#METABOLOMICS WORKBENCH qiuxu_20240928_073436 DATATRACK_ID:5245 STUDY_ID:ST003510 ANALYSIS_ID:AN005764 PROJECT_ID:PR002155
VERSION             	1
CREATED_ON             	October 2, 2024, 10:06 pm
#PROJECT
PR:PROJECT_TITLE                 	NMR spectra of water-soluble extracts of mouse colon cancer tissue and colon
PR:PROJECT_TITLE                 	cancer CT26 cells
PR:PROJECT_TYPE                  	NMR
PR:PROJECT_SUMMARY               	In this study, we investigated the role of 3-Hydroxybutyrate (3-HB) in colon
PR:PROJECT_SUMMARY               	cancer cachexia (CAC). We used a CAC mouse model and CT26 colon cancer cells. We
PR:PROJECT_SUMMARY               	used NMR-based metabolomics to investigate 3-HB effects on colon tissue and cell
PR:PROJECT_SUMMARY               	metabolism.
PR:INSTITUTE                     	Xiamen University
PR:LAST_NAME                     	Qiu
PR:FIRST_NAME                    	Xu
PR:ADDRESS                       	Xiamen University
PR:EMAIL                         	qiuxu@stu.xmu.edu.cn
PR:PHONE                         	13395036603
#STUDY
ST:STUDY_TITLE                   	3-Hydroxybutyrate Suppresses Colon Cancer Growth through Metabolic Reprogramming
ST:STUDY_TITLE                   	and Monocarboxylate Transporter-Mediated Lactate Accumulation
ST:STUDY_SUMMARY                 	Cancer cachexia (CAC) remains a challenging complication in colon cancer, often
ST:STUDY_SUMMARY                 	leading to poor clinical outcomes. This study investigates the therapeutic
ST:STUDY_SUMMARY                 	potential of 3-hydroxybutyrate (3-HB) in CAC by exploring its effects on tumor
ST:STUDY_SUMMARY                 	growth and cellular metabolism using a colon CAC mouse model and CT26 colon
ST:STUDY_SUMMARY                 	cancer cells. Through NMR-based metabolomics and molecular biology approaches,
ST:STUDY_SUMMARY                 	we reveal that 3-HB slows tumor growth in CAC mice, potentially by increasing
ST:STUDY_SUMMARY                 	lactate accumulation within tumor tissues, modulating key metabolic pathways.
ST:STUDY_SUMMARY                 	Additionally, 3-HB induced oxidative stress and apoptosis in CT26 cells,
ST:STUDY_SUMMARY                 	characterized by elevated reactive oxygen species (ROS) and caspase-3
ST:STUDY_SUMMARY                 	activation. Mechanistically, 3-HB appears to compete with lactate for
ST:STUDY_SUMMARY                 	monocarboxylate transporters (MCTs), leading to intracellular lactate
ST:STUDY_SUMMARY                 	accumulation, cellular acidification, and tumor suppression. These findings
ST:STUDY_SUMMARY                 	suggest that 3-HB holds promise as a therapeutic agent for colon cancer
ST:STUDY_SUMMARY                 	cachexia, offering new insights into metabolic targeting strategies for cancer
ST:STUDY_SUMMARY                 	treatment.
ST:INSTITUTE                     	Xiamen University
ST:LAST_NAME                     	Qiu
ST:FIRST_NAME                    	Xu
ST:ADDRESS                       	Xiamen University
ST:EMAIL                         	qiuxu@stu.xmu.edu.cn
ST:PHONE                         	13395036603
#SUBJECT
SU:SUBJECT_TYPE                  	Mammal
SU:SUBJECT_SPECIES               	Mus musculus
SU:TAXONOMY_ID                   	10090
#SUBJECT_SAMPLE_FACTORS:         	SUBJECT(optional)[tab]SAMPLE[tab]FACTORS(NAME:VALUE pairs separated by |)[tab]Raw file names and additional sample data
SUBJECT_SAMPLE_FACTORS           	-	CAC-C16	Sample source:colon tumor tissue | Factors:Treatment CAC	Subject_ID=-; Fid ID=34
SUBJECT_SAMPLE_FACTORS           	-	CAC-C12	Sample source:colon tumor tissue | Factors:Treatment CAC	Subject_ID=-; Fid ID=40
SUBJECT_SAMPLE_FACTORS           	-	CAC-C6	Sample source:colon tumor tissue | Factors:Treatment CAC	Subject_ID=-; Fid ID=41
SUBJECT_SAMPLE_FACTORS           	-	CAC-C17	Sample source:colon tumor tissue | Factors:Treatment CAC	Subject_ID=-; Fid ID=46
SUBJECT_SAMPLE_FACTORS           	-	CAC-C11	Sample source:colon tumor tissue | Factors:Treatment CAC	Subject_ID=-; Fid ID=48
SUBJECT_SAMPLE_FACTORS           	-	CAC-C9	Sample source:colon tumor tissue | Factors:Treatment CAC	Subject_ID=-; Fid ID=53
SUBJECT_SAMPLE_FACTORS           	-	CAC-C3	Sample source:colon tumor tissue | Factors:Treatment CAC	Subject_ID=-; Fid ID=54
SUBJECT_SAMPLE_FACTORS           	-	CAC-C1	Sample source:colon tumor tissue | Factors:Treatment CAC	Subject_ID=-; Fid ID=55
SUBJECT_SAMPLE_FACTORS           	-	CACK-CK18	Sample source:colon tumor tissue | Factors:Treatment CACK	Subject_ID=-; Fid ID=77
SUBJECT_SAMPLE_FACTORS           	-	CACK-CK6	Sample source:colon tumor tissue | Factors:Treatment CACK	Subject_ID=-; Fid ID=66
SUBJECT_SAMPLE_FACTORS           	-	CACK-CK7	Sample source:colon tumor tissue | Factors:Treatment CACK	Subject_ID=-; Fid ID=67
SUBJECT_SAMPLE_FACTORS           	-	CACK-CK8	Sample source:colon tumor tissue | Factors:Treatment CACK	Subject_ID=-; Fid ID=68
SUBJECT_SAMPLE_FACTORS           	-	CACK-CK9	Sample source:colon tumor tissue | Factors:Treatment CACK	Subject_ID=-; Fid ID=69
SUBJECT_SAMPLE_FACTORS           	-	CACK-CK11	Sample source:colon tumor tissue | Factors:Treatment CACK	Subject_ID=-; Fid ID=71
SUBJECT_SAMPLE_FACTORS           	-	CACK-CK13	Sample source:colon tumor tissue | Factors:Treatment CACK	Subject_ID=-; Fid ID=73
SUBJECT_SAMPLE_FACTORS           	-	CACK-CK14	Sample source:colon tumor tissue | Factors:Treatment CACK	Subject_ID=-; Fid ID=74
#COLLECTION
CO:COLLECTION_SUMMARY            	Approximately 100 mg of mouse tumor tissue was collected and pre-cooled
CO:COLLECTION_SUMMARY            	methanol, chloroform and water (4:4:2.85, v/v) were added in a sequential
CO:COLLECTION_SUMMARY            	manner. After vortex mixing, the tissue was completely homogenised using a
CO:COLLECTION_SUMMARY            	pre-cooled cryogenic tissue grinder (65 Hz, 3 min). The metabolites were then
CO:COLLECTION_SUMMARY            	extracted from the tumor tissue in two phases. The upper aqueous phase was
CO:COLLECTION_SUMMARY            	collected by centrifugation at 4°C and 12,000 rpm for 10 min. Nitrogen was used
CO:COLLECTION_SUMMARY            	to accelerate volatilisation of methanol from the aqueous phase and transfer to
CO:COLLECTION_SUMMARY            	a freeze dryer for removal of water.
CO:SAMPLE_TYPE                   	Tumors
#TREATMENT
TR:TREATMENT_SUMMARY             	The tumor-bearing mice were randomly assigned to two groups and subjected to the
TR:TREATMENT_SUMMARY             	corresponding interventions. One group of tumor-bearing mice received a daily
TR:TREATMENT_SUMMARY             	intraperitoneal injection of ethyl 3-hydroxybutyrate at a dose of 2 mM/kg per
TR:TREATMENT_SUMMARY             	day (CACK, n = 8), and correspondingly, the other group of tumor-bearing mice
TR:TREATMENT_SUMMARY             	(CAC, n = 8), as well as the control group (NOR, n = 8), was injected daily with
TR:TREATMENT_SUMMARY             	an equal volume of PBS. all mice were subjected to a total of 21 days of the
TR:TREATMENT_SUMMARY             	intervention. All mice were euthanised on Day 28 post-modelling and sampled.
#SAMPLEPREP
SP:SAMPLEPREP_SUMMARY            	The processed metabolite samples were dissolved in NMR buffer (pH 7.4), prepared
SP:SAMPLEPREP_SUMMARY            	in D2O, 50 mM PO₄³-, 0.05 mM 3-(trimethylsilyl) propionate sodium-2,2,3,3-d4
SP:SAMPLEPREP_SUMMARY            	(TSP), and subsequently transferred to 5 mm NMR tubes for acquisition of
SP:SAMPLEPREP_SUMMARY            	metabolite NMR spectra on a Bruker Avance III HD 850 MHz spectrometer for
SP:SAMPLEPREP_SUMMARY            	acquisition of metabolite NMR spectra. One-dimensional (1D) 1H-NMR spectrum
SP:SAMPLEPREP_SUMMARY            	acquisition: 1H-NMR spectra were acquired at 298 K on a Bruker Avance III 850
SP:SAMPLEPREP_SUMMARY            	MHz spectrometer (Bruker BioSpin GmbH, Germany) with the pulse sequence
SP:SAMPLEPREP_SUMMARY            	NOESYGPPR1D [RD-G1-90°-t-90°-τm-G2-90°-ACQ]. The spectral width was set at
SP:SAMPLEPREP_SUMMARY            	20.00 ppm, with 32 scans, a mixing time of 10 ms, and an additional relaxation
SP:SAMPLEPREP_SUMMARY            	delay time of 4 s.
#ANALYSIS
AN:ANALYSIS_TYPE                 	NMR
#NMR
NM:INSTRUMENT_NAME               	Bruker Avance III HD 850 MHz
NM:INSTRUMENT_TYPE               	FT-NMR
NM:NMR_EXPERIMENT_TYPE           	1D-1H
NM:STANDARD_CONCENTRATION        	1 mM TSP
NM:SPECTROMETER_FREQUENCY        	850 MHz
NM:NMR_SOLVENT                   	H2O+D2O
NM:NMR_TUBE_SIZE                 	5 mm
NM:PULSE_SEQUENCE                	noesygppr1d [(RD)-90°-t1-90°-τm-90°-ACQ]
NM:RECEIVER_GAIN                 	57
NM:OFFSET_FREQUENCY              	15.03 ppm
NM:TEMPERATURE                   	25
NM:NUMBER_OF_SCANS               	32
NM:DUMMY_SCANS                   	4
NM:ACQUISITION_TIME              	2 s
NM:SPECTRAL_WIDTH                	20 ppm
NM:NUM_DATA_POINTS_ACQUIRED      	64 K
NM:LINE_BROADENING               	0.3 Hz
NM:BASELINE_CORRECTION_METHOD    	Auto-baseline correction of integral by abs
NM:CHEMICAL_SHIFT_REF_STD        	TSP (0.000 ppm)
NM:NMR_RESULTS_FILE               	ST003510_AN005764_Results.txt	UNITS:ppm
#END