Summary of Study ST000119
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000106. The data can be accessed directly via it's Project DOI: 10.21228/M8RC75 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
Study ID | ST000119 |
Study Title | Metabolomics analysis of multiple metabolic functions in the YjgF/YER057c/UK114 (Rid) protein family LCMS |
Study Type | wildtype vs knock-out |
Study Summary | Metabolomics analysis of wild-type S. enterica, single RidA knock-out and triple Rid (ridA Rid2 Rid7) knock-out S.enterica cells |
Institute | University of California, Davis |
Department | Genome and Biomedical Sciences Facility |
Laboratory | Fiehn Laboratory |
Last Name | ElBadawi-Sidhu |
First Name | Mona |
Address | 451 Health Sciences Drive, Davis, California 95616, USA |
mmelbadawi@ucdavis.edu | |
Submit Date | 2014-11-06 |
Num Groups | 4 |
Total Subjects | 6 |
Study Comments | Samples were measured in poitive and negative ionization mode. MS/MS files contain product ion scans (MS/MS) spectra for compound identification. |
Raw Data Available | No |
Raw Data File Type(s) | d |
Analysis Type Detail | LC-MS |
Release Date | 2014-11-06 |
Release Version | 1 |
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Factors:
Subject type: Bacterial cells; Subject species: Salmonella enterica;Escherichia coli (Factor headings shown in green)
mb_sample_id | local_sample_id | Strain | Genotype |
---|---|---|---|
SA006213 | 041113_EcoliCells_WT_R1_0005 | E.coli | Wild-type |
SA006214 | 041113_EcoliCells_WT_R2_0060 | E.coli | Wild-type |
SA006215 | 041113_EcoliCells_WT_Pool_MSMS_0064 | E.coli | Wild-type |
SA006216 | 041113_EcoliCells_WT_R3_0044 | E.coli | Wild-type |
SA006217 | 041113_EcoliCells_WT_R4_0034 | E.coli | Wild-type |
SA006218 | 041113_EcoliCells_WT_R6_0023 | E.coli | Wild-type |
SA006219 | 041113_EcoliCells_WT_R5_0037 | E.coli | Wild-type |
SA006206 | 041113_EcoliCells_Yjef_R4_0038 | E.coli | Δyjef Knock-out |
SA006207 | 041113_EcoliCells_Yjef_R5_0042 | E.coli | Δyjef Knock-out |
SA006208 | 041113_EcoliCells_Yjef_R6_0025 | E.coli | Δyjef Knock-out |
SA006209 | 041113_EcoliCells_Yjef_R2_0059 | E.coli | Δyjef Knock-out |
SA006210 | 041113_EcoliCells_Yjef_Pool_MSMS_0066 | E.coli | Δyjef Knock-out |
SA006211 | 041113_EcoliCells_Yjef_R3_0011 | E.coli | Δyjef Knock-out |
SA006212 | 041113_EcoliCells_Yjef_R1_0049 | E.coli | Δyjef Knock-out |
SA006220 | 041213_SentericaCells_RidAKO_R6_0055 | S.enterica | RidA Knock-out |
SA006221 | 041113_SentericaCells_RidAKO_Pool_MSMS_0070 | S.enterica | RidA Knock-out |
SA006222 | 041213_SentericaCells_RidAKO_R3_0029 | S.enterica | RidA Knock-out |
SA006223 | 041213_SentericaCells_RidAKO_R4_0057 | S.enterica | RidA Knock-out |
SA006224 | 041213_SentericaCells_RidAKO_R5_0035 | S.enterica | RidA Knock-out |
SA006225 | 041213_SentericaCells_RidAKO_R2_0047 | S.enterica | RidA Knock-out |
SA006226 | 041213_SentericaCells_RidAKO_R1_0022 | S.enterica | RidA Knock-out |
SA006227 | 041113_SentericaCells_WT_Pool_MSMS_0068 | S.enterica | Wild-type |
SA006228 | 041213_SentericaCells_WT_R6_0050 | S.enterica | Wild-type |
SA006229 | 041213_SentericaCells_WT_R2_0058 | S.enterica | Wild-type |
SA006230 | 041213_SentericaCells_WT_R3_0043 | S.enterica | Wild-type |
SA006231 | 041213_SentericaCells_WT_R4_0021 | S.enterica | Wild-type |
SA006232 | 041213_SentericaCells_WT_R5_0019 | S.enterica | Wild-type |
SA006233 | 041213_SentericaCells_WT_R1_0048 | S.enterica | Wild-type |
Showing results 1 to 28 of 28 |