Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for db/db WT ozone and air exposed mice (Study ST000815)

GC POSITIVE ION MODE (Analysis AN001291)

Metabolite	Structure	F1	F2	F3	F4
ophthalmate	ME219403	0.54	0.51	1.03	1.93
1-heptadecanoylglycerophosphocholine	ME219419	1.13	2.25	0.54	0.49
1-oleoylglycerophosphocholine	ME219422	1.69	1.22	0.73	0.31
2-stearoylglycerophosphocholine	ME219437	1.84	1.13	0.56	0.36
2-palmitoleoylglycerophosphocholine	ME219435	1.59	0.96	1.02	0.34
2-palmitoylglycerophosphocholine	ME219436	1.72	0.86	0.96	0.46
1-docosapentaenoylglycerophosphocholine	ME219418	1.53	1.03	0.61	0.55
1-palmitoylglycerophosphocholine	ME219424	1.54	1.06	0.92	0.48
adenosine 5^-monophosphate (AMP)	ME219448	1.56	1.09	0.79	0.56
1-stearoylglycerophosphocholine	ME219425	1.66	1.08	0.82	0.44
2-oleoylglycerophosphocholine	ME219434	1.67	1.02	0.72	0.52
1-docosahexaenoylglycerophosphocholine	ME219417	1.30	1.39	1.03	0.27
1-palmitoleoylglycerophosphocholine	ME219423	1.38	1.52	0.85	0.21
2-docosapentaenoylglycerophosphocholine	ME219430	1.46	1.20	0.76	0.22
1-linoleoylglycerophosphocholine	ME219420	1.45	1.06	1.14	0.27
2-docosahexaenoylglycerophosphocholine	ME219428	1.38	1.06	1.14	0.33
1-arachidonoylglycerophosphocholine	ME219415	1.55	1.11	1.02	0.23
2-docosapentaenoylglycerophosphoethanolamine	ME219431	1.51	1.28	1.00	0.25
heme	ME219412	1.22	0.72	1.46	0.42
3-ureidopropionate	ME219370	1.20	0.72	1.44	0.68
stearoylcarnitine	ME219378	1.18	0.63	1.36	0.76
stachydrine	ME219392	1.46	0.81	1.23	0.51
1-myristoylglycerophosphocholine	ME219421	1.52	0.81	1.18	0.32
2-myristoylglycerophosphocholine	ME219433	1.54	0.72	1.24	0.39
2-arachidonoylglycerophosphocholine	ME219426	1.26	1.07	1.29	0.29
2-linoleoylglycerophosphocholine	ME219432	1.13	1.17	1.33	0.31
cytidine-3^-monophosphate (3^-CMP)	ME219454	1.21	1.10	1.15	0.44
2-arachidonoylglycerophosphoethanolamine	ME219427	1.22	0.99	1.35	0.44
2-docosahexaenoylglycerophosphoethanolamine	ME219429	1.30	1.01	1.24	0.44
deoxycarnitine	ME219375	0.83	0.70	1.56	0.91
inosine 5^-monophosphate (IMP)	ME219446	1.40	1.50	0.66	0.50
pipecolate	ME219414	1.11	1.43	0.75	0.70
N-delta-acetylornithine	ME219469	1.08	1.33	0.77	0.82
sphinganine	ME219457	1.14	1.28	0.79	0.76
oleoylcarnitine	ME219376	1.47	0.89	0.86	0.75
palmitoylcarnitine	ME219377	1.44	0.76	1.03	0.73
2-methylbutyrylcarnitine (C5)	ME219471	1.31	1.08	1.04	0.57
isovalerylcarnitine	ME219475	1.37	1.14	0.99	0.50
guanosine 5^- monophosphate (5^-GMP)	ME219451	1.41	0.97	0.97	0.65
sphingosine	ME219458	1.40	1.00	0.95	0.60
taurine	ME219382	1.23	1.08	0.93	0.75
glycerophosphorylcholine (GPC)	ME219409	1.33	1.01	0.95	0.70
hydroxyisovaleroyl carnitine	ME219472	1.29	1.05	0.95	0.71
ergothioneine	ME219391	1.23	0.90	1.18	0.69
trigonelline (N^-methylnicotinate)	ME219440	1.22	1.00	1.13	0.65
1-arachidoylglycerophosphocholine	ME219416	1.17	0.88	0.95	0.78
N1-methyladenosine	ME219449	1.17	0.93	1.08	0.82
carnitine	ME219374	1.03	0.94	1.13	0.89
choline phosphate	ME219406	1.03	0.91	1.10	0.96
3-dehydrocarnitine	ME219372	0.93	0.95	1.18	0.94
betaine	ME219410	0.96	1.01	1.11	0.92
methionine sulfoxide	ME219381	0.95	1.04	1.15	0.87
acetylcarnitine	ME219373	0.92	0.89	1.14	1.05
butyrylcarnitine	ME219388	0.90	0.88	1.21	1.01
kynurenine	ME219462	0.90	0.85	1.19	1.05
gamma-glutamylthreonine	ME219397	0.81	1.00	1.16	1.03
guanosine	ME219450	0.79	0.93	1.17	1.11
gamma-glutamylglutamate	ME219393	0.77	0.82	1.32	1.09
propionylcarnitine	ME219390	0.84	0.89	1.31	0.96
corticosterone	ME219459	0.80	1.16	0.94	1.03
spermidine	ME219445	0.82	1.04	1.00	1.14
creatine	ME219379	0.92	1.04	0.98	1.05
threonine	ME219411	0.89	1.09	0.98	1.04
gamma-glutamylphenylalanine	ME219396	0.95	0.99	0.89	1.17
glutamine	ME219399	0.90	1.14	0.80	1.17
isobutyrylcarnitine	ME219473	1.13	1.15	1.04	0.68
S-methylglutathione	ME219404	1.11	1.16	0.97	0.76
adenosine	ME219447	1.01	1.03	1.17	0.79
5-aminovalerate	ME219464	1.02	1.12	1.09	0.75
cysteine-glutathione disulfide	ME219400	1.06	1.10	1.11	0.74
glycylproline	ME219384	1.07	1.14	0.82	0.97
homocitrulline	ME219468	1.00	1.16	0.84	0.98
cytidine	ME219452	0.94	1.25	0.87	0.95
Isobar: UDP-acetylglucosamine, UDP-acetylgalactosamine	ME219371	0.98	1.22	0.86	0.93
glutathione, oxidized (GSSG)	ME219401	1.03	1.21	0.89	0.88
pantothenate	ME219441	1.08	1.20	0.86	0.86
biopterin	ME219460	0.95	1.17	1.04	0.86
5-methylthioadenosine (MTA)	ME219444	1.15	1.14	0.82	0.90
glycylleucine	ME219383	1.13	1.11	0.84	0.92
isoleucine	ME219474	1.07	1.14	0.90	0.88
succinylcarnitine	ME219413	1.08	1.12	0.94	0.85
valine	ME219477	1.09	1.12	0.92	0.87
cytidine 5^-diphosphocholine	ME219407	1.17	1.05	0.91	0.86
cytidine-5^-diphosphoethanolamine	ME219408	1.14	1.08	0.94	0.84
phenylalanine	ME219442	1.14	1.08	0.91	0.88
uridine monophosphate (5^ or 3^)	ME219455	1.13	1.09	0.91	0.87
nicotinamide adenine dinucleotide (NAD+)	ME219439	1.02	1.06	1.06	0.86
nicotinamide	ME219438	1.12	1.01	0.98	0.89
C-glycosyltryptophan	ME219461	1.08	1.08	0.97	0.87
prostaglandin I2	ME219387	1.08	1.08	1.00	0.83
gamma-glutamylleucine	ME219395	1.09	1.02	1.04	0.85
choline	ME219405	1.06	1.05	1.00	0.89
riboflavin (Vitamin B2)	ME219456	1.05	1.03	1.01	0.90
pro-hydroxy-pro	ME219385	1.06	1.05	0.96	0.93
leucine	ME219476	1.04	1.11	0.94	0.92
tyrosine	ME219443	1.04	1.08	0.96	0.92
prolylproline	ME219386	1.02	1.13	0.97	0.89
proline	ME219470	0.99	1.12	0.95	0.94
tryptophan	ME219463	0.98	1.11	0.97	0.94
dimethylarginine (SDMA + ADMA)	ME219467	0.97	1.11	0.91	1.00
gamma-glutamyltyrosine	ME219398	0.96	1.07	1.02	0.95
cytidine 5^-monophosphate (5^-CMP)	ME219453	0.97	1.06	0.95	1.02
arginine	ME219465	0.99	1.05	0.98	0.99
methionine	ME219380	0.99	1.08	0.97	0.97
hydroxybutyrylcarnitine	ME219389	1.00	1.31	0.55	1.14
citrulline	ME219466	0.65	1.25	0.68	1.42
gamma-glutamylglutamine	ME219394	0.70	1.03	0.87	1.39
glutathione, reduced (GSH)	ME219402	0.56	1.13	0.87	1.44

Factors:

F1	Genotype:db/db \| exposure:air
F2	Genotype:db/db \| exposure:ozone
F3	Genotype:WT \| exposure:air
F4	Genotype:WT \| exposure:ozone

Data matrix