Summary of Study ST000561
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000412. The data can be accessed directly via it's Project DOI: 10.21228/M8SS33 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
Study ID | ST000561 |
Study Title | Exploring the link between genotype, phenotype and metabolome for tomato seed quality attributes |
Study Type | Tomato Seed Metabolites Profiling (dry seed and 6 hour imbibed seeds comparision) |
Study Summary | In this study the F8 population of 100 Recombinant Inbred Lines (RILs) obtained from a cross between Solanum lycopersicum X Solanum pimpinellifolium were intelligently allocated to two sub-populations optimized for the distribution of parental alleles using the R-procedure DesignGG (Li et al., 2009; Joosen et al., 2013); hence 50 RIL lines were used for dry seeds and 50 lines for 6h imbibed seeds |
Institute | Wageningen University & Research |
Department | Plant Physiology |
Laboratory | Wageningen Seed Lab, Lab |
Last Name | Ligterink |
First Name | Wilco |
Address | Droevendaalsesteeg 1, NL-6708 PB Wageningen, The Netherlands |
wilco.ligterink@wur.nl | |
Phone | 31 317 48 28 09 |
Submit Date | 2017-02-07 |
Num Groups | 1 |
Total Subjects | 100 |
Publications | Metabolomic analysis of tomato seed germination, Metabolomics DOI: 10.1007/s11306-017-1284-x |
Analysis Type Detail | GC-MS |
Release Date | 2017-10-25 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Plant; Subject species: Solanum lycopersicum (Factor headings shown in green)
mb_sample_id | local_sample_id | Treatment |
---|---|---|
SA028927 | 239 | 6hImbibedSeeds |
SA028928 | 241 | 6hImbibedSeeds |
SA028929 | 236 | 6hImbibedSeeds |
SA028930 | 235 | 6hImbibedSeeds |
SA028931 | 233 | 6hImbibedSeeds |
SA028932 | 242 | 6hImbibedSeeds |
SA028933 | 244 | 6hImbibedSeeds |
SA028934 | 255 | 6hImbibedSeeds |
SA028935 | 254 | 6hImbibedSeeds |
SA028936 | 250 | 6hImbibedSeeds |
SA028937 | 247 | 6hImbibedSeeds |
SA028938 | 232 | 6hImbibedSeeds |
SA028939 | 231 | 6hImbibedSeeds |
SA028940 | 215 | 6hImbibedSeeds |
SA028941 | 214 | 6hImbibedSeeds |
SA028942 | 213 | 6hImbibedSeeds |
SA028943 | 211 | 6hImbibedSeeds |
SA028944 | 221 | 6hImbibedSeeds |
SA028945 | 223 | 6hImbibedSeeds |
SA028946 | 229 | 6hImbibedSeeds |
SA028947 | 228 | 6hImbibedSeeds |
SA028948 | 225 | 6hImbibedSeeds |
SA028949 | 224 | 6hImbibedSeeds |
SA028950 | 256 | 6hImbibedSeeds |
SA028951 | 264 | 6hImbibedSeeds |
SA028952 | 292 | 6hImbibedSeeds |
SA028953 | 293 | 6hImbibedSeeds |
SA028954 | 291 | 6hImbibedSeeds |
SA028955 | 290 | 6hImbibedSeeds |
SA028956 | 288 | 6hImbibedSeeds |
SA028957 | 294 | 6hImbibedSeeds |
SA028958 | 297 | 6hImbibedSeeds |
SA028959 | 307 | 6hImbibedSeeds |
SA028960 | 305 | 6hImbibedSeeds |
SA028961 | 303 | 6hImbibedSeeds |
SA028962 | 301 | 6hImbibedSeeds |
SA028963 | 286 | 6hImbibedSeeds |
SA028964 | 285 | 6hImbibedSeeds |
SA028965 | 271 | 6hImbibedSeeds |
SA028966 | 270 | 6hImbibedSeeds |
SA028967 | 268 | 6hImbibedSeeds |
SA028968 | 209 | 6hImbibedSeeds |
SA028969 | 272 | 6hImbibedSeeds |
SA028970 | 278 | 6hImbibedSeeds |
SA028971 | 284 | 6hImbibedSeeds |
SA028972 | 283 | 6hImbibedSeeds |
SA028973 | 282 | 6hImbibedSeeds |
SA028974 | 281 | 6hImbibedSeeds |
SA028975 | 263 | 6hImbibedSeeds |
SA028976 | 206 | 6hImbibedSeeds |
SA028977 | 243 | DrySeeds |
SA028978 | 245 | DrySeeds |
SA028979 | 240 | DrySeeds |
SA028980 | 238 | DrySeeds |
SA028981 | 237 | DrySeeds |
SA028982 | 246 | DrySeeds |
SA028983 | 248 | DrySeeds |
SA028984 | 257 | DrySeeds |
SA028985 | 253 | DrySeeds |
SA028986 | 252 | DrySeeds |
SA028987 | 249 | DrySeeds |
SA028988 | 234 | DrySeeds |
SA028989 | 230 | DrySeeds |
SA028990 | 212 | DrySeeds |
SA028991 | 216 | DrySeeds |
SA028992 | 210 | DrySeeds |
SA028993 | 208 | DrySeeds |
SA028994 | 207 | DrySeeds |
SA028995 | 217 | DrySeeds |
SA028996 | 218 | DrySeeds |
SA028997 | 227 | DrySeeds |
SA028998 | 226 | DrySeeds |
SA028999 | 222 | DrySeeds |
SA029000 | 219 | DrySeeds |
SA029001 | 258 | DrySeeds |
SA029002 | 259 | DrySeeds |
SA029003 | 289 | DrySeeds |
SA029004 | 295 | DrySeeds |
SA029005 | 287 | DrySeeds |
SA029006 | 280 | DrySeeds |
SA029007 | 279 | DrySeeds |
SA029008 | 298 | DrySeeds |
SA029009 | 299 | DrySeeds |
SA029010 | 306 | DrySeeds |
SA029011 | 304 | DrySeeds |
SA029012 | 302 | DrySeeds |
SA029013 | 300 | DrySeeds |
SA029014 | 277 | DrySeeds |
SA029015 | 276 | DrySeeds |
SA029016 | 265 | DrySeeds |
SA029017 | 262 | DrySeeds |
SA029018 | 261 | DrySeeds |
SA029019 | 260 | DrySeeds |
SA029020 | 266 | DrySeeds |
SA029021 | 267 | DrySeeds |
SA029022 | 275 | DrySeeds |
SA029023 | 274 | DrySeeds |
SA029024 | 273 | DrySeeds |
SA029025 | 269 | DrySeeds |
SA029026 | 205 | DrySeeds |
Showing results 1 to 100 of 100 |