Metabolomics Structure Database

 
MW REGNO: 41435
Common Name:Norspermidine
Systematic Name:bis(3-aminopropyl)amine
RefMet Name:Norspermidine
Synonyms: [PubChem Synonyms]
Exact Mass:
131.1422 (neutral)    Calculate m/z:
Formula:C6H17N3
InChIKey:OTBHHUPVCYLGQO-UHFFFAOYSA-N
ClassyFire superclass:Organic nitrogen compounds [C0004707]
ClassyFire class:Organonitrogen compounds [C0000278]
ClassyFire subclass:Amines [C0002449]
ClassyFire direct parent:Dialkylamines [C0002228]
Massbank MS spectra:View MS spectra
NP-MRD NMR spectra:View NMR spectra
SMILES:NCCCNCCCN
Studies:Available studies (via RefMet name)

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External database links:

PubChem CID:5942
CHEBI ID:16841
HMDB ID:HMDB0011634
KEGG ID:C03375
Chemspider ID:5729
MetaCyc ID:NORSPERMIDINE
NP-MRD ID(NMR):NP0000688
EPA CompTox DB:DTXCID505440
Plant Metabolite Hub(Pmhub):MS000009682

Calculated physicochemical properties (?):

Heavy Atoms: 9  
Rings: 0  
Aromatic Rings: 0  
Rotatable Bonds: 6  
van der Waals Molecular volume: 145.36 Å3 molecule-1  
Toplogical Polar Sufrace Area: 64.07 Å2 molecule-1  
Hydrogen Bond Donors: 3  
Hydrogen Bond Acceptors: 0  
logP: 0.41  
Molar Refractivity: 42.17  
Fraction sp3 Carbons: 1.00  
sp3 Carbons: 6  

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y

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