Summary of Study ST003187
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001807. The data can be accessed directly via it's Project DOI: 10.21228/M84Q6N This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST003187 |
Study Title | Untargeted plasma metabolomics on bacterial culture supernatants |
Study Summary | As part of our pipeline to identify microbial metabolites in bloodstream infections, we performed untargeted metabolomics on bacterial cell culture supernatants. We focused on metabolites that were significantly altered in both our human cohort (PR001807) and mouse model of bloodstream infection. Bacteria were grown either in rich media (LB) or minimal media (M9) + 0.4% glucose + 0.2% CAS-amino acids |
Institute | Harvard University |
Last Name | Mayers |
First Name | Jared |
Address | 12 Oxford St Conant 200S Cambridge, MA 02138 |
jrmayers@gmail.com | |
Phone | 4259417747 |
Submit Date | 2024-04-29 |
Raw Data Available | Yes |
Raw Data File Type(s) | mzML |
Analysis Type Detail | LC-MS |
Release Date | 2024-05-17 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Combined analysis:
Analysis ID | AN005235 |
---|---|
Analysis type | MS |
Chromatography type | HILIC |
Chromatography system | Agilent 1260 Infinity HPLC |
Column | Waters Atlantis HILIC (150 x 2.1mm,3um) |
MS Type | ESI |
MS instrument type | QTOF |
MS instrument name | Agilent 6530 QTOF |
Ion Mode | POSITIVE |
Units | ion counts |
Chromatography:
Chromatography ID: | CH003962 |
Instrument Name: | Agilent 1260 Infinity HPLC |
Column Name: | Waters Atlantis HILIC (150 x 2.1mm,3um) |
Column Temperature: | 30 |
Flow Gradient: | 0.5 minute at 5% mobile phase B followed by a linear gradient to 40% mobile phase B over 10 minutes and then maintained isocratically for 4.5 minutes before returning to 5% mobile phase B by gradient over 2 minutes |
Flow Rate: | 250 μL/min |
Solvent A: | 100% water; 0.1% formic acid |
Solvent B: | 100% acetonitrile; 0.1% formic acid |
Chromatography Type: | HILIC |