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MB Sample ID: SA205163
| Local Sample ID: | CB_VP_ARMII_064 |
| Subject ID: | SU002220 |
| Subject Type: | Human |
| Subject Species: | Homo sapiens |
| Taxonomy ID: | 9606 |
Select appropriate tab below to view additional metadata details:
Subject:
| Subject ID: | SU002220 |
| Subject Type: | Human |
| Subject Species: | Homo sapiens |
| Taxonomy ID: | 9606 |
Factors:
| Local Sample ID | MB Sample ID | Factor Level ID | Level Value | Factor Name |
|---|---|---|---|---|
| CB_VP_ARMII_064 | SA205163 | FL025166 | Umbilical cord blood | SampleType |
| CB_VP_ARMII_064 | SA205163 | FL025166 | 1 | BATCH |
| CB_VP_ARMII_064 | SA205163 | FL025166 | 1 | LIPIDOMICS_BATCH |
Collection:
| Collection ID: | CO002213 |
| Collection Summary: | Standard blood plasma collection protocol |
| Sample Type: | Blood (plasma) |
Treatment:
| Treatment ID: | TR002232 |
| Treatment Summary: | This is observational study |
Sample Preparation:
| Sampleprep ID: | SP002226 |
| Sampleprep Summary: | Standard MRC2 untargeted metabolomics and lipidomics sample preparation protocols |
| Sampleprep Protocol Filename: | araskind_20210615_101412_PR_SP_A004_Shotgun_Lipidomics.PDF araskind_20210611_105341_PR_SP_Untargeted_metabolomics_analysis.DOC |
Combined analysis:
| Analysis ID | AN003493 | AN003494 | AN003495 | AN003496 |
|---|---|---|---|---|
| Analysis type | MS | MS | MS | MS |
| Chromatography type | Reversed phase | Reversed phase | Reversed phase | Reversed phase |
| Chromatography system | Agilent 1290 Infinity II | Agilent 1290 Infinity II | Shimadzu Prominence UFLC | Shimadzu Prominence UFLC |
| Column | Waters Acquity BEH HSS T3 (100 x 2.1mm,1.8um) | Waters Acquity BEH HSS T3 (100 x 2.1mm,1.8um) | Waters Acquity BEH HSS T3 (100 x 2.1mm,1.8um) | Waters Acquity BEH HSS T3 (100 x 2.1mm,1.8um) |
| MS Type | ESI | ESI | ESI | ESI |
| MS instrument type | QTOF | QTOF | Triple TOF | Triple TOF |
| MS instrument name | Agilent 6545 QTOF | Agilent 6545 QTOF | ABI Sciex 5600+ TripleTOF | ABI Sciex 5600+ TripleTOF |
| Ion Mode | NEGATIVE | POSITIVE | NEGATIVE | POSITIVE |
| Units | Peak area | Peak area | Peak area, normalized | Peak area, normalized |
Chromatography:
| Chromatography ID: | CH002579 |
| Chromatography Summary: | Untargeted reverse phase negative mode |
| Instrument Name: | Agilent 1290 Infinity II |
| Column Name: | Waters Acquity BEH HSS T3 (100 x 2.1mm,1.8um) |
| Chromatography Type: | Reversed phase |
| Chromatography ID: | CH002580 |
| Chromatography Summary: | Untargeted reverse phase positive mode |
| Instrument Name: | Agilent 1290 Infinity II |
| Column Name: | Waters Acquity BEH HSS T3 (100 x 2.1mm,1.8um) |
| Chromatography Type: | Reversed phase |
| Chromatography ID: | CH002581 |
| Chromatography Summary: | Lipidomics reverse phase negative mode |
| Instrument Name: | Shimadzu Prominence UFLC |
| Column Name: | Waters Acquity BEH HSS T3 (100 x 2.1mm,1.8um) |
| Chromatography Type: | Reversed phase |
| Chromatography ID: | CH002582 |
| Chromatography Summary: | Lipidomics reverse phase positive mode |
| Instrument Name: | Shimadzu Prominence UFLC |
| Column Name: | Waters Acquity BEH HSS T3 (100 x 2.1mm,1.8um) |
| Chromatography Type: | Reversed phase |
MS:
| MS ID: | MS003253 |
| Analysis ID: | AN003493 |
| Instrument Name: | Agilent 6545 QTOF |
| Instrument Type: | QTOF |
| MS Type: | ESI |
| MS Comments: | Acquisition method RP Neg Untargeted_2016_460ulmin_Agilent.m, Processing in Agilent Qual/MPP followed by in-house scripts |
| Ion Mode: | NEGATIVE |
| MS ID: | MS003254 |
| Analysis ID: | AN003494 |
| Instrument Name: | Agilent 6545 QTOF |
| Instrument Type: | QTOF |
| MS Type: | ESI |
| MS Comments: | Acquisition method: RP Pos Untargeted_2016_Agilent_460ulmin_2mm.m, Processing in Agilent Qual/MPP followed by in-house scripts |
| Ion Mode: | POSITIVE |
| MS ID: | MS003255 |
| Analysis ID: | AN003495 |
| Instrument Name: | ABI Sciex 5600+ TripleTOF |
| Instrument Type: | Triple TOF |
| MS Type: | ESI |
| MS Comments: | Acquisition method LIP_15min_MSMS_Jenny_New_20min_Negative.dam, Processing in Sciex proprietary software followed by in-house scripts |
| Ion Mode: | NEGATIVE |
| MS ID: | MS003256 |
| Analysis ID: | AN003496 |
| Instrument Name: | ABI Sciex 5600+ TripleTOF |
| Instrument Type: | Triple TOF |
| MS Type: | ESI |
| MS Comments: | Acquisition method LIP_15min_MSMS_Jenny_new_20min_Positive.dam, Processing in Sciex proprietary software followed by in-house scripts |
| Ion Mode: | POSITIVE |
