Tools: Overview

Load and analyze your own database

Analyse NIH Metabolomics Data Repository studies

MS Searches

  • MS Searches: Precursor ion searches on metabolite and lipid databases in single or batch mode.

REST Service

  • REST Service: The Metabolomics WorkBench REST service enables access to a variety of data (including metabolite structures, study metadata and experimental results) using HTTP requests.

Docker tools

  • MSCAT: A dockerized application developed by the group led by Katerina Kechris and Debashis Ghosh at the University of Colorado Anschutz Medical Campus in conjunction with the Metabolomics Workbench. The application provides a database of metabolomics software tools and allows one to generate potential software workflows using an online interface.

External Tools