Clustering data with heatmap algorithm for Impact of anesthesia and euthanasia on metabolomics of mammalian tissues: studies in a C57BL/6J mouse model (Study ST000121)

This analysis uses the 'heatmap.2' function of gplots package in the R statistics environment


The rows are scaled to have mean=0 and standard deviation=1

Factors:

F1Tissue:Epididymal white adipose (fat) | Anesthesia / Euthanasia method:Carbon Dioxide
F2Tissue:Epididymal white adipose (fat) | Anesthesia / Euthanasia method:Cervical Dislocation
F3Tissue:Epididymal white adipose (fat) | Anesthesia / Euthanasia method:Continuous isoflurane
F4Tissue:Epididymal white adipose (fat) | Anesthesia / Euthanasia method:Isoflurane overdose
F5Tissue:Epididymal white adipose (fat) | Anesthesia / Euthanasia method:Ketamine
F6Tissue:Epididymal white adipose (fat) | Anesthesia / Euthanasia method:Pentobarbital
F7Tissue:Gastrocnemius (skeletal muscle) | Anesthesia / Euthanasia method:Carbon Dioxide
F8Tissue:Gastrocnemius (skeletal muscle) | Anesthesia / Euthanasia method:Cervical Dislocation
F9Tissue:Gastrocnemius (skeletal muscle) | Anesthesia / Euthanasia method:Continuous isoflurane
F10Tissue:Gastrocnemius (skeletal muscle) | Anesthesia / Euthanasia method:Isoflurane overdose
F11Tissue:Gastrocnemius (skeletal muscle) | Anesthesia / Euthanasia method:Ketamine
F12Tissue:Gastrocnemius (skeletal muscle) | Anesthesia / Euthanasia method:Pentobarbital
F13Tissue:Heart | Anesthesia / Euthanasia method:Carbon Dioxide
F14Tissue:Heart | Anesthesia / Euthanasia method:Cervical Dislocation
F15Tissue:Heart | Anesthesia / Euthanasia method:Continuous isoflurane
F16Tissue:Heart | Anesthesia / Euthanasia method:Isoflurane overdose
F17Tissue:Heart | Anesthesia / Euthanasia method:Ketamine
F18Tissue:Heart | Anesthesia / Euthanasia method:Pentobarbital
F19Tissue:Liver | Anesthesia / Euthanasia method:Carbon Dioxide
F20Tissue:Liver | Anesthesia / Euthanasia method:Cervical Dislocation
F21Tissue:Liver | Anesthesia / Euthanasia method:Continuous isoflurane
F22Tissue:Liver | Anesthesia / Euthanasia method:Isoflurane overdose
F23Tissue:Liver | Anesthesia / Euthanasia method:Ketamine
F24Tissue:Liver | Anesthesia / Euthanasia method:Pentobarbital
F25Tissue:Serum | Anesthesia / Euthanasia method:Carbon Dioxide
F26Tissue:Serum | Anesthesia / Euthanasia method:Cervical Dislocation
F27Tissue:Serum | Anesthesia / Euthanasia method:Continuous isoflurane
F28Tissue:Serum | Anesthesia / Euthanasia method:Isoflurane overdose
F29Tissue:Serum | Anesthesia / Euthanasia method:Ketamine
F30Tissue:Serum | Anesthesia / Euthanasia method:Pentobarbital
Data matrix
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