69.5639 73.1273 69.7216 103.0413 101.0058 134.6952 115.9444 151.0738 141.1366 66.0290 75.7934 70.4174 63.6305 85.1961 76.7071 Glycogen 7.6427 29.6938 5.7603 21.7857 8.7010 21.8356 7.0724 17.4123 62.0039 55.7414 58.8778 63.9624 57.3235 78.7366 33.8517 31.9829 31.3800 32.2731 32.7845 34.8502 55.7710 56.4898 57.8339 47.3301 52.4307 50.3964 19.9411 26.8574 25.9732 23.8113 39.4792 30.9388 LPC 2.4245 2.7446 2.0612 2.0935 2.2128 2.3549 2.3747 1.7339 2.4140 2.2537 2.2948 2.2569 2.3045 2.4450 1.4147 2.3425 2.2367 2.3876 2.3961 3.9295 2.6887 2.9904 3.5695 3.4827 2.9127 2.9931 2.5781 2.2980 2.2266 3.5809 2.2848 2.0621 10.1208 4.0010 12.5752 3.0153 2.8437 3.8249 3.3137 1.7139 4.0667 2.2830 2.1411 2.2588 1.9853 3.5872 3.5127 2.2291 2.8286 2.3765 MUFA 37.6028 36.5876 34.5841 37.6333 49.4558 36.0627 36.6694 36.3620 65.7369 61.7990 65.6452 58.9014 62.9899 64.7066 43.6829 60.6050 66.7576 72.1110 49.8542 52.4781 49.2828 48.6056 36.3332 34.0695 34.2838 29.0254 41.6615 36.2156 35.7813 80.8241 45.6010 33.1852 101.8587 88.8099 97.4017 83.5828 67.4269 89.2481 33.9785 24.7699 48.0250 32.8860 34.9148 36.5301 38.2823 49.8125 35.7885 69.6435 48.3817 32.4828 PC 21.1864 20.5744 19.9072 22.6504 22.1427 20.1337 21.3557 17.0815 21.3414 20.6393 19.0121 17.9548 18.8901 20.7702 13.5644 18.9901 19.4989 19.5686 25.6742 27.4785 26.4786 29.0257 22.2700 22.2205 21.8432 22.1776 25.0519 19.4148 24.4490 23.9003 20.5198 21.5129 16.4485 30.1492 17.9391 22.9596 26.4818 27.6631 15.7591 15.7759 21.6722 18.8879 21.5699 21.8999 18.4306 13.7272 19.7715 20.7982 18.1819 17.0655 PE 11.4748 11.9797 10.8442 11.2054 11.2426 11.0656 10.5061 10.2449 14.8948 13.7810 13.3735 12.4993 13.5870 15.2449 9.1795 13.2794 13.4573 14.2669 12.1554 16.1800 13.8134 15.0176 16.3834 14.7439 13.2270 14.2705 16.7105 12.9067 15.2900 14.5941 12.8461 14.6472 14.7173 19.1213 16.5109 13.9384 15.7195 16.8319 11.6091 11.3209 14.6082 13.0106 12.8658 14.1438 13.3190 11.6852 14.9304 14.9501 13.7212 12.0826 Propionate 0.0121 0.0169 0.0221 0.0356 0.0735 0.0632 0.0733 0.1564 0.0140 0.0246 0.0544 0.0068 5.0073 3.5018 3.2673 2.4927 4.4291 3.6982 3.3545 4.2982 9.7171 9.9729 9.8703 11.2388 9.0800 9.5309 7.2422 5.2665 6.6477 7.5135 6.4785 8.9849 10.2659 10.2747 8.3645 8.0215 9.9382 8.3328 2.8088 8.7640 5.6133 5.2810 10.4060 9.9359 PUFA 67.8688 68.1328 55.6365 58.7630 64.2771 65.7764 67.1817 51.4002 81.6290 79.8611 91.3710 76.3563 76.1930 83.2142 56.2646 80.0960 85.3432 92.6605 69.1947 81.2059 77.1686 79.7620 69.2720 68.5498 64.1811 65.8618 76.0830 64.3633 73.6515 86.9639 78.8517 64.7177 98.2066 101.7371 93.9826 83.8544 85.6975 97.8364 59.3091 56.0892 67.3055 61.9624 61.1666 70.3282 62.4821 76.5326 70.6266 98.8132 77.1136 58.4191 SFA 52.1734 53.2607 46.8260 51.6103 60.8269 53.3084 51.8741 47.3289 35.1379 37.1338 41.3863 38.7086 32.5757 36.4997 28.2671 37.8818 49.5622 49.9866 54.1621 58.3015 56.2018 62.5421 59.9284 57.4587 56.5631 58.3804 65.1347 52.9267 61.5132 78.4697 71.5760 57.3126 32.5403 74.4039 24.4853 58.6223 59.3250 59.4924 42.6783 47.7745 56.5741 50.3229 49.3374 59.0509 53.5673 58.8910 61.7602 82.9989 64.3044 49.8828 TC 10.4897 10.5312 10.0121 10.3358 9.4919 10.0895 10.3917 7.6346 7.8663 7.7406 9.4133 7.0661 7.3203 8.5616 5.0987 7.7541 7.6144 8.2617 8.5076 10.3020 8.8015 9.3926 9.1137 9.5324 8.4713 9.1017 9.3690 7.2538 8.8687 8.4381 7.4158 7.9154 10.3569 11.9466 9.4619 9.5076 9.3047 11.0163 6.5765 5.9642 8.2118 7.0322 8.1941 7.7670 7.0240 9.3389 8.1737 8.0612 8.1494 6.1685 TG 12.1730 11.5753 9.8192 10.7227 19.1981 12.0103 10.7541 14.7386 14.9345 14.4826 17.3100 16.2568 8.4011 7.8596 10.4868 8.6343 total FA 157.6450 157.9810 137.0467 148.0066 174.5598 155.1475 155.7252 135.0911 182.5038 178.7939 198.4025 173.9663 171.7586 184.4204 128.2146 178.5828 201.6631 214.7581 173.2110 191.9855 182.6532 190.9097 165.5336 160.0780 155.0280 153.2675 182.8791 153.5055 170.9460 246.2577 196.0287 155.2156 232.6057 264.9508 215.8696 226.0595 212.4494 246.5769 135.9659 128.6336 171.9046 145.1712 145.4188 165.9092 154.3317 185.2361 168.1752 251.4556 189.7997 140.7847 UDP-glucose 0.4854 0.3277 0.5966 0.4567 0.1395 0.3019 0.3201 0.3232 0.4271 0.5129 0.4192 0.2512 0.3196 0.3490 0.4414 0.3587 0.4259 0.3642 0.4043 0.4454 0.1309 0.1554 0.1837 0.1338 0.2850 0.2305 0.4109 0.2898 0.3819 0.2699 0.2186 0.2669 UFA 105.4716 104.7203 90.2207 96.3963 113.7329 101.8391 103.8511 87.7622 116.7669 116.9949 132.7574 115.0650 108.7687 119.7139 84.5316 117.9778 134.9055 142.6471 119.0489 133.6840 126.4514 128.3677 105.6052 102.6193 98.4649 94.8872 117.7445 100.5789 109.4328 167.7880 124.4527 97.9029 200.0653 190.5469 191.3843 167.4373 153.1244 187.0845 93.2876 80.8591 115.3305 94.8483 96.0814 106.8583 100.7644 126.3451 106.4151 168.4567 125.4953 90.9019 Urine hippurate 0.0049 0.0038 0.0048 0.0058 0.0047 0.0054 0.0070 0.0058 0.0056 0.0057 0.0049 0.0066 0.0044 0.0074 0.0058 0.0069 0.0071 0.0063 0.0053 0.0051 0.0053 0.0065 0.0058 0.0053 Urine indoxyl sulfate 0.0030 0.0021 0.0026 0.0030 0.0029 0.0029 0.0034 0.0034 0.0029 0.0026 0.0026 0.0032 0.0035 0.0038 0.0040 0.0035 0.0035 0.0038 0.0029 0.0028 0.0029 0.0028 0.0027 0.0034 NMR_METABOLITE_DATA_END #METABOLITES METABOLITES_START metabolite_name pubchem_id inchi_key kegg_id other_id other_id_type ri ri_type moverz_quant Acetate 175 Butyrate 264 CE 23974 FC 18218231 Glucose 5793 Glycogen 439177 LPC MUFA PC PE Propionate 104745 PUFA SFA 5388925 TC 23957 TG 2723601 total FA UDP-glucose 8629 UFA Urine hippurate Urine indoxyl sulfate METABOLITES_END #END