#METABOLOMICS WORKBENCH spinelli_lab_20240514_125536 DATATRACK_ID:4843 STUDY_ID:ST003214 ANALYSIS_ID:AN005270 PROJECT_ID:PR001988 VERSION 1 CREATED_ON May 21, 2024, 11:49 am #PROJECT PR:PROJECT_TITLE Rhodoquinone is an Electron Carrier in the Mammalian Electron Transport Chain PR:PROJECT_SUMMARY Ubiquinone (UQ), the only known electron carrier in the mammalian electron PR:PROJECT_SUMMARY transport chain (ETC), delivers electrons to both oxygen (O2) and fumarate as PR:PROJECT_SUMMARY terminal electron acceptors. As fumarate has a lower reduction potential than PR:PROJECT_SUMMARY UQ, fumarate reduction is only thermodynamically favorable when ubiquinol, the PR:PROJECT_SUMMARY reduced form of UQ, accumulates. Paradoxically, some tissues reduce fumarate PR:PROJECT_SUMMARY without ubiquinol buildup, suggesting another mechanism enables fumarate PR:PROJECT_SUMMARY reduction in mammals. Here, we identify rhodoquinone (RQ), a novel component of PR:PROJECT_SUMMARY the mammalian ETC that carries electrons to fumarate, instead of O2, as the PR:PROJECT_SUMMARY terminal electron acceptor. RQ, which is undetectable in cultured mammalian PR:PROJECT_SUMMARY cells, is enriched in mitochondria from mouse and human tissues that catalyze PR:PROJECT_SUMMARY high levels of fumarate reduction. UQ and RQ-directed ETC circuits support PR:PROJECT_SUMMARY unique programs of mitochondrial function. Through expression of a bacterial PR:PROJECT_SUMMARY enzyme that converts UQ into RQ and development of a novel RQ analog, we PR:PROJECT_SUMMARY demonstrate that reprogramming the mammalian ETC from the UQ to RQ circuit PR:PROJECT_SUMMARY renders cells highly resistant to hypoxia exposure in vitro and in vivo. Thus, PR:PROJECT_SUMMARY we establish RQ as a fundamental component of the mammalian ETC and unveil that PR:PROJECT_SUMMARY reprogramming the ETC to the RQ-circuit is a tractable strategy to ameliorate PR:PROJECT_SUMMARY hypoxia-related conditions. PR:INSTITUTE UMass Chan Medical School PR:LAST_NAME UMass Chan PR:FIRST_NAME Spinelli Lab PR:ADDRESS 55 Lake Avenue North, Worcester, Massachusetts, 01605, USA PR:EMAIL spinellilab@gmail.com PR:PHONE (508) 856-8989 ext. 68148 #STUDY ST:STUDY_TITLE Glutamine Tracing Assay in RquA AAV Injected Mice with a Standard Curve ST:STUDY_SUMMARY The extraction of RquA AAV injected livers from C57BL/6 mice. Metabolites from ST:STUDY_SUMMARY the liver were used to measure fumarate reduction and succinate oxidation. ST:STUDY_SUMMARY Glutamine tracing was used to determine forward and reverse direction of the TCA ST:STUDY_SUMMARY cycle. Standards were used to create a standard curve by diluting down a stock ST:STUDY_SUMMARY of fumarate and succinate standard mixture. The standard curve was used to ST:STUDY_SUMMARY determine picomoles of metabolites in the TCA cycle. ST:INSTITUTE UMass Chan Medical School ST:LAST_NAME UMass Chan ST:FIRST_NAME Spinelli Lab ST:ADDRESS 55 Lake Avenue North, Worcester, Massachusetts, 01605, USA ST:EMAIL spinellilab@gmail.com ST:PHONE (508) 856-8989 ext. 68148 #SUBJECT SU:SUBJECT_TYPE Mammal SU:SUBJECT_SPECIES Mus musculus SU:TAXONOMY_ID 10090 #FACTORS #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data SUBJECT_SAMPLE_FACTORS - Standard 2 Sample source:Succinate and Fumarate Reagent Mixture | Standards for Standard Curve and Treatment:Measurable Standard Curve RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar01 SUBJECT_SAMPLE_FACTORS - Standard 3 Sample source:Succinate and Fumarate Reagent Mixture | Standards for Standard Curve and Treatment:Measurable Standard Curve RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar02 SUBJECT_SAMPLE_FACTORS - Standard 4 Sample source:Succinate and Fumarate Reagent Mixture | Standards for Standard Curve and Treatment:Measurable Standard Curve RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar03 SUBJECT_SAMPLE_FACTORS - Standard 5 Sample source:Succinate and Fumarate Reagent Mixture | Standards for Standard Curve and Treatment:Measurable Standard Curve RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar04 SUBJECT_SAMPLE_FACTORS - Standard 6 Sample source:Succinate and Fumarate Reagent Mixture | Standards for Standard Curve and Treatment:Measurable Standard Curve RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar05 SUBJECT_SAMPLE_FACTORS - Standard 7 Sample source:Succinate and Fumarate Reagent Mixture | Standards for Standard Curve and Treatment:Measurable Standard Curve RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar06 SUBJECT_SAMPLE_FACTORS - Standard 8 Sample source:Succinate and Fumarate Reagent Mixture | Standards for Standard Curve and Treatment:Measurable Standard Curve RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar07 SUBJECT_SAMPLE_FACTORS - Liver 1 Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:RquA AAV injected RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar08 SUBJECT_SAMPLE_FACTORS - Liver 2 Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:RquA AAV injected RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar09 SUBJECT_SAMPLE_FACTORS - Liver 3 Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:RquA AAV injected RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar10 SUBJECT_SAMPLE_FACTORS - Liver 4 Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:RquA AAV injected RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar11 SUBJECT_SAMPLE_FACTORS - Liver 5 Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:RquA AAV injected RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar12 SUBJECT_SAMPLE_FACTORS - Liver 6 Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:RquA AAV injected RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar13 SUBJECT_SAMPLE_FACTORS - Liver 7 Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar14 SUBJECT_SAMPLE_FACTORS - Liver 8 Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar15 SUBJECT_SAMPLE_FACTORS - Liver 9 Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar16 SUBJECT_SAMPLE_FACTORS - Liver 10 Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar17 SUBJECT_SAMPLE_FACTORS - Liver 11 Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar18 SUBJECT_SAMPLE_FACTORS - Liver 12 Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar19 SUBJECT_SAMPLE_FACTORS - Liver 13 Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar20 SUBJECT_SAMPLE_FACTORS - Liver 15 Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle RAW_FILE_NAME(File Name )=RquA_AAV_mouse_polar21 #COLLECTION CO:COLLECTION_SUMMARY 13C515N2-glutamine (Cambridge Isotope labs) was resuspended to 50 mg/mL in 1X CO:COLLECTION_SUMMARY PBS. C57BL/6 mice between the ages of 10-16 weeks were weighed to allow CO:COLLECTION_SUMMARY injection of 0.75 g/kg intraperitoneally and 0.2 g/kg intravenously via the tail CO:COLLECTION_SUMMARY vein. Mice were injected with the respective amounts of 13C515N2-glutamine, were CO:COLLECTION_SUMMARY sacrificed after 45 minutes, and tissues were harvested and flash frozen in CO:COLLECTION_SUMMARY Liquid Nitrogen. Samples were stored at -80°C until their extraction and run on CO:COLLECTION_SUMMARY the polar LC-MS method. CO:SAMPLE_TYPE Mouse Liver #TREATMENT TR:TREATMENT_SUMMARY Adeno-associated viruses (AAVs) were used for expression of RquA in mice. TR:TREATMENT_SUMMARY Briefly, rAAV was produced by transient HEK 293 cell transfection and CsCl TR:TREATMENT_SUMMARY sedimentation by the University of Massachusetts Medical School Viral Vector TR:TREATMENT_SUMMARY Core. Vector genome titers of the rAAV preparations for control virus TR:TREATMENT_SUMMARY (AAV9.Tre3G-mCherry SV40 CB6 Tet-on 3G RBG) and RquA virus (AAV9.Tre3G-RquA SV40 TR:TREATMENT_SUMMARY CB6 Tet-on 3G RBG) were determined by ddPCR, and purity was assessed by 4%–12% TR:TREATMENT_SUMMARY SDS-acrylamide gel electrophoresis and silver staining (Invitrogen). Mice were TR:TREATMENT_SUMMARY intravenously injected with 6 X 10^11 genome copies of either virus and given 1 TR:TREATMENT_SUMMARY mg/mL doxycycline in the drinking water for 7 days to induce either mCherry or TR:TREATMENT_SUMMARY RquA expression. #SAMPLEPREP SP:SAMPLEPREP_SUMMARY Tissues were flash frozen in liquid nitrogen and powderized using a mortar and SP:SAMPLEPREP_SUMMARY pestle. Approximately 10 mg of tissue powder was transferred into an Eppendorf SP:SAMPLEPREP_SUMMARY tube. The tissue powder was re-suspended in 800 µL pre-cooled HPLC-grade 60:40 SP:SAMPLEPREP_SUMMARY Methanol:Water (Sigma) and then vortexed for 15 minutes at 4°C. 500 µL of SP:SAMPLEPREP_SUMMARY pre-cooled LC-MS grade chloroform (Sigma) was added to the lysate and again SP:SAMPLEPREP_SUMMARY vortexed for 15 minutes at 4°C. Samples were then centrifuged at 16,000 x g for SP:SAMPLEPREP_SUMMARY 10 minutes at 4°C, creating three layers: the top layer containing polar SP:SAMPLEPREP_SUMMARY metabolites, the middle layer containing protein, and the bottom layer SP:SAMPLEPREP_SUMMARY containing non-polar metabolites. The top layer was transferred into a new SP:SAMPLEPREP_SUMMARY Eppendorf tube, dried down in a Refrigerated CentriVap Benchtop Vacuum SP:SAMPLEPREP_SUMMARY Concentrator connected to a CentriVap-105 Cold Trap (Labconco), and stored at SP:SAMPLEPREP_SUMMARY -80°C until they were re-suspended for LC-MS analysis. The non-polar layer was SP:SAMPLEPREP_SUMMARY discarded, and the remaining protein layer was saved for protein quantification. SP:SAMPLEPREP_SUMMARY The protein layer from the metabolite isolation was re-suspended in 1 mL of RIPA SP:SAMPLEPREP_SUMMARY buffer (150 mM NaCl, 50 mM Tris HCl pH 7.5, 0.1% SDS, 1% Triton-X 100 (Sigma), SP:SAMPLEPREP_SUMMARY 0.5% deoxycholate (Sigma), cOmplete EDTA-free protease inhibitor (Sigma)). The SP:SAMPLEPREP_SUMMARY samples were vortexed for 10 minutes at 4°C and then centrifuged at 16,000 x g SP:SAMPLEPREP_SUMMARY for 10 minutes at 4°C. Protein concentrations for each sample were calculated SP:SAMPLEPREP_SUMMARY using the Pierce BCA Protein Assay Kit (Life Technologies). The protein SP:SAMPLEPREP_SUMMARY concentrations were used to calculate the re-suspension volume to normalize all SP:SAMPLEPREP_SUMMARY samples for LC-MS analysis to equal (1 µg/µL ) concentration. #CHROMATOGRAPHY CH:CHROMATOGRAPHY_TYPE HILIC CH:INSTRUMENT_NAME Thermo Vanquish CH:COLUMN_NAME Merck SeQuant ZIC-HILIC (150 x 2.1mm,5um) CH:SOLVENT_A 100% water; 0.1% ammonium hydroxide; 20mM ammonium carbonate CH:SOLVENT_B 100% acetonitrile CH:FLOW_GRADIENT 20 min, 80% - 20% B; 0.5 min, 20% - 80% B; 7.5min, 80% B CH:FLOW_RATE 0.15ml/min CH:COLUMN_TEMPERATURE 25 #ANALYSIS AN:ANALYSIS_TYPE MS #MS MS:INSTRUMENT_NAME Thermo Q Exactive Plus Orbitrap MS:INSTRUMENT_TYPE Orbitrap MS:MS_TYPE ESI MS:ION_MODE POSITIVE MS:MS_COMMENTS The mass spectrometer was set to full scan (70-1000 m/z), with the spray voltage MS:MS_COMMENTS set to 4.0 kV, heated capillary to 350°C, and the HESI probe at 30 °C. The MS:MS_COMMENTS sheath gas flow was set at 10 units, auxiliary gas at 1 units, and sweep gas MS:MS_COMMENTS flow at 1 unit. The resolution of scan was set to 70,000, AGC target to 1x106, MS:MS_COMMENTS and maximum injection time at 20 msec. Data acquired by Thermo Fisher's Xcalibur MS:MS_COMMENTS software and analyzed by their Tracefinder software. The raw files provided MS:MS_COMMENTS contain data from both positive and negative ion mode. #MS_METABOLITE_DATA MS_METABOLITE_DATA:UNITS peak area MS_METABOLITE_DATA_START Samples Standard 2 Standard 3 Standard 4 Standard 5 Standard 6 Standard 7 Standard 8 Liver 1 Liver 2 Liver 3 Liver 4 Liver 5 Liver 6 Liver 7 Liver 8 Liver 9 Liver 10 Liver 11 Liver 12 Liver 13 Liver 15 Factors Sample source:Succinate and Fumarate Reagent Mixture | Standards for Standard Curve and Treatment:Measurable Standard Curve Sample source:Succinate and Fumarate Reagent Mixture | Standards for Standard Curve and Treatment:Measurable Standard Curve Sample source:Succinate and Fumarate Reagent Mixture | Standards for Standard Curve and Treatment:Measurable Standard Curve Sample source:Succinate and Fumarate Reagent Mixture | Standards for Standard Curve and Treatment:Measurable Standard Curve Sample source:Succinate and Fumarate Reagent Mixture | Standards for Standard Curve and Treatment:Measurable Standard Curve Sample source:Succinate and Fumarate Reagent Mixture | Standards for Standard Curve and Treatment:Measurable Standard Curve Sample source:Succinate and Fumarate Reagent Mixture | Standards for Standard Curve and Treatment:Measurable Standard Curve Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:RquA AAV injected Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:RquA AAV injected Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:RquA AAV injected Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:RquA AAV injected Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:RquA AAV injected Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:RquA AAV injected Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle Sample source:C57/BL6 mouse liver tissue | Standards for Standard Curve and Treatment:Vehicle Ciliatine 11051.43194 0 0 9724.664092 10670.39539 0 9781.925008 0 27202.39279 0 187578.293 818868.1641 0 597918.1888 2859809.336 153218.9769 48776.91288 292948.5785 188037.8957 339856.9906 38800.06084 1-Aminocyclopropanecarboxylic acid 646044.8933 1153666.022 560562.4349 0 108918.0819 56453.74518 241357.7766 130464673.5 161015343 144478095.9 68759487.66 59827623.23 118104622.1 102221415.4 155347154.3 38784103.8 35963421.48 69791614.71 49490150.55 72252372.14 40205051.64 1-Methyladenosine 0 0 0 0 0 0 0 88625134.47 39012482.63 15000085.44 9028027.435 2406027.513 65612677.24 13094359.81 1787341.872 254272.2657 2083234.77 3242927.414 361732.5706 543033.8178 442451.7941 1-Methyl nicotinamide 0 0 0 0 0 24781.65838 0 17968123.31 13331640.22 15903889.94 14626345.86 16844032.93 19392876.41 24426396.51 18109050.11 2497738.36 3547724.815 6203371.797 3510165.721 3918855.313 1976101.067 Aminoisobutyric acid 113938372.8 0 0 4288877.088 2930946.94 5774474.303 4402364.826 721099561.8 547749199.9 244932785.3 493519619.5 235020981.6 641260426.4 862047719.9 946089011.8 342360158.5 296027995.3 484813340.9 317450846.1 478681406.6 287562646.1 2-Aminophenol 0 0 265677.942 217154.2185 68893.17763 51710.28146 0 1921448.999 2265160.89 2563277.042 2706621.644 7446274.888 2178637.536 3031570.875 4725003.652 1443670.291 2102701.668 2306407.986 1580114.361 2546642.352 1776640.646 2-Hydroxypyridine 226510.598 256881.2528 0 316614.0451 0 110765.0777 161736.653 21562639.49 18892104.47 12191737.07 19183382.19 31316683.01 19462655.85 44470162.88 41914694.18 13818962.75 11913902.96 20592324.63 13034154.65 19511380.84 12464445.7 3-Hydroxyanthranilic acid 0 0 0 59634.09886 21728.87179 9996.593766 12408.91446 1721432.427 1787170.691 1970163.861 4374901.839 604969.8698 2586190.546 7133619.382 911731.6019 1348337.564 2580199.524 1370259.75 71841.18267 75146.08868 110147.4283 3-Methylhistidine 2923726.578 812612.9533 474588.6675 119870.4236 0 0 56844.40058 66969836.05 43801912.89 45857569.3 136521920 320024061.2 127901755.3 275947953.4 170557162.2 135215731.1 202146401.1 190226153.4 167625832 176118486.9 170557248.5 Nitrotyrosine 0 0 0 0 0 0 0 448322.4007 177976.1997 534016.1744 199019.8096 725863.4152 517564.9504 3840242.88 3604160.619 672428.869 641395.257 1372590.337 681418.9669 1472705.76 646433.8613 4-Guanidinobutanoic acid 3581979.213 2315336.162 2243459.182 5032507.272 1928660.047 1905355.557 4829938.969 1370948956 693499967.3 691176629.3 4017383150 1201570761 2076183762 3091714340 2703692839 1578940721 893440543.5 2703764029 1059874258 2447304627 817923901.5 5-Amino-levulinic acid 987232.3142 199154.2033 0 0 168809.6982 0 465280.1338 90826122.22 63765787.14 18200960.6 358247101.4 102144650.9 60856547.73 252119341.9 413981038.6 261361399.3 191754010.9 249229325.6 183610872.8 280926356.9 164085233.2 5-Aminopentanoic acid 240670.9102 296983.9515 230421.9219 295625.4811 0 589286.6254 120687.3758 67226708.77 46331812.53 28253243.95 231241420.7 34432423.69 70424398.88 58903085.82 49016189.47 23907010.59 17049387.87 22055452.2 17368036.21 28416060.35 12831723.93 5-Methylcytosine 0 290619.4945 76191.7815 327280.1936 35187.5901 186867.634 78217.871 12891645.14 10039138.67 4777203.253 9077296.849 13060748.91 7886601.476 29262883.1 33692751.54 5158580.277 4602661.912 11969482.95 5740319.594 8913551.213 4531875.265 Acetylcholine 76821.14049 0 0 0 0 0 0 79664526.91 69690007.28 63900534.97 187556888.4 47110712.18 147450401.2 174817672.4 144243450.9 26775544.94 37304559.57 48868498.16 29197694.51 45600355.83 23236833.38 Adenine 42606328.92 23447273 10871271.84 5583411.442 6269368.715 4953405.217 661176.3521 1364276324 765625755.1 1134861728 1275686830 1665339047 1069697209 4387203437 3905178708 808792242.9 819784104.3 1666762428 1418063640 1061035821 547334298.2 Allothreonine 3715012.898 3311323.432 1675551.135 948281.8234 0 777707.9781 829976.8639 977798389.4 1144486373 1018726198 514894436.7 426131097.6 906552818.6 614081258.9 995107570.8 274521322 238814456.2 461738033.9 363372944.6 552742492.9 295500699.1 alpha-Aminoadipic acid 350366.8331 44350.6019 213452.6622 167671.8448 120218.9629 194559.3686 128695.6382 8582947278 5424830514 2756523911 6678039636 460685956.8 8397629964 436564160.8 313899983 226467753.4 160023841.9 103064075.5 241762384.4 222979968.2 240844488.7 3-Aminoisobutanoic acid 0 0 0 4191847.051 3626721.19 6015251.719 5366620.981 924713429.2 688162805.1 399884711.7 774905959.8 429853536.8 812649676.5 969328337.2 1051179606 402123908.7 360210393.6 552148808.5 383358851.6 563468479.8 321575504.8 Anserine 25277.11792 0 0 0 0 0 24660.84 8390346.524 11306322.44 9284732.693 4297505.108 6998066.062 20433048.77 12692239.89 8122612.011 9542419.993 8660714.202 13168520.18 10461073.21 13974490.13 9593287.425 Arginine 8166098095 5021941933 2770062878 1419656846 209978379.4 103113861.6 57157875.16 1204953585 768183364.2 740578701.8 526973080.9 200088433.3 1882754392 671915569.2 409679480.8 68229518.84 149616025 308311136.4 59178623.48 106603812.1 109349966.5 Asparagine 323552.6379 237833.9586 157663.5734 217132.4563 0 87958.05794 159779.5765 80505074.93 75300350.85 35057488.09 51110287.31 71068297.8 78366749.06 59934369.3 51345817.12 68550297.98 63277767.42 86412333.35 103779013 63262205.15 85455152.7 Asparagine_15N1 55084.55101 12280.71789 44162.28617 110036.5411 25598.36001 0 52928.66928 37469613.31 34150840.82 19172063.57 21145436.84 27949726.21 31000303.06 23220946.77 3767923.079 17492820.98 27947888.51 40363708.36 45832683.68 11873376.5 30024176.31 beta-Alanine 2715457.225 1291594.37 1025567.227 886680.715 855807.7506 1034719.112 907904.7666 1117263631 1050230235 1046958598 1308788990 863113594.9 1247954110 1517565172 1336512943 720251715 729654903.7 614222748.7 786163226.6 1118932766 1010036876 Betaine 1157142593 604229332.6 289783235.5 129958787.6 32292865.14 36156111.18 33504466.23 97312858398 59359110083 36047499314 90260243156 53708417374 76254472679 1.09393E+11 88419273186 32172839611 58035128998 59545405679 46066825030 45602420636 26884140255 NAD+ 277884.9755 46075.94026 0 0 0 0 0 173337486.3 103791347.1 35393041.88 200227421.5 459997485.1 107124377 858232829.6 770206576.4 366918562.4 435705368 537490446.6 475676280.8 513169794.6 456959023 Caffeine 145685.3678 92626.69224 304839.0072 0 262989.256 136928.451 94477.35441 1342473.46 746331.0169 2964042.362 642106.7448 2041971.387 819992.9076 2455224.178 6692724.217 1025227.743 743271.7873 2673074.571 1403141.998 1784682.955 938667.8167 Carnosine 0 0 0 0 0 0 0 2290944.787 3957827.346 6167263.169 1594434.105 2001100.282 4945643.449 3580007.473 2742781.755 2364043.283 2337796.489 3544931.743 2508041.552 3209365.025 1825505.288 Choline 3181046.465 924692.2017 707181.2389 502418.6963 524221.4618 498447.3916 503527.3699 401653229.8 589388880.2 858400533.7 432146210.8 224691469.9 881117712.3 512801948.4 1505105221 295548689.6 91617218.48 651607406.4 421168538.5 661831649.9 264648606.9 cis-4-Hydroxy-D-proline 987232.3142 198529.5643 34517.01082 772669.565 231343.8337 0 0 90826122.22 63765787.14 18200960.6 358251525.6 102162359.3 60856547.73 252119341.9 413976952 261361399.3 191754010.9 249229325.6 183610872.8 280999428.4 164085233.2 Citrulline 1182349.766 947306.6562 0 684958.346 317276.8666 798599.9902 693990.4221 947211830.9 1826490359 2285949978 395596581.8 448009067.2 671150001.7 395905917.9 244876657.7 159919793.5 129185238.9 191254958.6 157847618.6 267055648.3 187899620.6 Coenzyme A 0 0 0 0 0 0 0 919962.9395 0 0 318465.326 4139163.873 251540.1147 39113204.37 19014060.65 1255772.538 1496527.509 4105191.432 2184965.232 3590297.787 1455596.45 Creatine 148687221.2 26533009.44 49414895.91 37251727.6 61658566.27 103196740.2 54646716.62 24211794242 25720263639 27102517660 19441359925 16471644046 31340300542 31080125174 16149345084 9057664118 13134412098 17241043572 9893090640 11299476843 10198526056 Creatinine 38274050.15 7609462.381 5985785.488 4214688.159 3643196.811 4061908.187 3609540.301 878279832.7 650569026.4 806916276.5 827926836.6 654258324.2 844462732.7 1744871967 2264811750 441411846 430253462.5 1138994537 526638696.3 835516042.2 420509662.1 Cystathionine 9283.034456 0 9936.736011 23292.44407 0 0 9419.625218 59180015.24 50544295.94 65069091.63 54198920.35 12275286.83 68603398.15 5008806.286 9110534.45 7257125.963 2262540.732 5333537.502 10568469.59 20533038.6 10087344.04 Cysteic acid 0 0 0 0 0 10997.79947 0 2323366.381 1430582.711 696949.421 1012197.446 640818.5421 988996.1558 3313971.297 5075529.723 265038.4556 308660.5396 1250142.982 313936.4303 1061072.844 420293.5986 Cystine 0 0 0 0 0 0 0 21434545.52 21459454.43 18086046.72 5033559.42 488885.8566 42996513.5 1491760.679 1555639.413 398080.3407 399875.331 1898386.562 742546.5483 1392811.136 811930.2158 Cytidine 0 470323.958 0 880373.4769 1377563.652 929705.6381 515438.6033 218578766 182821620.7 367395885.1 145490259.3 80362788.03 346129439 318000606.7 277391206.6 63033456.07 117985251.4 135708722.4 57078696.11 95736332.34 56734869.91 D-Alanine 2715457.225 1221321.621 1025567.227 968474.9576 845565.6579 1034719.112 847853.3682 1117263631 1050230235 1046958598 1308788990 863113594.9 1247954110 1517565172 1336512943 720251715 729654903.7 614222748.7 786163226.6 1118932766 1010036876 D-Alanine_13C1 0 0 164151.7386 149511.2419 136587.4063 0 188733.9003 83482876.94 70360896.07 50202820.19 88184143.11 69262177 85998909.69 88478487.03 57264183.25 34954442.51 41836961.11 36476254.01 46995014.05 46250521.87 62168608.92 D-Alanine_13C2 0 10886.39436 0 0 11313.83141 0 0 46798211.8 44526959.41 29536586.4 40863873.81 33197715.32 54931429.29 20909620.6 5184250.808 7931727.812 14305649.32 9793795.662 16067804.34 10389078.4 21819504.29 D-Alanine_13C3 0 0 0 0 0 0 0 106462882.3 87922154.69 48107116.7 68012746.55 48595131.61 80491998.65 36464126.04 348789.0944 8920622.855 23409544.9 11827144.38 23008225.96 7344607.205 25602646.73 D-Alanine_15N1 0 0 0 175149.7592 256154.179 32000.63992 78808.59051 404972833.6 348382595.9 345089987 379273846.6 227700840.8 357111073.8 360393465.3 71956896.37 133938575.8 254090272.8 173835725.8 242726983.2 126994486.3 286107122.9 3-Dehydroxycarnitine 2678396.865 625780.3072 463362.3053 451954.1621 333210.2962 510564.617 422688.0716 1052476545 963116887.9 835805188.4 2472087742 642904954 2013515912 2529625986 1939759938 366993447.5 526658161 642232154.6 381932210.4 626304574.3 329142471.7 Dethiobiotin 382453.5302 74110.92919 31540.31612 85030.81812 82458.357 82227.36133 40784.31728 21722927.74 16655856.69 11762686.78 8372178.328 15270874.14 32751602.95 32176786.91 22047501.92 4865634.391 5663472.741 9094044.96 5252771.472 7206943.954 4906601.503 Diethanolamine 6019818.662 4578297.583 2739641.831 2536239.324 28246204.35 13087365.92 0 37950713.52 29398288.76 56009352 69212838.81 228769832.8 70248253.12 52636474.02 55481761.37 24393194.77 38210790.49 24552438.02 21014388.54 26033452.51 32240561.79 2-Amino-2-deoxy-D-mannose 0 0 0 0 19859.84139 0 113603.2744 7703582.81 4600777.394 1854919.658 6570753.866 18083507.67 5092050.848 58193443.52 52915250.37 17916933.49 21443727.24 27059563.97 25758773.73 31732073.71 23617624.79 D-Ornithine 1867536.692 1950273.923 2512058.879 3608446.325 796664.7927 859082.5488 870435.5374 2294659072 2024330669 1402673279 1946519646 759177398.7 2095061296 951389809.8 677380159.1 529663920.4 470506522.1 500177448.7 499516522.9 745234880.3 494868369.6 Ethyl 3-indoleacetate 162591.2987 189713.1094 17104.88771 11044.86584 154784.7349 95459.59066 128529.4367 5986975.068 11526885.14 9848942.627 15020790.8 5067606.82 5242953.964 0 701814.8561 3655865.454 7984336.553 1704780.372 3948798.678 5985532.578 4209466.161 FAD 0 0 0 0 0 0 0 13608951.14 21597601.61 1038570.249 17599709.8 45699838.06 17641787.66 82958499.99 21061223.11 30828733.06 32890370.83 22340999.08 39048608.66 39903666.33 32151264.53 Glucosamine 0 0 0 0 19859.84139 101792.2275 111943.1755 7703582.81 4600777.394 1854919.658 6570753.866 18083507.67 5092050.848 58193443.52 52831861.22 18023675.13 21443727.24 27059563.97 25758773.73 31732073.71 23617624.79 Glutamine_13C1 257354.0765 22222.23958 59004.80537 174961.6141 177768.3909 327040.9348 137022.5791 341147351.8 323281396.4 252586937.7 225302803.1 283094149.4 316320971.7 363391840.8 688949602.5 297497583.7 179664193.1 268277226.3 349524742 457888650.7 292041386.6 Glutamine_13C2 15141.3651 0 21145.58161 12520.56339 12836.53061 24764.76342 34424.30615 100007885.5 90814165 37025238.56 63725794.03 94795235.42 97064417 111639928.6 127158438.2 101310289.9 59176150.54 93138690.68 127323279 116648210.5 96157755.7 Glutamine_13C3 23621.5434 108265.2524 109155.5777 78584.08207 79710.73563 138508.6267 160263.7667 82524812.66 71867252.75 23034201.31 44262578.96 79670863.67 65448284.96 78036368.29 64295058.88 70658414.03 47707768.68 72624922.02 102743701.3 75051380.91 87378868.01 Glutamine_13C4 390541.8204 179783.2034 0 0 73072.22088 0 0 13175818.93 12535680.33 5116155.347 5219725.789 12880478.78 9958972.095 11916603.36 9276376.372 12870965.73 8672632.126 12212861.83 19861759.31 11451428.78 16026721.79 Glutamine_13C5 42821.70213 50769.5278 81128.08976 50541.99593 278005.5592 263902.423 44670.04201 249745426.1 194859141.9 111312107 104206062.5 237838616.3 157878591.2 240648817.5 242050193.1 218715498.2 161192351.6 240839814.1 383718703.8 248880123.1 319845108.6 Glutamine_13C5_15N2 3226016.655 915607.1799 1908013.745 42333058.58 2305718.508 2419937.575 1195250.491 4831717415 5219623508 7614313092 2262684046 1889201308 2450137707 1158084215 792586377.3 726793580.7 1058153448 2858091048 1670923275 600624743 1259804808 Glutamine_15N1 52914.10905 28757.17407 0 25443.31372 37937.90829 87458.91897 69927.9327 1908355663 1638474879 936511032.5 1034033339 1295922645 1609394351 1559351550 1650760119 1092570068 1070966497 1639546337 1887233853 1368779992 1672928346 Glutamine_15N2 32221.02866 11549.73076 44077.84512 10930.43442 8933.091032 9206.807063 22163.42292 312553087.5 265644880.2 94862745.6 178927069.2 203963028.6 303891930.8 187722449.7 77142744.15 126628224.9 205889708.5 340851289.4 364574628.3 99612975.96 282598102.8 CAR DC5:0 45464.53429 44742.65374 34409.47561 36752.49863 14062.48677 59530.49782 63984.68777 504658405.9 338698455.2 44781587.51 1153717317 837645817.7 376859101.1 2296808823 1152947533 162822482.7 365383831.6 333467572.5 234709829 306629255.4 229935395 Glutathione 741630.2461 489534.0044 395112.1328 277826.7152 74546.1334 245116.5559 114432.3139 1882649.785 2148473.952 420889.8665 5452265.451 811011.4548 1881140.633 0 8970034.393 6429510.823 310832216.8 7191074.782 358172.9772 615447.701 8362938.57 Glycine 75419561.14 39236120.42 19507988.59 8371694.8 1357990.104 2573744.486 583186.6824 137664048.4 120895101.2 111107155.4 93223790.3 67148670.56 139615556 213561118.7 314754244 122571950.5 71039940.9 173559561.2 117011225.3 191673431.1 103192631.6 Glycine_13C1 1610101.94 845143.6608 413859.3186 119365.2141 0 0 9743.5814 3150731.662 2297590.335 2738365.373 2199904.354 1293195.821 2707606.59 4985027.454 6477895.001 3565449.552 1792103.047 4723777.797 2885860.879 4539357.595 2630265.952 Glyoxylic acid 50028.89954 45624.16804 113589.7659 49675.25197 9938.741911 42484.76928 56275.88394 1648006.47 1375606.528 715503.8247 1595200.962 2614521.721 1765920.838 9958183.364 7577863.659 2234058.578 2137733.522 3854078.052 3298868.793 4528552.555 2862272.518 Oxidized glutathione 0 0 0 0 0 0 0 688835966.8 463239374.8 448567243.4 925709024.2 879609755.5 494889645.8 2092210069 2416366214 603678330.2 473043824.5 958057062.6 728234643.2 941727141 588560410.5 Guanidinosuccinic acid 0 0 0 0 0 0 0 364292.5081 198590.3398 246725.0677 922312.513 5475565.802 149750.2724 2026841.54 10767605.48 2473103.282 331033.4371 4236933.67 2024241.058 5125783.245 6057348.444 Gulose 192983.6416 28309.04825 110957.231 115973.8339 75842.62006 104257.9937 187092.0435 63891299.93 37296897.59 22342201.38 59642803.61 122921462.5 61894111.2 653556700.5 505532983.4 118131841.7 123261778.6 218099055.9 181088341.3 230045987.1 171860701.1 Homocysteine 0 0 0 0 7747.224169 0 0 8100853.636 7610999.96 5410988.931 5108937.475 1577158.582 8329585.312 5361130.956 0 222906.7526 2147244.619 1443871.913 827369.8693 121033.592 1019376.121 Homoserine 3715012.898 3308982.089 1526036.344 963486.8492 724152.7533 783632.0425 806094.7905 977730869.9 1144486373 1018726198 512324848.5 426279708.5 906552776.5 614706440.5 995142661.5 274366535.9 238814444.7 461591759.2 362324761.3 541857309.3 295500699.1 Hypotaurine 0 0 0 0 0 0 0 80247693.51 50064253.56 43236027.56 35684393.21 14418088.77 49453303.54 5328105.998 0 134062273.9 55362620.95 12604746.18 66414357.95 53614206.02 90697964.02 Hypoxanthine 1174279.59 913545.0465 533199.1126 459357.0607 241145.5136 290010.3883 298703.6792 522384470.6 837437782.7 385966815.6 564265593.1 839294381.2 977376176.3 881971638.3 652511986.8 179432161.6 276267473.2 182461056.5 165530601.8 529333373.7 100555150.1 Indole-3-methyl acetate 85727.40713 18338.06331 34672.34019 0 0 0 39225.75907 93373.48946 0 1754758.009 3590530.006 3469783.886 1537528.706 627041.8366 1529510.155 889795.5032 1832326.321 1118640.802 624527.2961 639287.2036 1013092.725 Inosine 183857.7448 125223.2403 151243.4303 203126.7551 111516.1333 219309.7817 67602.36642 1098438345 1151198025 2281802653 1434100063 514854978 1670250701 2093436227 2364965427 612666926.6 997781018.3 883308881.9 231301112.3 985477023.2 966339581.7 Kynurenine 0 0 0 0 0 0 0 24125508.98 22853879.72 15408863.32 18130321.89 6004757.728 26415401.39 22536672.19 18044335.14 3438849.657 4017827.157 5684036.86 3147879.603 9370399.485 4859958.409 Alanine 4345236.001 2428377.475 1800045.591 1891064.191 1384982.817 1500292.546 997620.5206 1127973287 1055727319 1156332143 1316253812 982004212.8 1253692621 1768364648 1508170027 722892079.3 731974162 679868120.1 872650802 1123818717 1114797037 Alanine_13C1 1784654.053 1759923.101 2010200.391 1556141.156 1403989.709 980155.9214 1617681.377 83574520.5 70478524.99 50331417.17 88360767.4 69284788.31 86187012.98 98838479.22 57264183.25 35172643.4 41885615.93 36476254.01 47046729.5 46347318.54 62256461.35 Alanine_13C2 168463.2897 106401.4466 208400.8181 102727.4894 103756.3332 70718.37472 82283.58666 46798211.8 44526959.41 29549705.41 40863873.81 33197715.32 54931429.29 20909620.6 5184250.808 7931727.812 14305649.32 9793795.662 16067804.34 10389078.4 21819504.29 Alanine_13C3 11767.25736 8721.158554 0 8561.105372 8706.965484 9128.670938 0 106462882.3 87922154.69 48107116.7 68012746.55 48595131.61 80491998.65 36464126.04 348789.0944 8920622.855 23409544.9 11827144.38 23008225.96 7344607.205 25602646.73 CAR 12:0 0 0 0 0 0 0 0 6929698.47 3074435.17 3395218.528 3111439.716 4520160.589 4921923.006 91994.8096 471240.3915 0 491460.4248 701206.5252 125936.879 348602.6867 183936.6423 Carnitine 25926780.45 4033089.526 6796833.568 5219733.286 8475929.883 13505088.52 7598545.135 26454952799 25649640685 8776827061 25657822849 37510462182 25953958975 84911426233 42683702066 10725933694 16633589827 20582202519 12290905919 15525435208 11734021312 Leucine 2694126037 1398909361 631130081.4 230673138.2 27490347.51 12790217.67 7407309.137 3197115803 2889774005 2381152014 1898332067 1508683775 4081078018 5220693968 5081289542 1168213796 1486609224 2004003453 1806802208 2661390367 1707205746 Leucine_15N1 8386507.448 5575240.302 2298736.011 826216.2194 166624.6129 0 0 94404858.91 116770592.1 97581814.74 54245202.7 53527396.47 85158650.38 96943085.63 34232499.76 28306022.35 32776524.77 31980949.3 41049646.28 32393928.79 41299702.1 Ornithine 1867536.692 1950273.923 2512058.879 3608446.325 796664.7927 846578.0408 892383.8934 2291049211 2024330132 1399736513 1946519646 759177398.7 2088967555 950411883.8 676241293.7 528519659.8 468934090.2 500035761.9 498060900.4 745234880.3 494868369.6 Lumichrome 10018.24245 0 0 0 0 0 0 43922592.1 15182489.02 14965459.33 19059918.53 36998700.77 20487736.04 224622306.7 143752351 5820164.099 12756970.71 61280214.68 8931889.915 23327540.63 11008713.56 Lysine 4500974.565 2296212.393 1571610.79 957232.2778 441648.6233 658697.7646 606859.9313 5026132510 4201317270 2604594418 1796615363 896767851.2 3203839171 1994451765 1812714932 547236325.5 550599090 866290632.3 603006016 1156102968 755840508.2 Methionine 44023.62514 24602.23137 57996.04123 0 53545.02804 0 9725.421354 600333162.4 1212518428 1101782506 187616822.7 131785427.3 659308500.7 90401087.73 88375265.71 208907865.4 138316141.2 224201154.8 253967448.9 272176724.7 260131945.1 5'-Methylthioadenosine 0 0 0 0 0 0 0 249980764.9 128004391 92269833.63 180502440 264341835.2 164185752.7 1001510713 586248358.4 87411489.52 143506069.9 303733661.5 147756460 129570833.9 107762225.8 N-6-Trimethyllysine 220681.818 68275.99301 0 24544.74364 23369.71838 133458.849 23524.83597 289379200.3 366920022.5 221463618.1 246685309.5 192698064.2 287128306.4 248333918.4 246413991.1 69465352.55 118477776.1 123962098.6 66038306.34 101568184.1 93964569.76 Dimethylarginine 41233.78066 12277.73221 0 28404.50022 0 14019.53589 0 252879092.5 194373974.3 141757002.5 270271948.9 170587192.7 214023075.3 170617703.2 124622046.1 51874412.8 79746348.92 75798001.22 61739249.79 89197850.93 57079861.86 N-Acetylasparagine 11318.03604 0 25877.29487 0 0 0 0 39195903.84 31085649.06 23582490.19 15987476.81 32272491.61 14918145.4 55648306.85 97449997.54 33430893.28 14504945.04 33104993.33 29145800.95 53670984.27 27810435.47 N-Acetyl-D-galactosamine 6781106.346 2693262.17 1457318.431 681389.2024 24738.60077 22605.30522 0 46046923.62 36302889.88 30192155.73 22460785.19 8453017.886 49451614.62 40009297.15 44841723.86 5363712.489 7689464.348 11819562.44 6246106.813 11431420.43 6121344.243 N-Acetyl-D-glucosamine 6781106.346 2693262.17 1457318.431 681389.2024 24738.60077 22605.30522 0 46046923.62 36302889.88 30192155.73 22460785.19 0 49451614.62 40009297.15 44841723.86 5363712.489 7689529.3 11502426.43 6242824.113 11201041.17 6121344.243 N-Acetyl-mannosamine 6781106.346 2693262.17 1457318.431 681389.2024 24738.60077 22605.30522 0 46046923.62 36302889.88 30182258.44 22460785.19 8054703.398 49451614.62 40009297.15 44841723.86 5363712.489 7689529.3 11644884.23 6242824.113 11265541.45 6121344.243 NADP+ 0 0 0 0 0 0 0 9376744.483 5172694.766 47803.55358 5243438.267 72163998.12 3623400.782 57617780.13 39331181.38 23276770.4 24653224.09 45627693.53 44639189.83 35541392.75 28669160.8 N(2)-Acetyllysine 246239.9815 0 155442.3814 104475.7203 234631.1094 52149.46856 0 169299295.4 187738699.8 132668341.2 86600230.19 74045205.06 76673833.3 262478755.8 235111104 108337232.4 86099288.09 144502623.3 102538697.5 136336398.2 85244936.26 N-ETHYL-5-METHYL-2-(1-METHYLETHYL)-CYCLOHEXANECARBOXAMIDE 23664.92331 38505.75254 40277.94997 0 0 59292.4087 12811.15666 490720.8361 130913.4799 160744.5731 1575850.614 3219193.281 462647.8041 376495.3128 938715.3381 525723.4853 1197265.211 561382.9819 382478.3843 477917.53 540096.1327 N-Formylglycine 10842.74011 41714.48453 48689.03164 0 107890.6289 54884.86436 0 6232223.024 4258554.917 2273955.216 6072689.103 3585849.832 3072691.594 9426003.969 7473946.287 2208769.367 1914607.697 3741448.533 3316862.048 3494378.131 1994971.838 Niacinamide 16021288.05 8546419.898 5545531.477 3743243.834 2060444.056 414910.9213 1070706.631 17005389309 14701288914 7896402665 12522682321 19769081081 14338188655 33676570029 31867207197 9384857317 8992051223 16406063539 9856767012 14328279772 9681309438 Nicotinamide ribotide 0 0 0 0 0 0 0 9507010.394 2947698.848 2072885.847 7676590.089 13159958.54 3133844.05 97799837.67 88756093.66 5038220.21 11000766.89 30600979.46 7091707.904 12099494.68 10246337.16 Nicotinic acid 391441.0066 65346.745 127501.1139 146473.321 0 142998.5632 0 56119839.93 6849570.352 6900846.492 15116930.88 16803744.14 4371587.92 10121713.78 25136506.8 9719800.174 13904499.18 8270066.89 25113848.42 15217731.33 36128444.07 N-METHYL-ALANINE 0 0 0 0 0 0 5317027.259 948560198.4 738455236.4 244422660.2 499677174 234238141.6 810169503.4 966607497.8 1049761573 414711949.4 379094708.4 561652225.4 385962412.8 557929588.9 359910867 Norleucine 2694126037 1398909361 631132089.5 230782124.8 27857334.42 12897482.28 7409403.643 3197115803 2889774005 2381152014 1898332067 1508683775 4081078018 5220693968 5081289542 1168213796 1486609224 2004003453 1806802208 2661390367 1707205746 Norvaline 1157142593 604225273.7 289786183.5 129953749.4 30552067.58 34290156.24 33483767.48 97312858398 59359110083 36047499314 90260243156 53708417374 76254472679 1.09393E+11 88419273186 32172839611 58035128998 59545405679 46066825030 45602420636 26884140255 CAR 2:0 15819715.54 1281054.437 2612055.492 2121132.03 2615244.164 3878304.256 2233287.562 13340523368 11247635319 4533443794 13397814310 19840095345 14123597077 44030199591 25105592587 6597154553 12066693347 15473591130 8569381968 11165088722 8577756980 Phosphoethanolamine 15000.36621 0 0 0 0 0 0 543382363.3 580384272.5 212537796.4 315866548.1 161313103.4 487319922.3 313136036.8 251246765.3 51535007.16 71966188.42 121519270.6 61960285.35 88282996.23 51586180.57 Ophthalmic acid 0 0 0 0 0 0 0 470900044.8 343002270.6 131125430.5 253514313.1 132555319.5 362573814 445530905.3 524821636.8 100884520.3 102753102.5 82660668.5 78244176.8 84206454.37 64013318.85 o-Succinylhomoserine Pantothenic acid 2591125.312 970873.1673 1098795.612 775992.9859 913745.2766 1075121.94 860513.9024 455840557.1 439317403.8 537043219.9 277831185.4 343710684.2 390678926.2 1564435629 840242497.4 140948822.5 256810520.1 327331776.2 162078011.2 206533491.2 147470832.3 Phenylalanine 6372480.686 3999699.798 2007119.715 1309018.52 560355.5691 439905.8607 694966.1719 3105521168 2283857620 4358332991 1695593673 1096536185 3448623721 4790254385 3406240554 539680002.1 782560181.6 1315909493 870083828.1 1345222234 888809110.1 Choline phosphate 9439424.044 1064247.944 1288437.459 1231007.359 1651740.473 2016866.983 1077709.333 4800408507 5258729950 1276793761 5769057551 7243775883 7275927447 10704067160 16337459162 5792034877 1733874165 8839936461 5769948722 6153731374 3432473633 Octopamine 3425087.597 1126961.43 2129058.679 41992944.23 2273724.893 2721646.553 1525585.263 4840444313 5226278298 7785168813 2257050522 1883231173 2454703069 1162635950 796004400.6 722741887.5 1051149395 2852597897 1662843748 598610047 1245515394 Proline 11282641533 6465763308 3325791336 1274659527 152724373.5 67144557.55 40271993.52 10965031876 9959739733 9010053811 9597406403 4922277458 11265130202 13392809895 11854273323 3334970023 3810980992 5253107447 5166507093 8075713222 4821826179 Pterin 0 0 0 0 0 0 0 966124.9197 5371836.124 0 0 18854391.95 0 13443826.12 23239246.05 9247846.565 12112607.87 32640083.92 16399195.9 15367874.44 12703715.23 Pyridoxal 367921.8375 110174.0744 795603.0633 91412.90749 79511.37205 200437.6451 48944.32847 271266169.1 205161807.6 361041254.8 446870810.3 156884107.8 444292727.2 1066174798 544954599.5 224170904 408769851 207174026.8 101050260.3 223809575 181226871.2 Pyridoxamine 468628.8112 436377.5349 192491.3011 0 0 0 111421.3925 23304741.29 15477471.39 59686148.88 58729355.73 12742810.68 34512984.83 18713999.22 11303891.54 11289016.79 29210341.25 6623132.347 7748763.863 10342268.95 12712713.18 Pyridoxine 0 734364.5803 604684.058 425290.0051 441276.3358 334520.0925 295866.4657 3578989.414 7988225.435 3415185.15 4655594.371 2952905.861 4639763.618 5874700.712 8046348.449 5246154.481 3602312.515 4839072.788 4824650.851 5997569.588 3526035.403 Riboflavin 0 0 0 0 0 0 0 31410233.78 10813566.08 54859599.74 33193810.01 3560292.449 22380559.72 60633989.9 55872057.06 2890268.58 9058268.44 11939136.46 1962187.679 6636626.32 3709439.459 S-Adenosylhomocysteine 12862.11243 0 0 0 0 0 0 429581768.2 412355665 183998802.1 504687018.9 450592596.9 336054699 716181988 800868968.7 449399089.9 472775828.4 395759638.4 511478668.5 794370150.2 362283247 S-Adenosylmethionine 13081.00159 0 0 0 0 0 0 162744254.1 125270736.6 103320084.7 146145456 138051166.1 159639932.1 307049465.7 206985636.9 97994959.52 110785645.8 138055426.6 125115687.2 95643336.81 111375629.9 Sarcosine 3227066.988 1417116.911 1102998.076 1924304.263 905779.1565 1386116.725 944008.6941 1162018286 1083659380 1195562846 1359430585 1008017644 1298587731 1870684111 1560646446 743082297.8 747143091.4 697560101.8 890025970.6 1152039321 1132736753 Serine 221650072.5 106804821.9 54275914.69 26002173.22 2474251.722 1436052.465 1104740.623 102543796.7 116213113.4 132222232.3 79196208.83 64951836.54 148896732.4 110054836.9 181933535.4 53397446.68 37707369.86 86261517.37 62694357.94 96568648.81 56575805.96 Taurine 3753564.792 1167583.311 2593221.989 1342538.485 1936032.308 3448185.652 1521408.844 4793248468 3873020252 3349332722 5440274425 10183332950 4907139242 21487639026 16663670766 6639845685 7045283273 10829554193 7254806108 9476420885 7087942540 trans-4-Hydroxyproline 987232.3142 198529.5643 34517.01082 772669.565 231343.8337 0 0 90826122.22 63765787.14 18200960.6 358251525.6 88507258.46 60856547.73 228354129.4 413976952 261361399.3 191754010.9 249229325.6 183610872.8 280999428.4 164085233.2 Trigonelline 1508541.961 785502.6769 461682.6579 540065.1142 235521.8785 445170.7828 406591.9676 777371998.2 339403104.3 185424106.9 1701157820 3896108960 624665245.9 9514999962 11091071141 3299345635 1873681626 6667662927 3241640521 5010003913 1857632088 Tryptamine 93008.07796 33426.26289 60959.00828 69687.68828 0 33498.17754 124701.5058 248964.1513 308644.5576 52615.14483 2029933.643 625486.0908 811665.8259 1527669.232 690584.6608 670869.3801 562112.7791 411520.4746 603454.725 672823.3644 522477.4222 Tryptophan 69934.80939 65521.18859 133210.7338 40180.67545 10449.55997 12110.70505 12322.17521 77580073.7 145346752.4 114775538.2 98537150.24 29979268.86 302794725.9 7577179.565 834733.5685 73805344.68 90188083.94 1218733.279 91939074.41 60594072.05 87282960.24 Tyramine 167039.8724 70458.87787 54388.59192 38284.57282 271207.437 21746.50161 82562.44377 504645.7554 519775.0957 497668.6719 1059813.427 596649.6741 467566.446 316589.719 528260.8391 350709.4334 544398.1988 411646.0678 343756.3052 500004.7526 319794.7523 Tyrosine 264682.9568 136168.433 405492.5729 750594.9028 194346.7372 281438.7569 366891.268 1300404119 1577564758 2127451788 628647687.3 320427218.6 1250824455 839783479.9 526119959 165407569.3 245355095.2 293863166.8 223717949.7 343774140.6 188794474 UDP-N-acetylgalactosamine 0 0 0 0 0 0 0 40742695.36 25683452.21 29200313.33 36129988.17 45544548.04 40992867.53 150458386.4 146470663.2 26560087.31 32057561.65 43441004.94 33464561.49 48946165.38 28637000.92 Valine 1156975910 604217890.2 289822697.4 129895967.1 33456324.78 34245332.41 33483767.48 97312858398 59359110083 36047499314 90260243156 53708417374 76254472679 1.09393E+11 88419273186 32172839611 58035128998 59545405679 46066825030 45602420636 26884140255 Xanthine 0 0 0 0 0 0 0 20405837.68 9085560.686 6791820.384 20522647.75 6134308.644 28048830.23 73802581.07 67799715.83 3691056.942 7983769.916 14511501.28 3362289.989 13898119.08 2904724.576 XMP 0 0 0 0 0 0 0 5829406.843 1494320.384 0 1560330.739 60072.67543 3877124.779 13051685.7 8285497.425 187991.7765 1533710.252 4811013.662 251602.3206 1298636.476 171848.6971 Xylose 445617.5206 194487.1369 473887.837 320280.1758 370551.8849 97868.12311 76703.88105 3625597.916 3126393.583 3389269.576 6067020.805 3969839.632 2879348.184 17150822.54 13476567.83 4507801.368 4091408.834 9167023.697 5434335.787 6414018.875 4318557.8 Adonitol 48997.07996 76069.80304 17011.85558 72189.94106 58809.08286 24679.20839 49287.70523 892411637.9 655635449.4 362180577 171564008.8 48585290.08 314013052.7 130834180.3 26108010.12 27888918.11 65090055.13 48095702.77 49897616.91 19410612.99 27597190.02 Ribose 5-phosphate_13C1 0 0 0 0 0 0 0 6023444.565 3672025.832 494082.2878 2744322.422 9156713.304 6192068.91 12135556.33 9833930.832 2722274.877 2220827.527 5517954.806 2980006.175 3975305.222 2760116.039 Ribose 5-phosphate_13C2 236004.1589 57670.0095 784.5369307 0 0 0 0 1908732.9 882601.8133 87446.27878 486608.5498 1695260.336 1264817.591 2471405.103 2350155.379 512431.0487 391837.1013 1253162.209 560585.8907 744607.1703 482651.4111 Methylmalonic acid_13C1 14185366.71 6657027.534 2912891.212 1083032.94 96822.97577 33114.63614 12321.39779 52805770.25 52663388.13 22624130.68 67379711.59 76430703.76 35973810.54 197838929.1 61169233.7 30078404.3 52140182.97 53386050.31 41224486.33 37864078.56 31979125.16 Methylmalonic acid_13C2 2622626.178 1208798.779 469068.8922 0 0 0 0 59276075.99 58695304.91 27560024.62 42451620.34 35107337.44 28384035.1 72786859.11 15168474.83 11388497.22 23449298.93 24342875.58 18288223.97 11658412.35 14227499.24 Methylmalonic acid_13C3 20381.63653 22597.8821 4696.84661 0 0 3715.527674 0 33195607.68 31671196.97 15491428.18 22990894.07 18725877.47 11679826.02 54703488.36 4581995.817 7128356.154 19067007.63 13267371.93 12554041.71 6912906.606 10132728.52 Serine_13C1 7357278.431 3549214.705 1766617.101 811124.6126 0 0 0 3387653.665 4094223.426 4602041.668 1867320.097 1822430.271 4931188.394 2551828.137 4574412.179 1738495.14 870040.8525 2983668.368 2017822.149 3329149.023 1501122.832 UDP-glucose_13C1 0 0 0 0 0 0 0 22144430.17 17372085.32 8368527.639 34732749.28 29782499.76 40253226.56 164457711.1 143839606 39693074.58 42605385.14 65461257.32 44852016.33 53608877.68 40661786.76 UDP-glucose_13C2 0 0 0 0 0 0 0 15463850.05 11075543.44 5377811.833 17275045.25 13821062.28 22941202.53 57337414.8 41158177.1 13571207.35 16434334.25 24297555.34 16741117.22 16976158.78 14418557.47 UDP-glucose_13C3 0 0 0 0 0 0 0 22506898.58 14651385.65 7145824.593 16967379.23 12771902.45 26944032.6 31743896.8 8353220.642 7581228.776 11972430.09 16293471.79 11236198.94 7355914.017 8677512.013 UDP-glucose_13C4 0 0 0 0 0 0 0 7904243.814 5072810.803 2143494.884 7124923.674 3526768.324 9516138.906 8320214.118 1835348.385 1391027.792 5817687.133 2703732.288 96026.47617 18280.63777 278995.9403 UDP-glucose_13C5 1906.140614 0 0 0 0 0 0 5000231.844 3030365.604 1225680.149 3664744.318 1549761.488 5161596.717 1919047.059 0 0 2023.242134 0 0 0 0 UDP-glucose_13C6 0 0 0 0 0 0 0 4383583.771 2515642.636 1001589.252 2562576.509 1054616.411 3587644.602 2128003.616 0 49534.56371 52329.23504 36057.84005 0 0 9791.694925 MS_METABOLITE_DATA_END #METABOLITES METABOLITES_START metabolite_name Retention index Quantified m/z PubChem ID KEGG ID Ciliatine 9.82 126.03146 339 C03557 1-Aminocyclopropanecarboxylic acid 6.86 102.05496 535 C01234 1-Methyladenosine 11.3 282.11968 27476 C02494 1-Methyl nicotinamide 12.3 138.07876 457 C02918 Aminoisobutyric acid 7.45 104.07061 6119 C03665 2-Aminophenol 3.08 110.06004 5801 C01987 2-Hydroxypyridine 4 96.04439 8871 C02502 3-Hydroxyanthranilic acid 6.61 154.04987 86 C00632 3-Methylhistidine 6.97 170.0924 64969 C01152 Nitrotyrosine 8.66 227.06625 65124 - 4-Guanidinobutanoic acid 8.38 146.0924 500 C01035 5-Amino-levulinic acid 7.66 132.06552 137 C00430 5-Aminopentanoic acid 8.71 118.08626 138 C00431 5-Methylcytosine 4.66 126.06619 65040 C02376 Acetylcholine 7.78 147.12538 187 C01996 Adenine 4.38 136.06177 190 C00147 Allothreonine 7.89 120.06552 99289 C05519 alpha-Aminoadipic acid 9.22 162.07608 469 C00956 3-Aminoisobutanoic acid 7.7 104.07061 64956 C05145 Anserine 7.56 241.12952 112072 C01262 Arginine 13.19 175.11895 6322 C00062 Asparagine 8.46 133.06077 6267 C00152 Asparagine_15N1 8.46 134.0578 beta-Alanine 8.64 90.05496 239 C00099 Betaine 5.62 118.08626 247 C00719 NAD+ 8.62 664.1164 5893 C00003 Caffeine 2.51 195.08765 2519 C07481 Carnosine 8.77 227.11387 439224 C00386 Choline 9.75 105.11482 305 C00114 cis-4-Hydroxy-D-proline 8.37 132.06552 440014 C03440 Citrulline 9.09 176.10297 9750 C00327 Coenzyme A 8.42 768.12248 87642 C00010 Creatine 8.09 132.07675 586 C00300 Creatinine 4.56 114.06619 588 C00791 Cystathionine 9.83 223.0747 439258 C02291 Cysteic acid 9.84 170.01177 25701 C00506 Cystine 9.85 241.03112 67678 C00491 Cytidine 6.13 244.0928 6253 C00475 D-Alanine 8.11 90.05496 71080 C00133 D-Alanine_13C1 8.11 91.05831 D-Alanine_13C2 8.11 92.06166 D-Alanine_13C3 8.11 93.06502 D-Alanine_15N1 8.11 91.05199 3-Dehydroxycarnitine 7.16 146.11756 134 C01181 Dethiobiotin 3.95 215.13902 445027 C01909 Diethanolamine 7.88 106.08626 8113 C06772 2-Amino-2-deoxy-D-mannose 7.81 180.08665 440049 C03570 D-Ornithine 11.73 133.09715 71082 C00515 Ethyl 3-indoleacetate 2.23 204.10191 13067 NA FAD 6.75 786.16441 643975 C00016 Glucosamine 7.88 180.08665 439213 C00329 Glutamine_13C1 8.48 148.07977 Glutamine_13C2 8.48 149.08313 Glutamine_13C3 8.48 150.08648 Glutamine_13C4 8.48 151.08984 Glutamine_13C5 8.48 152.09319 Glutamine_13C5_15N2 8.18 154.08726 Glutamine_15N1 8.48 148.07345 Glutamine_15N2 8.48 149.07049 CAR DC5:0 7.47 276.14416 71317118 NA Glutathione 9.5 308.09108 124886 C00051 Glycine 8.93 76.0393 750 C00037 Glycine_13C1 8.93 77.04266 Glyoxylic acid 7.94 72.99312 760 C00048 Oxidized glutathione 613.15924 65359 C00127 Guanidinosuccinic acid 9.51 174.05203 439918 C03139 Gulose 7.97 179.05611 10130220 C15923 Homocysteine 9.38 136.04268 91552 C00155 Homoserine 8.32 120.06552 12647 C00263 Hypotaurine 8.55 110.02703 107812 C00519 Hypoxanthine 5.21 137.04579 135398638 C00262 Indole-3-methyl acetate 2.39 190.08626 74706 NA Inosine 5.59 269.08805 135398641 C00294 Kynurenine 5.4 209.09207 161166 C00328 Alanine 8.16 90.05496 5950 C00041 Alanine_13C1 8.16 91.05831 Alanine_13C2 8.16 92.06166 Alanine_13C3 8.16 93.06502 CAR 12:0 2.37 345.28736 168381 NA Carnitine 7.19 162.11247 10917 C00318 Leucine 5.38 132.10191 6106 C00123 Leucine_15N1 5.38 133.09894 Ornithine 11.72 133.09715 6262 C00077 Lumichrome 2.8 243.08765 5326566 C01727 Lysine 12.71 147.1128 5962 C00047 Methionine 5.95 150.05833 6137 C00073 5'-Methylthioadenosine 2.76 298.09684 439176 C00170 N-6-Trimethyllysine 11.4 189.15975 440120 C03793 Dimethylarginine 10.64 203.15025 123831 C03626 N-Acetylasparagine 6.72 175.07133 99715 NA N-Acetyl-D-galactosamine 6.02 222.09721 35717 C01074 N-Acetyl-D-glucosamine 6.34 222.09721 439174 C00140 N-Acetyl-mannosamine 6.54 222.09721 439281 C00645 NADP+ 10.69 744.08273 5886 C00006 N(2)-Acetyllysine 8.34 189.12337 192590 C12989 N-ETHYL-5-METHYL-2-(1-METHYLETHYL)-CYCLOHEXANECARBOXAMIDE 2.35 212.20089 62907 NA N-Formylglycine 6.15 104.03422 75606 NA Niacinamide 3.33 123.05529 936 C00153 Nicotinamide ribotide 9.28 335.06388 14180 C00455 Nicotinic acid 4.14 124.0393 938 C00253 N-METHYL-ALANINE 7.03 104.07061 Norleucine 5.25 132.10191 21236 C01933 Norvaline 6.3 118.08626 439575 C01799 CAR 2:0 5.34 204.12303 7045767 C02571 Phosphoethanolamine 9.76 142.02637 1015 C00346 Ophthalmic acid 7.88 290.13466 7018721 C21016 o-Succinylhomoserine 7.95 220.08156 439406 C01118 Pantothenic acid 4.41 220.11795 6613 C00864 Phenylalanine 4.87 166.08626 6140 C00079 Choline phosphate 9.06 184.07332 1014 C00588 Octopamine 7.73 154.08626 440266 C04227 Proline 6.76 116.07061 145742 C00148 Pterin 5.73 164.05669 135398660 C00715 Pyridoxal 4.11 168.06552 1050 C00250 Pyridoxamine 5.34 169.09715 1052 C00534 Pyridoxine 3.86 170.08117 1054 C00314 Riboflavin 3.68 377.14556 493570 C00255 S-Adenosylhomocysteine 7.3 385.12886 439155 C00021 S-Adenosylmethionine 8.24 400.15234 34756 C00019 Sarcosine 7.67 90.05496 1088 C00213 Serine 9.02 106.04987 5951 C00716 Taurine 8.37 126.02194 1123 C00245 trans-4-Hydroxyproline 8.16 132.06552 5810 C01157 Trigonelline 5.94 138.05496 5570 C01004 Tryptamine 10.28 161.10732 1150 C00398 Tryptophan 5.9 205.09715 6305 C00078 Tyramine 9.34 138.09134 5610 C00483 Tyrosine 6.9 182.08117 6057 C00082 UDP-N-acetylgalactosamine 9.61 608.08885 1167 C00203 Valine 6.55 118.08626 6287 C00183 Xanthine 6.4 153.0407 1188 C00385 XMP 11.63 363.03474 73323 C00655 Xylose 6.97 149.04555 135191 C00181 Adonitol 151.0612 Ribose 5-phosphate_13C1 9.59 230.01523 Ribose 5-phosphate_13C2 9.59 231.01859 Methylmalonic acid_13C1 9.38 118.02269 Methylmalonic acid_13C2 9.38 119.02604 Methylmalonic acid_13C3 9.38 120.0294 Serine_13C1 9.02 107.05322 UDP-glucose_13C1 10.4 566.0511 UDP-glucose_13C2 10.4 567.05445 UDP-glucose_13C3 10.4 568.05781 UDP-glucose_13C4 10.4 569.06116 UDP-glucose_13C5 10.4 570.06452 UDP-glucose_13C6 10.4 571.06787 METABOLITES_END #END