#METABOLOMICS WORKBENCH WXIAOLAB_20230807_084934 DATATRACK_ID:4206 STUDY_ID:ST003455 ANALYSIS_ID:AN005676 PROJECT_ID:PR002128 VERSION 1 CREATED_ON September 4, 2024, 7:56 am #PROJECT PR:PROJECT_TITLE Metabolic reprogramming of pulmonary artery smooth muscle cells of idiopathic PR:PROJECT_TITLE pulmonary arterial hypertension PR:PROJECT_SUMMARY This project aims to delineate the possible mediators of aerobic activation of PR:PROJECT_SUMMARY HIF1alpha in normal primary cells and its biological consequences related to PR:PROJECT_SUMMARY pulmonary vascular pathobiology. PR:INSTITUTE Peking University PR:DEPARTMENT Department of Toxicology PR:LABORATORY WXIAO PR:LAST_NAME Xiao PR:FIRST_NAME Wusheng PR:ADDRESS 38 Xueyuan Rd, Haidian District, Beijing, Beijing, 100191, China PR:EMAIL wxiao@bjmu.edu.cn PR:PHONE +1-010-82801628 #STUDY ST:STUDY_TITLE Metabolic alterations in pulmonary artery smooth muscle cells of idiopathic ST:STUDY_TITLE pulmonary arterial hypertension (IPAH) patients. ST:STUDY_SUMMARY Hypoxia-inducible factor 1α (HIF1α) is a master regulator of biological ST:STUDY_SUMMARY processes in hypoxia. Yet, the mechanisms and biological consequences of aerobic ST:STUDY_SUMMARY HIF1α activation by intrinsic factors, particularly in normal (primary) cells, ST:STUDY_SUMMARY remain elusive. Here, we show that HIF1α signalling is activated in several ST:STUDY_SUMMARY human primary vascular cells in normoxia, and in vascular smooth muscle cells ST:STUDY_SUMMARY (VSMCs) of normal human lungs. Mechanistically, aerobic HIF1α activation is ST:STUDY_SUMMARY mediated by paracrine secretion of three branched chain α-ketoacids (BCKAs), ST:STUDY_SUMMARY which suppress PHD2 activity via direct inhibition and via LDHA-mediated ST:STUDY_SUMMARY generation of L-2-hydroxyglutarate. BCKA-mediated HIF1α signalling activation ST:STUDY_SUMMARY stimulated glycolytic activity and governed a phenotypic switch of pulmonary ST:STUDY_SUMMARY artery SMCs, which correlated with BCKA metabolic dysregulation and ST:STUDY_SUMMARY pathophenotypic changes in pulmonary arterial hypertension patients and male rat ST:STUDY_SUMMARY models. We thus identify BCKAs as novel signalling metabolites that aerobically ST:STUDY_SUMMARY activate HIF1α and that the BCKA-HIF1α pathway modulates VSMC function, an ST:STUDY_SUMMARY effect that may be relevant to pulmonary vascular pathobiology. ST:INSTITUTE Peking University ST:DEPARTMENT Department of Toxicology ST:LAST_NAME Xiao ST:FIRST_NAME Wusheng ST:ADDRESS 38 Xueyuan Rd, Haidian District, Beijing, Beijing, 100191, China ST:EMAIL wxiao@bjmu.edu.cn ST:PHONE +1-010-82801628 #SUBJECT SU:SUBJECT_TYPE Cultured cells SU:SUBJECT_SPECIES Homo sapiens SU:TAXONOMY_ID 9606 SU:GENDER Male and female #FACTORS #SUBJECT_SAMPLE_FACTORS: SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data SUBJECT_SAMPLE_FACTORS 1 PASMC-d#3 Treatment:control | Sample source:Vascular smooth muscle cells SUBJECT_SAMPLE_FACTORS 2 PASMC-D#4 Treatment:control | Sample source:Vascular smooth muscle cells SUBJECT_SAMPLE_FACTORS 3 PASMC-D#1 Treatment:control | Sample source:Vascular smooth muscle cells SUBJECT_SAMPLE_FACTORS 4 PASMC-D#2 Treatment:control | Sample source:Vascular smooth muscle cells SUBJECT_SAMPLE_FACTORS 5 PASMC-D#5 Treatment:control | Sample source:Vascular smooth muscle cells SUBJECT_SAMPLE_FACTORS 6 PASMC-IPAH L75 Treatment:IPAH | Sample source:Vascular smooth muscle cells SUBJECT_SAMPLE_FACTORS 7 PASMC-IPAH L82 Treatment:IPAH | Sample source:Vascular smooth muscle cells SUBJECT_SAMPLE_FACTORS 8 PASMC-IPAH L89 Treatment:IPAH | Sample source:Vascular smooth muscle cells SUBJECT_SAMPLE_FACTORS 9 PASMC-IPAH L95 Treatment:IPAH | Sample source:Vascular smooth muscle cells SUBJECT_SAMPLE_FACTORS 10 PASMC-IPAH L105 Treatment:IPAH | Sample source:Vascular smooth muscle cells #COLLECTION CO:COLLECTION_SUMMARY Intracellular metabolites were collected and stored at -80 degree before LC-MS CO:COLLECTION_SUMMARY analysis. CO:SAMPLE_TYPE Vascular smooth muscle cells CO:COLLECTION_METHOD -80 C precold 80% LC-MS grade methanol was used to collect cell metabolites by CO:COLLECTION_METHOD scraping and centrifugation CO:COLLECTION_LOCATION on dry ice CO:COLLECTION_DURATION 1 min CO:STORAGE_CONDITIONS -80℃ CO:TISSUE_CELL_IDENTIFICATION Pulmonary artery smooth muscle cells (PASMC) #TREATMENT TR:TREATMENT_SUMMARY human primary pulmonary artery smooth muscle cells from idiopathic pulmonary TR:TREATMENT_SUMMARY arterial hypertension patients and normal control individuals. TR:TREATMENT normal vs diseased TR:TREATMENT_COMPOUND N/A TR:TREATMENT_ROUTE N/A TR:TREATMENT_DOSE N/A TR:TREATMENT_DOSEVOLUME N/A TR:TREATMENT_DOSEDURATION N/A TR:TREATMENT_VEHICLE N/A TR:CELL_GROWTH_CONTAINER 75 cm flasks TR:CELL_GROWTH_CONFIG 1200 rpm TR:CELL_GROWTH_RATE 30-40 hours TR:CELL_MEDIA Complete vascular smooth muscle cell growth medium supplemented with growth TR:CELL_MEDIA factors and 5% FBS TR:CELL_ENVIR_COND 37 C and 5% CO2 TR:CELL_PCT_CONFLUENCE 70-80% TR:CELL_MEDIA_LASTCHANGED Every 48 hours #SAMPLEPREP SP:SAMPLEPREP_SUMMARY PASMCs were quickly washed with two volumes of ice-cold PBS, lysed for 15 min in SP:SAMPLEPREP_SUMMARY pre-chilled 80% liquid chromatography-mass spectrometry (LC-MS)-grade methanol, SP:SAMPLEPREP_SUMMARY and harvested by scraping on dry ice followed by centrifugation at maximal speed SP:SAMPLEPREP_SUMMARY for 30 min at 4°C. For medium samples, 50 μL of medium were incubated in 200 SP:SAMPLEPREP_SUMMARY μL of pre-cooled 100% LC-MS-grade methanol for 15 min on dry ice and then SP:SAMPLEPREP_SUMMARY centrifuged as cell samples did. The supernatants of cell and medium samples SP:SAMPLEPREP_SUMMARY were collected and evaporated to dryness on an Integrated SpeedVac System SP:SAMPLEPREP_SUMMARY (Thermo Fisher Scientific; Waltham, MA) at 42°C. The resulting pellets were SP:SAMPLEPREP_SUMMARY resuspended in 50 μL of LC-MS-grade water. Twenty microliters of sample were SP:SAMPLEPREP_SUMMARY loaded in an autosampler vial for analysis. SP:PROCESSING_STORAGE_CONDITIONS Described in summary SP:EXTRACT_STORAGE Described in summary #CHROMATOGRAPHY CH:CHROMATOGRAPHY_SUMMARY Vanquish ultra-high performance liquid chromatography system coupled to a Q CH:CHROMATOGRAPHY_SUMMARY Exactive mass spectrometer CH:CHROMATOGRAPHY_TYPE HILIC CH:INSTRUMENT_NAME Thermo Vanquish CH:COLUMN_NAME Merck ZIC-pHILIC(150 mm × 2.1 mm,3.5um) CH:SOLVENT_A 100% water; 20 mM ammonium carbonate; 0.1% ammonium hydroxide CH:SOLVENT_B 100% acetonitrile CH:FLOW_GRADIENT gradient (%B) was 0 min, 80%; 20 min, 20%; 20.5 min, 80%; 28 min, 80%; and 42 CH:FLOW_GRADIENT min CH:FLOW_RATE 100 CH:COLUMN_TEMPERATURE 4 #ANALYSIS AN:ANALYSIS_TYPE MS #MS MS:INSTRUMENT_NAME Thermo Q Exactive Focus MS:INSTRUMENT_TYPE Triple quadrupole MS:MS_TYPE MALDI MS:ION_MODE UNSPECIFIED MS:MS_COMMENTS The mass spectrometer was operated in polarity-switching full scan mode from MS:MS_COMMENTS 70-1000 m/z. Resolution was set to 70,000, and the AGC target was 1×106 ions. MS:MS_COMMENTS Data were acquired and analyzed using TraceFinder 4.1 (Thermo) with peak MS:MS_COMMENTS identifications based on an in-house library of authentic metabolite standards MS:MS_COMMENTS previously analyzed utilizing this method. Missing values were imputed using MS:MS_COMMENTS random forest. Sample peak areas were normalized using probabilistic quotient MS:MS_COMMENTS normalization #MS_METABOLITE_DATA MS_METABOLITE_DATA:UNITS ion intensity MS_METABOLITE_DATA_START Samples PASMC-d#3 PASMC-D#4 PASMC-D#5 PASMC-D#2 PASMC-D#1 PASMC-IPAH L75 PASMC-IPAH L82 PASMC-IPAH L89 PASMC-IPAH L95 PASMC-IPAH L105 Factors Treatment:control | Sample source:Vascular smooth muscle cells Treatment:control | Sample source:Vascular smooth muscle cells Treatment:control | Sample source:Vascular smooth muscle cells Treatment:control | Sample source:Vascular smooth muscle cells Treatment:control | Sample source:Vascular smooth muscle cells Treatment:IPAH | Sample source:Vascular smooth muscle cells Treatment:IPAH | Sample source:Vascular smooth muscle cells Treatment:IPAH | Sample source:Vascular smooth muscle cells Treatment:IPAH | Sample source:Vascular smooth muscle cells Treatment:IPAH | Sample source:Vascular smooth muscle cells oleate 5387421.726 7888655.636 6837485.286 6526834.873 7134537.822 3719243.589 3035371.117 3128002.562 2738702.053 4320416.019 ketoleucine 468513284.6 267358762.1 305936336 277391185.8 369145498 940616369.2 1146769765 630910237.1 575504199.2 832058560.2 methylthioadenosine 173831340.6 82841763.59 57587092.22 87612434.27 77812872.88 68489641.68 93318926.79 73631443.01 79515562 31896060.49 pyridoxine 1007981179 948083129.3 951265289.8 989151026.8 1140136302 1761064941 2099723724 1291856779 1514697040 1832474804 2-hydroxybutyrate 2042648.896 1915483.714 1963514.875 2575008.155 2736049.012 3773031.281 3807016.261 2474615.195 3007558.997 3450904.902 butyrylcarnitine 40416872.24 27409015.88 26511657.04 25586319.52 28795112.36 71794248.56 122888267 54647816.52 119566350.3 60418302 pantothenate 5232115582 3356041954 3502858664 3750728383 4047827777 6603517869 8259192500 5822782897 10799060409 6492477637 pyruvate 31043174.82 51570168.4 46903147.43 58763296.13 65366202.01 65000478.96 54931623.97 58927195.19 113822582.6 99153735.43 acetylalanine 14371676.94 8670893.946 9079316.3 8959820.879 9089299.654 16151601.98 28963398.36 19974974.63 31226556.13 18566668.42 creatinine 474963414.8 387373256.6 398653311.9 428411960.3 478604929.1 706736431 851545840.5 548905295.2 662480134.7 729800885.8 3-hydroxybutyrate 2977890.443 1927915.863 3902284.749 3493322.012 4185173.606 4839638.834 4792094.997 3411610.175 4917828.219 2308229.363 uridine 328647.89 482204.7912 396351.9262 516372.2895 522974.8337 412422.6498 269787.4088 122376.9368 211003.9032 135096.9175 deoxycytidine 299996.5347 23815.63189 57817.46483 130547.5522 12852.56584 858500.3807 609468.9255 388789.2437 193647.6208 169773.3014 hypoxanthine 20638750.66 58431043.47 59080099.42 62732393.71 67103910.58 9483664.883 4175348.545 13880399.09 6142810.602 14057696.21 glycerol 11261092.73 7965982.714 7368705.228 9513509.913 9745251.691 5157515.531 2899664.803 16692505.68 2229107.391 3628929.126 kynurenine 2788920.959 2546607.612 2610610.247 2860302.018 3103621.566 6982410.714 4298138.947 4838714.849 3429219.752 4866892.451 leucine 7367995448 5603292128 5715494732 5854376372 6485979062 12496487671 11697202223 8812537010 8228504251 10740627265 orotate 1091109.564 38370.81763 64804.07085 184726.081 71306.42072 742873.3424 640792.1512 312034.2298 1065300.511 589554.0773 o-acetylcarnitine 294741728.6 446164778.2 430117292.7 456596373.4 465021896 449069066.3 483733590.5 498004775.2 556254642.2 543932366.8 acetylglutamine 4628053.154 2920068.804 3129428.378 3365558.787 3478346.362 3835626.454 7447891.648 6476997.943 10177721.8 5977491.289 betaine 354091324 305686485 329896759.2 330422284.9 365708001.7 577453574.8 640635707.5 449578310.1 745608890.7 529315715.8 isoleucine 3549725099 2419319370 2499922757 2568502642 2718153218 6464756137 5391823708 4174956697 3602527701 4892838767 methionine 926953329.2 632840489.1 630753269.3 638878787 700495269.5 1682593066 1367066266 1071050364 959900592.4 1239946452 tryptophan 158790009.6 96884596.12 97118709.59 99425607.91 109140791.8 282367055.4 246622966.2 186289871.3 145642345.9 213619085.7 xanthine 34299662.84 25820959.5 27804324.77 29440825.51 33387768.69 57829790.75 61775457.79 40990669.13 44919862.55 55686447.26 glycerate 3033833.277 3578012.865 4034219.776 3856338.47 4133203.09 3430128.15 3589151.137 3003121.366 3638472.721 3588402.322 valine 2847349731 2071001815 2101849389 2221842356 2424495790 4238421720 3980105975 3019258457 2572762316 3847992572 acetylcholine 142999971.1 108493549.6 113154985.7 106785400.8 111409429.1 245426411.1 276134649.6 224200739.5 299391466.5 175797146.9 tyrosine 367448560.5 244179356.9 251125958.3 253448869.6 285975523.4 596281124.1 509371879.2 383784792.9 332067211.6 471112810.4 methionine sulfoxide 22513332.63 17694163.81 18990547.94 23205046.05 23454537.94 38242073.44 26940065.23 21600704.68 22775835.44 24643468.32 1-methyladenosine 11727725.23 4517378.049 4161728.717 6331165.386 3698341.855 11594082.07 18192894.92 8274496.879 7739860.69 8615408.301 AMP 109570517.8 41985618.56 39299626.26 45073446.39 47462361.82 72008232.63 65531515.48 65100629.84 68392544.17 56901927.16 sorbitol 13495072.9 37189593.39 35002892.06 14376158.67 17986236.53 25018607.43 29777689.28 17841180.11 18807770.05 22918907.49 threonine 238113177.9 207549929.3 211993585 216457270.8 222238390.9 312077130.2 272230341.2 258518397.3 191919489.8 290442929.1 allantoin 27379194.14 23266032.14 23226154.34 26691941.86 29039811.09 49359394.56 51006825.17 38502237.77 41886523.08 46874184.59 creatine 6775045437 4155700496 4100488413 4397971112 4232822460 7283086864 14719035828 5310300527 13432293477 6515288684 acetylglutamate 43380868.77 35427731.08 36705754.44 42127177.52 40532707.34 49642178.1 264434506.7 78133877.98 148004382.5 53454888.56 glutamine 22037935185 18233476606 18366953602 19115589350 18921368301 26746565649 23356154500 21991522224 23152143309 24967125722 alanine 218888026.4 157472606.6 152139459.2 151775961.5 147683481.3 459080694.2 348335188.4 229556919.7 249638728.5 335745893 glucose 17522730.96 66991946.83 47184237.62 57264806.06 62936160.91 43869045.68 62873832.03 35584397.32 37147812.27 79374450.44 histidine 1458633556 968726794.9 974364305.5 1014743844 964947314.3 2430158457 2261640428 1652215108 1201642118 2119270235 phosphocholine 9127462351 7983421135 7974903878 7363270611 8202320408 9112402838 8868941135 10857323155 10215621139 8166171608 aminoadipate 22035464.12 13950107.1 13255731.86 13644316.86 13311201.08 10166908.16 43897839.46 51428948.34 61409584.19 17240522.37 asparagine 201150290.8 138279781.5 136207168.8 137667002.1 136299759.9 273465860 225855323.1 221545401.5 192923956.8 226665818.7 SAM 16852951.08 20474484.79 20691930.76 20186172.49 19444152.92 49343373.9 48470706.91 35518093.76 59247936.99 42422287.5 taurine 37461815.04 21704963.23 21178804.73 21814097.59 23655688.51 128994555.3 169257092.1 120319367 132056576 45883676.73 beta-alanine 18957808.15 15354246.98 13193653.38 13959961.02 12690724.29 44469962.36 78421637.12 30346696.51 34370047.4 30283004.73 choline 5388399.222 3429638.253 2812766.058 3483621.051 4187156.56 9158678.739 4857412.149 4475530.965 8078821.852 5101699.238 glycine 117254098.2 81212436.19 75822897.68 81438764.36 80652844.98 151845515 199541652.8 164163705.8 124176407 119408872.2 serine 179556761.6 147711506.2 140218270.6 142498945.3 155960732.9 163616067 216378693.2 178138515.5 160777877.4 209482681.2 2-hydroxyglutarate 103596187.5 68338826.67 77444880.36 73925729.51 79615389.95 140446799.1 178578458.4 126384380.2 151748042.2 120440412.7 citrulline 23409890.85 11267339.22 11177202.49 12674616.31 14372491 40833622.83 46425561.62 28898855.84 27654020.8 37140936.97 guanidinoacetate 653345.2805 713824.5085 748817.6859 845707.7761 943598.6723 1766551.995 1651455.258 917912.2963 834329.2876 1407371.01 o-phosphoethanolamine 6710668.352 18017557.75 17502751.86 15074919.44 16470528.06 1791779.875 17217248.42 12241442.56 3885570.372 33376504.68 2-oxoglutarate 128703827.1 87268498.46 87114462.4 83701214.58 85866541.43 209333591.3 234682182.6 195174092.4 265787530.7 213055902.5 glucose 1-phosphate 8251580.55 1829998.129 2434057.428 3864573.487 4214114.82 10185041.57 9180474.949 6743092.01 15813979.41 4283052.183 cystine 4548466.513 3194316.92 1709224.26 2240520.816 1892054.367 1958934.617 1565038.438 948924.5483 740520.7003 1187804.922 fumarate 55550255.39 30478629.8 27887687.88 31719867.31 30418102.24 89253074 65527883.94 51730348.65 80733428.08 60679243.96 malate 1047297804 557506004.6 513075416.7 592943043.5 559905983.6 1548198665 1149072203 906557466.5 1392003785 1032089925 glucuronate 6691305.142 5181745.661 4762837.727 5192469.786 5605125.901 5423716.438 9618722.177 7096765.359 5877404.784 4802835.303 cystathionine 10919300.07 3911229.974 3569071.93 3928550.134 4070087.968 25088652.85 13675627.03 13960112.35 12736009.38 9854734.073 glucose 6-phosphate 7322348.57 7144175.08 6363834.293 6481336.404 6737743.447 14081335.38 10266160.31 11327877.4 18868984.83 9133951.37 CDP 10951055.25 3698799.219 2617429.601 4121133.77 4528584.978 2545224.175 5046326.804 3420293.486 4048282.068 2385044.185 GSSG 25761631.29 30549979.94 28920734.9 34498820.24 34363298.92 51470135.31 46551190.87 30375505.18 39356167.23 33556797.59 myo-inositol 62784669.76 74319094.37 71080672.58 71978215.27 76124391.33 49344039.97 101929411.2 71006875.29 20963708.33 38853177.92 3-phosphoglycerate 122963459.9 53777815.13 51612347.69 49006818.26 64501551.38 87249837.29 123433574.1 85718600.42 106860181 112188897 phosphoenolpyruvate 15016673.76 3354774.797 3562928.252 3241426.536 4525920.208 8528104.642 12316668.4 7048357.638 8422551.514 12597787.29 aconitate 112550889.6 75625836.58 75833580.26 74387970.49 78985117.85 201389050.4 135265408.1 138011206.7 218956046.2 158344834.7 citrate 1005390749 617677168.5 646800680.4 621114871 712604717.3 1492473087 1198113229 1080586800 1644580336 1167973441 trimethyllysine 77524242.47 40755263.94 44920891.71 45236701.99 46864568.2 129608478.7 126401268.2 95718882.43 111864148 81123917.23 lysine 511574262.4 398891385.2 481333284.1 492223929.9 607219393.3 905504389.4 1439584159 713508483 818830605.3 1036804754 arginine 1102715709 956484048.6 1045321813 1054923894 1208220919 1554315403 2210626356 1377836422 1499448142 1724942379 palmitate 171884387.7 182772569.4 188273937.8 220949398.1 205158455.1 121642806.2 84703983.23 87180965.82 117687442.1 79038731.87 stearate 301115136.1 350248603.9 372407521 399268329.6 408264220.2 58422971.52 43222653.46 45289310.28 62521815.79 48534171.89 thymidine 576809.7144 363935.231 233056.4517 249983.6389 395891.1189 570953.4626 586263.0372 393526.8353 445674.5844 415691.4698 niacinamide 1447766940 1627529127 1521167229 1547590712 1794928578 2634958128 3270509188 1962581648 2428648286 2772271205 pyridoxal 54729197.25 30911115.49 34593133.66 32258326.72 35093911.22 95485874.16 74960343.83 73320734.45 59406401.8 56568670.66 propionylcarnitine 77632836.77 81077492.54 81419193.66 75141575.57 86705794.3 180095275.1 177295134.6 155467295.4 179152735.5 142802348.2 phenylalanine 2549137423 1663855168 1714165555 1721557681 1921312922 4771507336 4054384359 2967098003 2626549698 3586968899 inosine 3932327.198 1420202.976 1490375.818 1614086.57 2372913.745 2644889.75 603509.4294 2400477.455 1698795.444 973366.2206 cytidine 1855247.993 605726.2852 597994.3817 580458.832 703744.2107 3896927.232 2003170.204 1246680.278 1568847.906 1471265.663 FAD 515092.2491 310799.7835 209910.7857 148942.1494 45517.9879 388811.5805 287794.5424 185178.318 284234.0378 219137.4452 proline 13202065641 9508153860 9221102994 9239163088 9577482057 19320631797 19314948391 17317461011 20627108946 15259662843 xanthosine 52279.20842 155032.6635 101457.9733 149090.9043 197509.2916 16723.68851 38579.93668 38579.93668 44078.52751 54937.59404 ribitol 8775012.017 7221458.99 7009393.128 6770879.197 7215865.755 10041464.46 17314487.77 8816218.337 8475479.603 9473784.13 fructose 23704996.62 32813116.34 28530696.25 31404117.78 33425478.02 39396564.23 58051693.65 28452522.6 33160537.89 52589341.32 carnitine 367941128.2 413872679.2 428181426.7 406663795.3 436645539.2 800437167.8 880244424.7 555750894.5 776033487.1 681269538.4 SAH 87617160.51 25273833.29 16594424.25 29416094.45 24507079.04 30922321.46 31284893.23 25102682.1 24234705.54 16819485.41 dTMP 66797.13335 5877.532759 26735.61327 26735.61327 7532.173693 83157.95501 57926.66883 29740.77419 29928.55676 38486.38659 coenzyme A 3395632.325 2162678.214 2263834.481 1689618.022 2332865.883 2892233.361 4151367.794 2603230.487 4059355.724 2703649.725 urate 11941398.47 7656536.829 9115964.899 8401800.669 10648072.81 19357680.29 27364066.78 20252844.09 15273530.1 23179017.95 o-acetylserine 1323124.636 969585.9849 1191186.143 1280847.809 1191186.143 1419450.204 1077234.672 1113127.896 838620.7701 937739.8164 NAD 223246147.6 169280784.9 162372368 173171812.2 184331467.1 372063031.9 283545449.2 292983446.7 334165395.2 234941626.5 glycerophosphocholine 1971693227 1331391178 1325241510 1323147705 1362174852 2743604605 3121849881 1965468177 4103913704 1752034018 pseudouridine 4182433.176 4898557.476 4475351.644 5220884.328 4703055.781 6531043.625 8546865.561 7281097.687 10303843.16 4986046.922 hydroxyproline 230476149.5 169735721 168636787.3 191024970.4 191230082.7 409265708.1 258556642 243096306.4 462340953.4 307650049.4 GSH 5091918826 3907696316 3736266004 3945184724 3914858747 5028816046 5259772496 3976504333 5869100301 5364624347 hypotaurine 1353419.422 353029.0293 142981.147 218083.6938 516878.3229 1234251.431 3430585.178 1879415.048 1359459.624 389623.6113 acetylaspartate 107453396.2 184881220 197317429.2 166858214.2 203335973.9 51179969.92 278132074.9 121535410.2 365504463.5 78602051.39 glutamate 3743374018 3807452121 3793646503 3795472758 3815519187 5024875789 3907242210 5366676018 5058470713 4415756745 carnosine 8546989.351 6573334.365 6832202.859 7164897.848 7791910.1 13227178.27 17774539.87 10185269.65 10797197.73 13846179.65 citicoline 10278022.04 12577850.73 10482463.48 11169607.9 9347273.566 12037280.92 13667074.47 11421415.91 18528479.78 18282034.62 glycerol 3-phosphate 17259261.16 21873895.29 24250930.18 17178511.5 21150555.42 15401928.48 22833616.05 17920842.25 45273219.4 28997859.64 phosphocreatine 381698846.2 220440186.1 209572265.5 210518232.6 202945846 120617541.1 567745605.3 177411719.8 451618731.7 201345384 UDP-GlcNAc 180853731.1 160440403.4 147316011 148608649.8 152070946.1 148090694.2 288089300.7 149909277.1 145930538.3 272644498.5 UMP 12483920.07 3105961.216 2777028.295 4116161.604 4104739.978 2975515.028 4488671.873 4233203.043 3268409.583 3092125.082 ADP 142061736.1 42032458.52 30754254.09 50687194.43 52135179.69 36601102.44 59568578.81 51091011.4 41316136.12 30009005.16 aspartate 833731244.3 912340773.9 866615291.6 1010005404 924390261.4 1183874294 589532828.3 849329197.4 1426343877 992626499.7 DHAP 8207481.675 3623901.36 3941780.067 3280394.066 3118304.109 9456321.899 11958086.4 4364693.6 9647730.743 11830151.21 GABA 51420973.02 26284234.01 26786662.12 29611358.51 27374288.35 45558926.23 59615168.61 40354099.09 75648238.36 61371658.79 IMP 546818.4623 382519.2112 350592.5744 308238.3451 272847.5892 418110.1178 643500.531 298101.5491 454856.2842 409704.464 ribose 5-phosphate 779857.4704 734883.1846 731357.9503 538559.0247 554783.6589 1287434.101 1743352.689 1177066.881 1405701.334 1473902.261 succinate 49053101.73 43370438.4 43379481.73 42100897.35 47480815.76 129989567.9 77508176.27 72541702.13 80152798.46 83019762.36 CMP 1401424.752 713439.7507 617756.7616 772327.9386 876237.3007 919536.1181 0 0 0 851408.5995 ATP 262668299.1 211892547.3 202843495.7 177334402.2 228786233 241525554.5 331416289.4 257205559.4 309350099.2 267847232 CDP-ethanolamine 2318851.365 3059313.74 2508082.572 2952330.245 2885433.105 856893.7863 2468390.02 3068733.995 2110887.463 3248059.005 phosphoserine 7972295.602 19860075.41 15135294.22 20135151.66 19092545.12 459773.1949 3640609.322 2666363.072 2149573.742 4182578.924 glyceraldehyde 3-phosphate 72003169.83 35707529.73 33695306.62 32432137.79 34395942.44 33218540.98 87258362.72 65626823.75 35600182.5 53646694.47 sedoheptulose 7-phosphate 2747008.492 813875.0593 703473.5357 580373.4529 813796.8503 2614484.747 3845791.236 2320070.337 5735128.863 1575912.052 UDP 44820187.96 15268813.02 11038334.09 18376712.1 19928972.19 16356420.37 22513425.41 17561286.38 21010316.13 10413699.68 argininosuccinate 5413820.335 1688362.204 1528435.749 1562714.599 1611176.421 4778411.838 6335545.986 3434742.708 4605005.511 3488634.792 carbamoylaspartate 7311471.309 3461991.115 2725261.508 3419304.372 2984474.061 8489880.6 12664976.2 5140923.711 10897084.07 9116628.247 UDP-glucose 95307226.33 83255885.76 73342764.48 72410676.68 80965470.38 139445380.8 99865766.89 112843032.4 147660580 87869567.57 GMP 1954713.151 764828.4648 593827.9594 894704.6684 930207.0455 324188.188 798498.4965 1140950.231 601010.6749 399752.2335 NADP 2622504.71 1525685.291 1465407.325 1409394.887 1807925.655 1732069.016 2434842.994 1812639.704 1742656.307 1686578.591 NADPH 3567647.564 2349128.192 2201025.738 1730876.415 2387620.388 2519121.728 4552625.602 1962872.477 2991970.736 3063520.392 GDP 9352080.729 3971868.891 3248803.826 3995148.465 4882169.992 3038290.64 5639877.808 4189797.186 3873506.628 3075401.473 glucaric acid 3107435.571 3017432.108 3226285.616 3023245.776 3735665.352 3647270.693 6152209.431 5782239.453 6233251.539 3846079.324 CTP 16523708.35 13393381.07 14261568.87 11365929.37 15157940.26 14029441.58 21023056.19 11420236.17 23073870.92 16395939.72 fructose 1,6-bisphosphate 46157755.78 20286652.62 19681240.04 16057182.16 21105233.59 48563380.48 76057168.76 33428305.32 45810242.81 37088558.2 UTP 47110625.95 40927650.95 40726318.89 33981971.17 45833515.04 51292402.63 65912094.73 37379777.11 76480923.6 46596873.41 thiamine 414931450.6 341825677.9 345567566.3 354538703.3 387567669.4 813618244.7 855947649.5 633434454.7 581939687.7 666031048.7 GDP-mannose 1563921.861 1157751.381 1166983.585 1006022.93 1310977.222 2857221.794 2167484.338 1970399.689 2678107.247 1994324.098 UDP-glucuronate 17995462.38 10784073.01 10710316.23 8849838.382 12600629.02 9102414.925 26792537.86 12142453.16 5507713.121 15629236.15 GTP 11897400.42 10114112.61 11038531.06 8415811.803 12114216.65 9488949.642 16615713.16 9726001.062 12886945.02 12810130.25 acetylmethionine 44623722.5 19419165.02 20672041.25 20929262.23 21361466.58 67412302.3 59597597.95 38809069.34 49640803.78 58440526.26 lactate 1761275373 932186132.2 1031450859 1054881249 1161030085 2858476296 3702914513 1942709202 2201474706 2567957323 NADH 13034161.86 4711547.708 4275575.807 4271109.437 4883897.138 7446223.583 12672812.08 5672611.644 4659664.865 7533119.437 ornithine 9023343.905 10316315.39 12235884.45 12524849.86 14153514.93 22994912.56 26105821.8 18260800.99 27484208.59 16669595.93 MS_METABOLITE_DATA_END #METABOLITES METABOLITES_START metabolite_name oleate ketoleucine methylthioadenosine pyridoxine 2-hydroxybutyrate butyrylcarnitine pantothenate pyruvate acetylalanine creatinine 3-hydroxybutyrate uridine deoxycytidine hypoxanthine glycerol kynurenine leucine orotate o-acetylcarnitine acetylglutamine betaine isoleucine methionine tryptophan xanthine glycerate valine acetylcholine tyrosine methionine sulfoxide 1-methyladenosine AMP sorbitol threonine allantoin creatine acetylglutamate glutamine alanine glucose histidine phosphocholine aminoadipate asparagine SAM taurine beta-alanine choline glycine serine 2-hydroxyglutarate citrulline guanidinoacetate o-phosphoethanolamine 2-oxoglutarate glucose 1-phosphate cystine fumarate malate glucuronate cystathionine glucose 6-phosphate CDP GSSG myo-inositol 3-phosphoglycerate phosphoenolpyruvate aconitate citrate trimethyllysine lysine arginine palmitate stearate thymidine niacinamide pyridoxal propionylcarnitine phenylalanine inosine cytidine FAD proline xanthosine ribitol fructose carnitine SAH dTMP coenzyme A urate o-acetylserine NAD glycerophosphocholine pseudouridine hydroxyproline GSH hypotaurine acetylaspartate glutamate carnosine citicoline glycerol 3-phosphate phosphocreatine UDP-GlcNAc UMP ADP aspartate DHAP GABA IMP ribose 5-phosphate succinate CMP ATP CDP-ethanolamine phosphoserine glyceraldehyde 3-phosphate sedoheptulose 7-phosphate UDP argininosuccinate carbamoylaspartate UDP-glucose GMP NADP NADPH GDP glucaric acid CTP fructose 1,6-bisphosphate UTP thiamine GDP-mannose UDP-glucuronate GTP acetylmethionine lactate NADH ornithine METABOLITES_END #END