Summary of Study ST001302
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000883. The data can be accessed directly via it's Project DOI: 10.21228/M8JM4K This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
Study ID | ST001302 |
Study Title | Metabolome Profiling of a Fast-growing Cyanobacterium Synechococcus elongatus PCC 11801 under Diurnal Cycle |
Study Type | Measurement of relative metabolite pools under diurnal cycle using isotopic ratio method |
Study Summary | Experiments were carried out by growing Synechococcus elongatus PCC 11801 cells in multicultivators designed to provide sinusoidal light. The period was 14:10 (light-dark). The samples for metabolomics analysis were collected in the second diurnal cycle at an interval of 6 hours starting from 25th hour (25, 31, 37 and 43 hours). The light intensity amplitude was 600 µmole photons.m-2. s-1. Additionally samples were also collected using cells grown under continuous light illumination of 600 µmole photons.m-2. s-1 to compare the difference in metabolite levels compared to that in the diurnal cycle. |
Institute | Indian Institute of Technology Bombay |
Department | Department of Chemical Engineering |
Laboratory | Biosystems Engineering Lab |
Last Name | Wangikar |
First Name | Pramod P |
Address | Department of Chemical Engineering, Indian Institute of Technology Bombay, Powai, Mumbai, Maharashtra, India - 400076 |
wangikar@iitb.ac.in | |
Phone | +91 (22) 2576 7232 (o) |
Submit Date | 2020-01-06 |
Raw Data Available | Yes |
Raw Data File Type(s) | wiff |
Analysis Type Detail | LC-MS |
Release Date | 2020-10-11 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Bacteria; Subject species: Synechococcus elongatus PCC 11801 (Factor headings shown in green)
mb_sample_id | local_sample_id | Time (h) | Treatment Condition |
---|---|---|---|
SA094294 | 11801 LDC 25-HR BR2 IS IDA-1 | 25 | MORNING |
SA094295 | 11801 LDC 25-HR BR1 IS IDA-3 | 25 | MORNING |
SA094296 | 11801 LDC 25-HR BR1 IS IDA-2 | 25 | MORNING |
SA094297 | 11801 LDC 25-HR BR1 IS IDA-1 | 25 | MORNING |
SA094298 | 11801 LDC 25-HR BR2 IS IDA-2 | 25 | MORNING |
SA094299 | 11801 LDC 25-HR BR3 IS IDA-2 | 25 | MORNING |
SA094300 | 11801 LDC 25-HR BR3 IS IDA-1 | 25 | MORNING |
SA094301 | 11801 LDC 25-HR BR2 IS IDA-3 | 25 | MORNING |
SA094302 | 11801 LDC 25-HR BR3 IS IDA-3 | 25 | MORNING |
SA094303 | 11801 LDC 31-HR BR2 IS IDA-2 | 31 | MID-DAY |
SA094304 | 11801 LDC 31-HR BR1 IS IDA-3 | 31 | MID-DAY |
SA094305 | 11801 LDC 31-HR BR1 IS IDA-2 | 31 | MID-DAY |
SA094306 | 11801 LDC 31-HR BR1 IS IDA-1 | 31 | MID-DAY |
SA094307 | 11801 LDC 31-HR BR2 IS IDA-1 | 31 | MID-DAY |
SA094308 | 11801 LDC 31-HR BR2 IS IDA-3 | 31 | MID-DAY |
SA094309 | 11801 LDC 31-HR BR3 IS IDA-2 | 31 | MID-DAY |
SA094310 | 11801 LDC 31-HR BR3 IS IDA-1 | 31 | MID-DAY |
SA094311 | 11801 LDC 31-HR BR3 IS IDA-3 | 31 | MID-DAY |
SA094312 | 11801 LDC 37-HR BR2 IS IDA-2 | 37 | EVENING |
SA094313 | 11801 LDC 37-HR BR2 IS IDA-3 | 37 | EVENING |
SA094314 | 11801 LDC 37-HR BR3 IS IDA-1 | 37 | EVENING |
SA094315 | 11801 LDC 37-HR BR3 IS IDA-2 | 37 | EVENING |
SA094316 | 11801 LDC 37-HR BR2 IS IDA-1 | 37 | EVENING |
SA094317 | 11801 LDC 37-HR BR1 IS IDA-3 | 37 | EVENING |
SA094318 | 11801 LDC 37-HR BR1 IS IDA-1 | 37 | EVENING |
SA094319 | 11801 LDC 37-HR BR1 IS IDA-2 | 37 | EVENING |
SA094320 | 11801 LDC 37-HR BR3 IS IDA-3 | 37 | EVENING |
SA094321 | 11801 LDC 43-HR BR1 IS IDA-1 | 43 | MID-NIGHT |
SA094322 | 11801 LDC 43-HR BR2 IS IDA-3 | 43 | MID-NIGHT |
SA094323 | 11801 LDC 43-HR BR2 IS IDA-2 | 43 | MID-NIGHT |
SA094324 | 11801 LDC 43-HR BR2 IS IDA-1 | 43 | MID-NIGHT |
SA094325 | 11801 LDC 43-HR BR3 IS IDA-1 | 43 | MID-NIGHT |
SA094326 | 11801 LDC 43-HR BR3 IS IDA-2 | 43 | MID-NIGHT |
SA094327 | 11801 LDC 43-HR BR1 IS IDA-2 | 43 | MID-NIGHT |
SA094328 | 11801 LDC 43-HR BR3 IS IDA-3 | 43 | MID-NIGHT |
SA094329 | 11801 LDC 43-HR BR1 IS IDA-3 | 43 | MID-NIGHT |
SA094285 | 11801 600uE CLDC BR2 IS IDA-2 | - | CONTINUOUS LIGHT ILLUMINATION |
SA094286 | 11801 600uE CLDC BR2 IS IDA-1 | - | CONTINUOUS LIGHT ILLUMINATION |
SA094287 | 11801 600uE CLDC BR1 IS IDA-3 | - | CONTINUOUS LIGHT ILLUMINATION |
SA094288 | 11801 600uE CLDC BR1 IS IDA-1 | - | CONTINUOUS LIGHT ILLUMINATION |
SA094289 | 11801 600uE CLDC BR2 IS IDA-3 | - | CONTINUOUS LIGHT ILLUMINATION |
SA094290 | 11801 600uE CLDC BR3 IS IDA-2 | - | CONTINUOUS LIGHT ILLUMINATION |
SA094291 | 11801 600uE CLDC BR3 IS IDA-1 | - | CONTINUOUS LIGHT ILLUMINATION |
SA094292 | 11801 600uE CLDC BR3 IS IDA-3 | - | CONTINUOUS LIGHT ILLUMINATION |
SA094293 | 11801 600uE CLDC BR1 IS IDA-2 | - | CONTINUOUS LIGHT ILLUMINATION |
Showing results 1 to 45 of 45 |