Summary of Study ST000180
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000155. The data can be accessed directly via it's Project DOI: 10.21228/M82G6M This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
Study ID | ST000180 |
Study Title | 2 lines of pulmonary artery smooth muscle cells metabolic profile (122 vs 3633C central metabolic profile) |
Study Type | Glycolysis/TCA/Nucleotide analysis (tissue/cells) |
Study Summary | 2 lines of pulmonary artery smooth muscle cells which has been snap frozen during active growth phase |
Institute | University of Michigan |
Department | Biomedical Research Core Facilities |
Laboratory | Metabolomics core |
Last Name | Kachman |
First Name | Maureen |
Address | 6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714 |
mkachman@umich.edu | |
Submit Date | 2015-06-06 |
Num Groups | 2 |
Total Subjects | 10 |
Raw Data Available | Yes |
Raw Data File Type(s) | d |
Uploaded File Size | 1.5 G |
Analysis Type Detail | LC-MS |
Release Date | 2016-06-18 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Project:
Project ID: | PR000155 |
Project DOI: | doi: 10.21228/M82G6M |
Project Title: | PASMC metabolism |
Project Summary: | Comparison of metabolic attributes of vascular smooth muscle cells |
Institute: | University of California, San Francisco |
Department: | Pediatrics |
Laboratory: | Maltepe Lab |
Last Name: | Maltepe |
First Name: | Emin |
Address: | San Francisco, CA |
Email: | Emin.Maltepe@ucsf.edu |
Phone: | 415-476-9313 |
Subject:
Subject ID: | SU000199 |
Subject Type: | Animal |
Subject Species: | Ovis aries |
Taxonomy ID: | 9940 |
Species Group: | Mammal |
Factors:
Subject type: Animal; Subject species: Ovis aries (Factor headings shown in green)
mb_sample_id | local_sample_id | Animal |
---|---|---|
SA009507 | S00015063 | control |
SA009508 | S00015064 | control |
SA009509 | S00015065 | control |
SA009510 | S00015066 | control |
SA009511 | S00015062 | control |
SA009512 | S00015061 | shunt |
SA009513 | S00015058 | shunt |
SA009514 | S00015059 | shunt |
SA009515 | S00015060 | shunt |
SA009516 | S00015057 | shunt |
Showing results 1 to 10 of 10 |
Collection:
Collection ID: | CO000186 |
Collection Summary: | - |
Sample Type: | Cells |
Treatment:
Treatment ID: | TR000206 |
Sample Preparation:
Sampleprep ID: | SP000200 |
Sampleprep Summary: | - |
Sampleprep Protocol Filename: | Gly-TCA-nucleotides_analysis_protocol-2015-03-09.docx |
Combined analysis:
Analysis ID | AN000278 |
---|---|
Analysis type | MS |
Chromatography type | HILIC |
Chromatography system | Agilent 1260 |
Column | Phenomenex Luna NH2 (150 x 1mm,3um) |
MS Type | ESI |
MS instrument type | QTOF |
MS instrument name | Agilent 6530 QTOF |
Ion Mode | NEGATIVE |
Units | pmol/µg protein |
Chromatography:
Chromatography ID: | CH000200 |
Methods ID: | AQM020 |
Methods Filename: | QTOF-002-HILIC-35min-1mm.m.zip |
Instrument Name: | Agilent 1260 |
Column Name: | Phenomenex Luna NH2 (150 x 1mm,3um) |
Chromatography Type: | HILIC |
MS:
MS ID: | MS000227 |
Analysis ID: | AN000278 |
Instrument Name: | Agilent 6530 QTOF |
Instrument Type: | QTOF |
MS Type: | ESI |
Ion Mode: | NEGATIVE |
Acquisition Parameters File: | Column1_solv1_jetstream+_grad9.m.zip |
Processing Parameters File: | EX00314-MassHunterQuant-GlyTCA-DataAnalysis-LCMS-Method.m.zip |