#METABOLOMICS WORKBENCH wongw24_20240815_110239 DATATRACK_ID:5110 STUDY_ID:ST003410 ANALYSIS_ID:AN005600 PROJECT_ID:PR002111
VERSION             	1
CREATED_ON             	August 15, 2024, 11:17 am
#PROJECT
PR:PROJECT_TITLE                 	Inhibition of GPX4 enhances CDK4/6 inhibitor and endocrine therapy activity in
PR:PROJECT_TITLE                 	breast cancer.
PR:PROJECT_TYPE                  	MS quantitative analysis
PR:PROJECT_SUMMARY               	CDK4/6 inhibition in combination with endocrine therapy is the standard of care
PR:PROJECT_SUMMARY               	for estrogen receptor (ER+) breast cancer, and although cytostasis is frequently
PR:PROJECT_SUMMARY               	observed, new treatment strategies that enhance efficacy are required. We
PR:PROJECT_SUMMARY               	performed two independent genome-wide CRISPR screens to identify genetic
PR:PROJECT_SUMMARY               	determinants of CDK4/6 and endocrine therapy sensitivity. Genes involved in
PR:PROJECT_SUMMARY               	oxidative stress and ferroptosis modulated sensitivity, with GPX4 the top
PR:PROJECT_SUMMARY               	sensitiser in both screens. Depletion or inhibition of GPX4 increased
PR:PROJECT_SUMMARY               	sensitivity to palbociclib and giredestrant, and their combination, in ER+
PR:PROJECT_SUMMARY               	breast cancer models, with GPX4 null xenografts being highly sensitive to
PR:PROJECT_SUMMARY               	palbociclib. GPX4 perturbation additionally sensitised triple negative breast
PR:PROJECT_SUMMARY               	cancer models to palbociclib. Palbociclib and giredestrant induced oxidative
PR:PROJECT_SUMMARY               	stress and disordered lipid metabolism, leading to a ferroptosis-sensitive
PR:PROJECT_SUMMARY               	state. Lipid peroxidation was promoted by a peroxisome AGPAT3-dependent pathway
PR:PROJECT_SUMMARY               	in ER+ breast cancer models, rather than the classical ACSL4 pathway. Our data
PR:PROJECT_SUMMARY               	demonstrate that CDK4/6 and ER inhibition creates vulnerability to ferroptosis
PR:PROJECT_SUMMARY               	induction, that could be exploited through combination with GPX4 inhibitors, to
PR:PROJECT_SUMMARY               	enhance sensitivity to the current therapies in breast cancer.
PR:INSTITUTE                     	Genentech Inc.
PR:LAST_NAME                     	Wong
PR:FIRST_NAME                    	Weng Ruh
PR:ADDRESS                       	1 DNA Way, South San Francisco, CA 94080, USA
PR:EMAIL                         	wongw24@gene.com
PR:PHONE                         	4089048962
PR:CONTRIBUTORS                  	Herrera-Abrey MT, Guan J, Khalid U, Ning J, Costa MR, Chan J, Li Q, Fortin J-P,
PR:CONTRIBUTORS                  	Perampalam P, Biton A, Sandoval W, Vijay J, Hafner M, Cutts R, Wilson G, Frankum
PR:CONTRIBUTORS                  	J, Roumeliotis TI, Alexander J, Hickman O, Brough R, Haider S, Choudhary J, Lord
PR:CONTRIBUTORS                  	CJ, Swain, A, Metcalfe C, Tuner NC
#STUDY
ST:STUDY_TITLE                   	Lipidomics Analysis of ER+ Breast Cancer Cells Treated with Giredestrant and
ST:STUDY_TITLE                   	Palbociclib
ST:STUDY_SUMMARY                 	We observed in a previous experiment that giredestrant treatment had a profound
ST:STUDY_SUMMARY                 	impact on the lipid profile of MCF-7 cells, in particular through elevating
ST:STUDY_SUMMARY                 	PUFAs at the apparent expense of MUFAs. We hypothesize that this shift in
ST:STUDY_SUMMARY                 	PUFA/MUFA ratio underlies giredestrant-induced sensitivity to GPX4 inhibition.
ST:STUDY_SUMMARY                 	Emerging data from our lab and other suggests that palbociclib, a key
ST:STUDY_SUMMARY                 	combination partner for giredestrant in the clinic, also sensitizes to GPX4
ST:STUDY_SUMMARY                 	inhibition, and that the combination of giredestrant and palbo may synergize to
ST:STUDY_SUMMARY                 	creating an even higher sensitivity to GPX4i. Here, we aim to directly compare
ST:STUDY_SUMMARY                 	the effects on the lipidome of giredestrant and palbociclib, in MCF-7 cells (the
ST:STUDY_SUMMARY                 	discovery cell line where we already have some lipidomics data), and also T-47D
ST:STUDY_SUMMARY                 	cells, in which giredestrant, palbociclib and their combination drive a very
ST:STUDY_SUMMARY                 	profound sensitization to GPX4i, that exceeds what was observed in MCF-7 cells.
ST:STUDY_SUMMARY                 	The cells were treated with DMSO, 1 nM giredestrant, 200 nM palbociclib, or 1nM
ST:STUDY_SUMMARY                 	giredestrant plus 200nM palbociclib in quadruplicates, and collected on Day 7
ST:STUDY_SUMMARY                 	for lipid analysis. Despite their differences under basal conditions, drug
ST:STUDY_SUMMARY                 	treatments altered the lipid profiles of MCF7 and T47D cells in a similar
ST:STUDY_SUMMARY                 	manner, with 200nM palbociclib at the 7 day time point having a less pronounced
ST:STUDY_SUMMARY                 	effect than giredestrant, and with the greatest lipid changes occurring with the
ST:STUDY_SUMMARY                 	combination of palbociclib plus giredestrant. PUFA-ePLs were likewise elevated
ST:STUDY_SUMMARY                 	by giredestrant and/or palbociclib in both cell lines, with the combined action
ST:STUDY_SUMMARY                 	of both drugs generally driving greatest increases in individual PUFA-linked ePL
ST:STUDY_SUMMARY                 	species. Palbociclib combination with giredestrant enhance the accumulation of
ST:STUDY_SUMMARY                 	PUFAs-phospholipids compared to the single treatments.
ST:INSTITUTE                     	Genentech Inc.
ST:LAST_NAME                     	Wong
ST:FIRST_NAME                    	Weng Ruh
ST:ADDRESS                       	1 DNA Way, South San Francisco, CA 94080, USA
ST:EMAIL                         	wongw24@gene.com
ST:PHONE                         	4089048962
#SUBJECT
SU:SUBJECT_TYPE                  	Cultured cells
SU:SUBJECT_SPECIES               	Homo sapiens
SU:GENOTYPE_STRAIN               	MCF-7 and T-47D
#SUBJECT_SAMPLE_FACTORS:         	SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data
SUBJECT_SAMPLE_FACTORS           	-	MCF7_DMSO_1	Sample source:MCF7 breast cancer cells | Treatment:Control | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-01.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-01.mzML
SUBJECT_SAMPLE_FACTORS           	-	MCF7_9545_1	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-02.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-02.mzML
SUBJECT_SAMPLE_FACTORS           	-	MCF7_Palbo_1	Sample source:MCF7 breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-03.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-03.mzML
SUBJECT_SAMPLE_FACTORS           	-	MCF7_9plusP_1	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-04.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-04.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_DMSO_1	Sample source:T47D breast cancer cells | Treatment:Control | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-05.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-05.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_9545_1	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-06.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-06.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_Palbo_1	Sample source:T47D breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-07.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-07.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_9plusP_1	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-08.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-08.mzML
SUBJECT_SAMPLE_FACTORS           	-	MCF7_DMSO_2	Sample source:MCF7 breast cancer cells | Treatment:Control | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-09.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-09.mzML
SUBJECT_SAMPLE_FACTORS           	-	MCF7_9545_2	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-10.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-10.mzML
SUBJECT_SAMPLE_FACTORS           	-	MCF7_Palbo_2	Sample source:MCF7 breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-11.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-11.mzML
SUBJECT_SAMPLE_FACTORS           	-	MCF7_9plusP_2	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-12.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-12.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_DMSO_2	Sample source:T47D breast cancer cells | Treatment:Control | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-13.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-13.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_9545_2	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-14.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-14.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_Palbo_2	Sample source:T47D breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-15.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-15.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_9plusP_2	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-16.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-16.mzML
SUBJECT_SAMPLE_FACTORS           	-	MCF7_DMSO_3	Sample source:MCF7 breast cancer cells | Treatment:Control | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-17.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-17.mzML
SUBJECT_SAMPLE_FACTORS           	-	MCF7_9545_3	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-18.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-18.mzML
SUBJECT_SAMPLE_FACTORS           	-	MCF7_Palbo_3	Sample source:MCF7 breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-19.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-19.mzML
SUBJECT_SAMPLE_FACTORS           	-	MCF7_9plusP_3	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-20.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-20.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_DMSO_3	Sample source:T47D breast cancer cells | Treatment:Control | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-21.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-21.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_9545_3	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-22.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-22.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_Palbo_3	Sample source:T47D breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-23.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-23.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_9plusP_3	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-24.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-24.mzML
SUBJECT_SAMPLE_FACTORS           	-	MCF7_DMSO_4	Sample source:MCF7 breast cancer cells | Treatment:Control | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-25.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-25.mzML
SUBJECT_SAMPLE_FACTORS           	-	MCF7_9545_4	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-26.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-26.mzML
SUBJECT_SAMPLE_FACTORS           	-	MCF7_Palbo_4	Sample source:MCF7 breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-27.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-27.mzML
SUBJECT_SAMPLE_FACTORS           	-	MCF7_9plusP_4	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-28.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-28.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_DMSO_4	Sample source:T47D breast cancer cells | Treatment:Control | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-29.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-29.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_9545_4	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-30.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-30.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_Palbo_4	Sample source:T47D breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-31.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-31.mzML
SUBJECT_SAMPLE_FACTORS           	-	T47D_9plusP_4	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7	RAW_FILE_NAME_1=Lipidomics - 20240129 - 1-32.mzML; RAW_FILE_NAME_2=Lipidomics - 20240129 - 2-32.mzML
#COLLECTION
CO:COLLECTION_SUMMARY            	All cell lines were obtained from American Type Culture Collection (ATCC) or
CO:COLLECTION_SUMMARY            	Asterand and maintained according to the supplier's instructions. MCF-7 and T47D
CO:COLLECTION_SUMMARY            	cells were seeded at same density, 4x106 cells in RPMI medium in T175 flask (16
CO:COLLECTION_SUMMARY            	flasks each for each cell line) overnight. On day 0, the cells were treated with
CO:COLLECTION_SUMMARY            	DMSO, 1 nM giredestrant, 200 nM palbociclib, or 1nM giredestrant plus 200nM
CO:COLLECTION_SUMMARY            	palbociclib in quadruplicates. On day 4, after the cells were passaged, and
CO:COLLECTION_SUMMARY            	4x106 cells from each flask were reseeded into another T175, and continued with
CO:COLLECTION_SUMMARY            	the same treatment for 3 more days. On day 7, the cells were trypsinized and
CO:COLLECTION_SUMMARY            	counted, and 1.5-2 x106 cells from each flask were collected and frozen for
CO:COLLECTION_SUMMARY            	lipid analysis.
CO:SAMPLE_TYPE                   	Breast cancer cells
#TREATMENT
TR:TREATMENT_SUMMARY             	Time-points (n = 4; 2x10^6 cells for pelleting and submission) - Time: 7 days -
TR:TREATMENT_SUMMARY             	Treatment: DMSO; 1 nM Giredestrant (GDC-9545); 200nM Palbociclib; Giredestrant
TR:TREATMENT_SUMMARY             	(GDC-9545) + Palbo Total samples: 32
#SAMPLEPREP
SP:SAMPLEPREP_SUMMARY            	Cells were extracted with dichloromethane and methanol
#CHROMATOGRAPHY
CH:CHROMATOGRAPHY_SUMMARY        	DMS on with switching pos/neg polarity
CH:CHROMATOGRAPHY_TYPE           	None (Direct infusion)
CH:INSTRUMENT_NAME               	Sciex QTRAP 6500+ with SelexION
CH:COLUMN_NAME                   	none
CH:SOLVENT_A                     	dichloromethane/methanol (1:1), 10 mM ammonium acetate
CH:SOLVENT_B                     	dichloromethane/methanol (1:1), 10 mM ammonium acetate
CH:FLOW_GRADIENT                 	none
CH:FLOW_RATE                     	7 ul/min
CH:COLUMN_TEMPERATURE            	none
CH:SAMPLE_INJECTION              	50 ul
CH:CHROMATOGRAPHY_COMMENTS       	Method 1 with DMS on with switching pos/neg polarity
#ANALYSIS
AN:ANALYSIS_TYPE                 	MS
#MS
MS:INSTRUMENT_NAME               	ABI Sciex 6500+
MS:INSTRUMENT_TYPE               	QTRAP
MS:MS_TYPE                       	ESI
MS:ION_MODE                      	POSITIVE
MS:MS_COMMENTS                   	DMS on Data processing with Lipidyzer platform
#MS_METABOLITE_DATA
MS_METABOLITE_DATA:UNITS	nmol/250 ug protein
MS_METABOLITE_DATA_START
Samples	MCF7_DMSO_1	MCF7_9545_1	MCF7_Palbo_1	MCF7_9plusP_1	T47D_DMSO_1	T47D_9545_1	T47D_Palbo_1	T47D_9plusP_1	MCF7_DMSO_2	MCF7_9545_2	MCF7_Palbo_2	MCF7_9plusP_2	T47D_DMSO_2	T47D_9545_2	T47D_Palbo_2	T47D_9plusP_2	MCF7_DMSO_3	MCF7_9545_3	MCF7_Palbo_3	MCF7_9plusP_3	T47D_DMSO_3	T47D_9545_3	T47D_Palbo_3	T47D_9plusP_3	MCF7_DMSO_4	MCF7_9545_4	MCF7_Palbo_4	MCF7_9plusP_4	T47D_DMSO_4	T47D_9545_4	T47D_Palbo_4	T47D_9plusP_4
Factors	Sample source:MCF7 breast cancer cells | Treatment:Control | Time:Day_7	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	Sample source:MCF7 breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Control | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7	Sample source:MCF7 breast cancer cells | Treatment:Control | Time:Day_7	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	Sample source:MCF7 breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Control | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7	Sample source:MCF7 breast cancer cells | Treatment:Control | Time:Day_7	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	Sample source:MCF7 breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Control | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7	Sample source:MCF7 breast cancer cells | Treatment:Control | Time:Day_7	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	Sample source:MCF7 breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	Sample source:MCF7 breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Control | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Palbociclib_200nM | Time:Day_7	Sample source:T47D breast cancer cells | Treatment:Giredestrant_1nM_plus_Palbociclib_200nM | Time:Day_7
SM(14:0)	0.160891517	0.146025811	0.124746636	0.126233596	0.13579425	0.169685032	0.134454961	0.187386933	0.15170748	0.132800288	0.120575376	0.114625	0.134944425	0.167210656	0.149305772	0.185755901	0.169272663	0.124003181	0.141424614	0.12401161	0.128763893	0.156311793	0.144093882	0.156102085	0.172046602	0.12905167	0.156426055	0.129798493	0.150034545	0.146961959	0.151610106	0.169981199
SM(16:0)	3.549036527	3.745378644	3.480530543	3.735850087	4.857670887	7.142757804	4.818175423	7.733266323	3.533678634	3.465170959	3.551561999	3.37002316	4.880109115	7.005283434	5.041672423	7.289287078	3.758980885	3.283479277	3.791142963	3.545980363	4.805859625	6.2864477	5.094941367	6.257992898	3.942292687	3.341110582	4.14337019	3.567747383	5.286080622	6.186667402	4.98892884	6.812208521
SM(18:0)	0.282357777	0.301768104	0.281870457	0.29020699	0.182769773	0.15584693	0.225051187	0.160921133	0.275120886	0.288978346	0.273161849	0.25809025	0.187636518	0.144129068	0.233894255	0.160871817	0.26987923	0.259370166	0.30795589	0.273740378	0.178408806	0.140223723	0.238058101	0.140858135	0.294753855	0.280632274	0.323878652	0.266545564	0.194921038	0.148528683	0.232426659	0.15413468
SM(18:1)	0.044043407	0.057916477	0.051717961	0.057536035	0.043056706	0.032834161	0.057037249	0.037008568	0.043803515	0.049979436	0.051357136	0.056492977	0.036926322	0.032798711	0.056094351	0.034374562	0.041375813	0.043187633	0.057674158	0.053764087	0.042233614	0.031583082	0.055614609	0.030832402	0.048263576	0.048328216	0.061180896	0.059359776	0.044007803	0.032233717	0.052796046	0.033301566
SM(20:0)	0.342409373	0.358675957	0.289887171	0.28631742	0.195525337	0.193659736	0.245748902	0.196758444	0.313369824	0.320015763	0.297575098	0.27730833	0.215353632	0.182077362	0.259215038	0.212332727	0.344701113	0.30616888	0.341004903	0.284158596	0.186354295	0.170524118	0.25467162	0.203279668	0.363905802	0.340798624	0.386635688	0.273979638	0.247826841	0.215643807	0.273075173	0.223289734
SM(20:1)	0.036767728	0.043984056	0.026956608	0.034391954	0.013743329	0.012920302	0.023333851	0.019423676	0.034473499	0.036064285	0.028674092	0.031617493	0.014142747	0.013182683	0.02585481	0.018408174	0.034838322	0.033208447	0.031672454	0.030216913	0.013478257	0.012363133	0.023682022	0.020836253	0.034132393	0.037518689	0.037360937	0.031396474	0.018140243	0.013949324	0.024267862	0.019168375
SM(22:0)	0.743048126	1.114109692	0.70029371	0.939467429	0.592263771	0.496052621	0.60747275	0.465056924	0.665778137	1.001870031	0.735656497	0.870658413	0.671425924	0.538770285	0.656715162	0.531306109	0.774083096	0.946626376	0.837491341	0.880498494	0.584217375	0.480538983	0.630976594	0.471772403	0.814348901	1.023116878	0.927938893	0.888431723	0.77874696	0.599933276	0.671879946	0.511565387
SM(22:1)	0.241851907	0.301051025	0.209750369	0.285098751	0.137026109	0.154180732	0.20750442	0.211694651	0.233898824	0.266904954	0.2204063	0.269951926	0.137325695	0.157004686	0.215696181	0.231202942	0.254595288	0.256000225	0.241398992	0.273366887	0.127942565	0.139514119	0.213026459	0.195239921	0.27042787	0.278220902	0.276006096	0.266325097	0.154393896	0.172160043	0.222556581	0.227331177
SM(24:0)	1.032566771	2.093170414	1.512011621	2.171412998	0.867003825	0.796834042	0.987721425	1.068104562	0.955280809	1.9858874	1.520306106	1.96404768	0.887286953	0.782301923	1.001712683	1.070416073	1.05170539	1.79667226	1.700559839	1.93776551	0.821996203	0.703829489	0.997414144	0.928970422	1.110521094	1.912768238	1.854888965	1.9913711	0.964072876	0.755311627	0.983164012	0.98140806
SM(24:1)	2.519422174	2.531784325	2.62519902	2.37761041	0.94545045	0.743130527	1.273739619	0.978298135	2.403162118	2.481865219	2.514781027	2.090341638	0.943003497	0.727203763	1.244327925	1.01175371	2.550962982	2.20905256	2.820838798	2.060090947	0.894490423	0.667766227	1.21353306	0.882034434	2.719282472	2.213884239	3.087343048	2.115595743	1.041671109	0.720174879	1.198448841	0.915898434
SM(26:0)	0.294432997	0.760894244	0.567288914	0.840163863	0.126216534	0.0993717	0.118519656	0.088020982	0.266479849	0.720281221	0.576767695	0.816866084	0.137286552	0.089897771	0.124923514	0.087815859	0.297863478	0.683486008	0.652464231	0.761530614	0.111177936	0.08538942	0.114048072	0.081165859	0.287639833	0.722514021	0.689909055	0.773897719	0.134489806	0.08775555	0.120481225	0.084303466
SM(26:1)	0.701036111	0.94812317	0.994276421	0.840925908	0.121658329	0.090699845	0.130627293	0.080729002	0.665924912	0.95036002	0.990861063	0.799023451	0.118405364	0.084791094	0.138888909	0.084579656	0.73394971	0.874437985	1.075338823	0.749876116	0.115896481	0.074067537	0.134117677	0.07322044	0.736590571	0.906063208	1.208359674	0.759222981	0.131112237	0.084733431	0.13531164	0.072172207
MS_METABOLITE_DATA_END
#METABOLITES
METABOLITES_START
metabolite_name	Q1	Q3
SM(14:0)	675.5	184.1
SM(16:0)	703.6	184.1
SM(18:0)	731.6	184.1
SM(18:1)	729.6	184.1
SM(20:0)	759.6	184.1
SM(20:1)	757.6	184.1
SM(22:0)	787.7	184.1
SM(22:1)	785.7	184.1
SM(24:0)	815.7	184.1
SM(24:1)	813.7	184.1
SM(26:0)	843.7	184.1
SM(26:1)	841.7	184.1
METABOLITES_END
#END